RNA–Protein interactions for RNA: ENST00000508580.1

DDX4-208, Transcript of DEAD-box helicase 4, human

TSL 2

Gene DDX4, Length 600 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX4-208	ENST00000508580	ADAMTSL5	Q6ZMM2	481 aa		3.14	□□□□□ -1.91
DDX4-208	ENST00000508580	CRLF3	Q8IUI8	442 aa		3.14	□□□□□ -1.91
DDX4-208	ENST00000508580	ZBED8	Q8IZ13	594 aa		3.14	□□□□□ -1.91
DDX4-208	ENST00000508580	SPAG16	Q8N0X2	631 aa		3.14	□□□□□ -1.91
DDX4-208	ENST00000508580	NOXO1	Q8NFA2	376 aa		3.14	□□□□□ -1.91
DDX4-208	ENST00000508580	OR2L8	Q8NGY9	312 aa		3.14	□□□□□ -1.91
DDX4-208	ENST00000508580	OR4C3	Q8NH37	302 aa		3.14	□□□□□ -1.91
DDX4-208	ENST00000508580	RPLP0P6	Q8NHW5	317 aa		3.14	□□□□□ -1.91
DDX4-208	ENST00000508580	TFG	Q92734	400 aa	Predicted RBP	3.14	□□□□□ -1.91
DDX4-208	ENST00000508580	UFD1	Q92890	307 aa		3.14	□□□□□ -1.91
DDX4-208	ENST00000508580	BIRC7	Q96CA5	298 aa		3.14	□□□□□ -1.91
DDX4-208	ENST00000508580	RCHY1	Q96PM5	261 aa		3.14	□□□□□ -1.91
DDX4-208	ENST00000508580	FAM173A	Q9BQD7	235 aa		3.14	□□□□□ -1.91
DDX4-208	ENST00000508580	PARD6G	Q9BYG4	376 aa	Predicted RBP	3.14	□□□□□ -1.91
DDX4-208	ENST00000508580	REEP4	Q9H6H4	257 aa		3.14	□□□□□ -1.91
DDX4-208	ENST00000508580	ESM1	Q9NQ30	184 aa		3.14	□□□□□ -1.91
DDX4-208	ENST00000508580	WRAP73	Q9P2S5	460 aa	Predicted RBP	3.14	□□□□□ -1.91
DDX4-208	ENST00000508580	ASIC3	Q9UHC3	531 aa		3.14	□□□□□ -1.91
DDX4-208	ENST00000508580	CIDEB	Q9UHD4	219 aa		3.14	□□□□□ -1.91
DDX4-208	ENST00000508580	TMCO1	Q9UM00	188 aa		3.14	□□□□□ -1.91
DDX4-208	ENST00000508580	COPS3	Q9UNS2	423 aa		3.14	□□□□□ -1.91
DDX4-208	ENST00000508580	ERVW-1	Q9UQF0	538 aa		3.14	□□□□□ -1.91
DDX4-208	ENST00000508580	KCNIP3	Q9Y2W7	256 aa		3.14	□□□□□ -1.91
DDX4-208	ENST00000508580	YARS2	Q9Y2Z4	477 aa	Known RBP	3.14	□□□□□ -1.91
DDX4-208	ENST00000508580	PRSS21	Q9Y6M0	314 aa		3.14	□□□□□ -1.91
DDX4-208	ENST00000508580		V9GYY9	64 aa		3.14	□□□□□ -1.91
DDX4-208	ENST00000508580	UBN2	Q6ZU65	1347 aa		3.14	□□□□□ -1.91
DDX4-208	ENST00000508580	COL18A1	P39060	1754 aa		3.13	□□□□□ -1.91
DDX4-208	ENST00000508580		A0A0G2JLW4	131 aa		3.13	□□□□□ -1.91
DDX4-208	ENST00000508580		A0A1B0GTI1	187 aa		3.13	□□□□□ -1.91
DDX4-208	ENST00000508580	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	3.13	□□□□□ -1.91
DDX4-208	ENST00000508580	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	3.13	□□□□□ -1.91
DDX4-208	ENST00000508580	PP2D1	A8MPX8	630 aa		3.13	□□□□□ -1.91
DDX4-208	ENST00000508580	C11orf98	E9PRG8	122 aa		3.13	□□□□□ -1.91
DDX4-208	ENST00000508580	FCN1	O00602	326 aa		3.13	□□□□□ -1.91
DDX4-208	ENST00000508580	GOSR2	O14653	212 aa		3.13	□□□□□ -1.91
DDX4-208	ENST00000508580	PRMT5	O14744	637 aa	Predicted RBP	3.13	□□□□□ -1.91
DDX4-208	ENST00000508580	SURF4	O15260	269 aa		3.13	□□□□□ -1.91
DDX4-208	ENST00000508580	LYPD3	O95274	346 aa		3.13	□□□□□ -1.91
DDX4-208	ENST00000508580	OXSR1	O95747	527 aa	Predicted RBP	3.13	□□□□□ -1.91
DDX4-208	ENST00000508580	LDOC1	O95751	146 aa	Predicted RBP	3.13	□□□□□ -1.91
DDX4-208	ENST00000508580	RPLP0	P05388	317 aa	Known RBP	3.13	□□□□□ -1.91
DDX4-208	ENST00000508580	GPI	P06744	558 aa		3.13	□□□□□ -1.91
DDX4-208	ENST00000508580	SERPINA6	P08185	405 aa		3.13	□□□□□ -1.91
DDX4-208	ENST00000508580	RD3L	P0DJH9	198 aa		3.13	□□□□□ -1.91
DDX4-208	ENST00000508580	SMIM10L1	P0DMW3	83 aa		3.13	□□□□□ -1.91
DDX4-208	ENST00000508580	MGMT	P16455	207 aa		3.13	□□□□□ -1.91
DDX4-208	ENST00000508580	CALML3	P27482	149 aa		3.13	□□□□□ -1.91
DDX4-208	ENST00000508580	FGF9	P31371	208 aa	Predicted RBP	3.13	□□□□□ -1.91
DDX4-208	ENST00000508580	CEACAM8	P31997	349 aa	Predicted RBP	3.13	□□□□□ -1.91
DDX4-208	ENST00000508580	KDELR2	P33947	212 aa		3.13	□□□□□ -1.91
DDX4-208	ENST00000508580	PPP1R2	P41236	205 aa		3.13	□□□□□ -1.91
DDX4-208	ENST00000508580	YAP1	P46937	504 aa	Known RBP	3.13	□□□□□ -1.91
DDX4-208	ENST00000508580	CRISP1	P54107	249 aa		3.13	□□□□□ -1.91
DDX4-208	ENST00000508580	RIPK4	P57078	832 aa		3.13	□□□□□ -1.91
DDX4-208	ENST00000508580	MLF1	P58340	268 aa		3.13	□□□□□ -1.91
DDX4-208	ENST00000508580	ATP6V0D1	P61421	351 aa		3.13	□□□□□ -1.91
DDX4-208	ENST00000508580	VBP1	P61758	197 aa		3.13	□□□□□ -1.91
DDX4-208	ENST00000508580	IRX1	P78414	480 aa	Predicted RBP	3.13	□□□□□ -1.91
DDX4-208	ENST00000508580	PITPNA	Q00169	270 aa		3.13	□□□□□ -1.91
DDX4-208	ENST00000508580	ZNF33B	Q06732	778 aa		3.13	□□□□□ -1.91
DDX4-208	ENST00000508580	UAP1	Q16222	522 aa	Predicted RBP	3.13	□□□□□ -1.91
DDX4-208	ENST00000508580	COQ5	Q5HYK3	327 aa		3.13	□□□□□ -1.91
DDX4-208	ENST00000508580	WDR25	Q64LD2	544 aa	Predicted RBP	3.13	□□□□□ -1.91
DDX4-208	ENST00000508580	APOBEC3H	Q6NTF7	200 aa	Known RBP	3.13	□□□□□ -1.91
DDX4-208	ENST00000508580	PPP1R2P3	Q6NXS1	205 aa		3.13	□□□□□ -1.91
DDX4-208	ENST00000508580	CLEC18B	Q6UXF7	455 aa		3.13	□□□□□ -1.91
DDX4-208	ENST00000508580	LINC00336	Q6ZUF6	198 aa		3.13	□□□□□ -1.91
DDX4-208	ENST00000508580	STOX1	Q6ZVD7	989 aa		3.13	□□□□□ -1.91
DDX4-208	ENST00000508580	PRSS48	Q7RTY5	328 aa		3.13	□□□□□ -1.91
DDX4-208	ENST00000508580	SETD3	Q86TU7	594 aa	Predicted RBP	3.13	□□□□□ -1.91
DDX4-208	ENST00000508580	ISCA2	Q86U28	154 aa		3.13	□□□□□ -1.91
DDX4-208	ENST00000508580	BOD1L2	Q8IYS8	172 aa		3.13	□□□□□ -1.91
DDX4-208	ENST00000508580	MTURN	Q8N3F0	131 aa		3.13	□□□□□ -1.91
DDX4-208	ENST00000508580	LIX1	Q8N485	282 aa		3.13	□□□□□ -1.91
DDX4-208	ENST00000508580	CDRT4	Q8N9R6	151 aa		3.13	□□□□□ -1.91
DDX4-208	ENST00000508580	OR1S2	Q8NGQ3	325 aa		3.13	□□□□□ -1.91
DDX4-208	ENST00000508580	ZPLD1	Q8TCW7	415 aa		3.13	□□□□□ -1.91
DDX4-208	ENST00000508580	MRAP	Q8TCY5	172 aa		3.13	□□□□□ -1.91
DDX4-208	ENST00000508580	ZNRF4	Q8WWF5	429 aa		3.13	□□□□□ -1.91
DDX4-208	ENST00000508580	NEIL2	Q969S2	332 aa		3.13	□□□□□ -1.91
DDX4-208	ENST00000508580	PPP1R14B	Q96C90	147 aa		3.13	□□□□□ -1.91
DDX4-208	ENST00000508580	SMIM10	Q96HG1	83 aa		3.13	□□□□□ -1.91
DDX4-208	ENST00000508580	ZFP3	Q96NJ6	502 aa		3.13	□□□□□ -1.91
DDX4-208	ENST00000508580	TNFRSF13C	Q96RJ3	184 aa		3.13	□□□□□ -1.91
DDX4-208	ENST00000508580	TIMM29	Q9BSF4	260 aa		3.13	□□□□□ -1.91
DDX4-208	ENST00000508580	PITPNM3	Q9BZ71	974 aa		3.13	□□□□□ -1.91
DDX4-208	ENST00000508580	DERL2	Q9GZP9	239 aa		3.13	□□□□□ -1.91
DDX4-208	ENST00000508580	NAA50	Q9GZZ1	169 aa	Known RBP	3.13	□□□□□ -1.91
DDX4-208	ENST00000508580	NAT10	Q9H0A0	1025 aa	Known RBP	3.13	□□□□□ -1.91
DDX4-208	ENST00000508580	TUBB1	Q9H4B7	451 aa		3.13	□□□□□ -1.91
DDX4-208	ENST00000508580	WDR55	Q9H6Y2	383 aa	Predicted RBP	3.13	□□□□□ -1.91
DDX4-208	ENST00000508580	WDR54	Q9H977	334 aa		3.13	□□□□□ -1.91
DDX4-208	ENST00000508580	PATZ1	Q9HBE1	687 aa	Known RBP	3.13	□□□□□ -1.91
DDX4-208	ENST00000508580	RETN	Q9HD89	108 aa		3.13	□□□□□ -1.91
DDX4-208	ENST00000508580	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	3.13	□□□□□ -1.91
DDX4-208	ENST00000508580	SAMSN1	Q9NSI8	373 aa	Known RBP	3.13	□□□□□ -1.91
DDX4-208	ENST00000508580	INTS9	Q9NV88	658 aa	Known RBP	3.13	□□□□□ -1.91
DDX4-208	ENST00000508580	SLC39A1	Q9NY26	324 aa		3.13	□□□□□ -1.91
DDX4-208	ENST00000508580	TAS2R16	Q9NYV7	291 aa		3.13	□□□□□ -1.91

Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms