RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 TBRG1Q3YBR2 411 aa17.62■□□□□ 0.41
USP53-203ENST00000507597 SLC36A2Q495M3 483 aa17.62■□□□□ 0.41
USP53-203ENST00000507597 SLC35D3Q5M8T2 416 aa17.62■□□□□ 0.41
USP53-203ENST00000507597 WDFY1Q8IWB7 410 aa17.62■□□□□ 0.41
USP53-203ENST00000507597 CYB561A3Q8NBI2 242 aa17.62■□□□□ 0.41
USP53-203ENST00000507597 OR10H5Q8NGA6 315 aa17.62■□□□□ 0.41
USP53-203ENST00000507597 BCL2L2Q92843 193 aaPredicted RBP17.62■□□□□ 0.41
USP53-203ENST00000507597 S100PBPQ96BU1 408 aa17.62■□□□□ 0.41
USP53-203ENST00000507597 SPOCK3Q9BQ16 436 aa17.62■□□□□ 0.41
USP53-203ENST00000507597 FAM118AQ9NWS6 357 aa17.62■□□□□ 0.41
USP53-203ENST00000507597 COA3Q9Y2R0 106 aaPredicted RBP17.62■□□□□ 0.41
USP53-203ENST00000507597 GCN1Q92616 2671 aaKnown RBP17.62■□□□□ 0.41
USP53-203ENST00000507597 ARPC4-TTLL3A0A0A6YYG9 625 aa17.61■□□□□ 0.41
USP53-203ENST00000507597 SH3D21A4FU49 640 aa17.61■□□□□ 0.41
USP53-203ENST00000507597 PRODHO43272 600 aa17.61■□□□□ 0.41
USP53-203ENST00000507597 TLX2O43763 284 aaPredicted RBP17.61■□□□□ 0.41
USP53-203ENST00000507597 HLA-DQA2P01906 255 aa17.61■□□□□ 0.41
USP53-203ENST00000507597 CTLA4P16410 223 aa17.61■□□□□ 0.41
USP53-203ENST00000507597 ZNF823P16415 610 aa17.61■□□□□ 0.41
USP53-203ENST00000507597 MSR1P21757 451 aa17.61■□□□□ 0.41
USP53-203ENST00000507597 FMO3P31513 532 aa17.61■□□□□ 0.41
USP53-203ENST00000507597 POLR2IP36954 125 aaKnown RBP17.61■□□□□ 0.41
USP53-203ENST00000507597 PTDSS1P48651 473 aaKnown RBP17.61■□□□□ 0.41
USP53-203ENST00000507597 PPA1Q15181 289 aa17.61■□□□□ 0.41
USP53-203ENST00000507597 ZNF362Q5T0B9 420 aaPredicted RBP17.61■□□□□ 0.41
USP53-203ENST00000507597 TMEM53Q6P2H8 277 aa17.61■□□□□ 0.41
USP53-203ENST00000507597 CXXC5Q7LFL8 322 aaKnown RBP17.61■□□□□ 0.41
USP53-203ENST00000507597 SLC16A14Q7RTX9 510 aa17.61■□□□□ 0.41
USP53-203ENST00000507597 GID4Q8IVV7 300 aa17.61■□□□□ 0.41
USP53-203ENST00000507597 DMRTC2Q8IXT2 367 aaPredicted RBP17.61■□□□□ 0.41
USP53-203ENST00000507597 TCEANCQ8N8B7 351 aa17.61■□□□□ 0.41
USP53-203ENST00000507597 SETD9Q8NE22 299 aa17.61■□□□□ 0.41
USP53-203ENST00000507597 FAM81AQ8TBF8 368 aa17.61■□□□□ 0.41
USP53-203ENST00000507597 TMEM163Q8TC26 289 aa17.61■□□□□ 0.41
USP53-203ENST00000507597 FAM222BQ8WU58 562 aa17.61■□□□□ 0.41
USP53-203ENST00000507597 KCNG2Q9UJ96 466 aa17.61■□□□□ 0.41
USP53-203ENST00000507597 A0A096LPE4 126 aa17.6■□□□□ 0.41
USP53-203ENST00000507597 A0A1W2PPZ6 126 aa17.6■□□□□ 0.41
USP53-203ENST00000507597 C12orf71A8MTZ7 269 aa17.6■□□□□ 0.41
USP53-203ENST00000507597 H0YAE9 185 aa17.6■□□□□ 0.41
USP53-203ENST00000507597 GOSR1O95249 250 aa17.6■□□□□ 0.41
USP53-203ENST00000507597 PTHP01270 115 aa17.6■□□□□ 0.41
USP53-203ENST00000507597 EPHA2P29317 976 aa17.6■□□□□ 0.41
USP53-203ENST00000507597 ARR3P36575 388 aa17.6■□□□□ 0.41
USP53-203ENST00000507597 VHLP40337 213 aa17.6■□□□□ 0.41
USP53-203ENST00000507597 FOXG1P55316 489 aaPredicted RBP17.6■□□□□ 0.41
USP53-203ENST00000507597 LSM6P62312 80 aaKnown RBP17.6■□□□□ 0.41
USP53-203ENST00000507597 HSF2Q03933 536 aa17.6■□□□□ 0.41
USP53-203ENST00000507597 IL18R1Q13478 541 aa17.6■□□□□ 0.41
USP53-203ENST00000507597 LCN1P1Q5VSP4 162 aa17.6■□□□□ 0.41
USP53-203ENST00000507597 FAM27BQ5VT28 67 aa17.6■□□□□ 0.41
USP53-203ENST00000507597 MEDAGQ5VYS4 303 aa17.6■□□□□ 0.41
USP53-203ENST00000507597 MEX3BQ6ZN04 569 aaKnown RBP17.6■□□□□ 0.41
USP53-203ENST00000507597 FOXL2NBQ6ZUU3 175 aa17.6■□□□□ 0.41
USP53-203ENST00000507597 SYT9Q86SS6 491 aa17.6■□□□□ 0.41
USP53-203ENST00000507597 CPOQ8IVL8 374 aa17.6■□□□□ 0.41
USP53-203ENST00000507597 OR6V1Q8N148 313 aa17.6■□□□□ 0.41
USP53-203ENST00000507597 CYGBQ8WWM9 190 aa17.6■□□□□ 0.41
USP53-203ENST00000507597 RFKQ969G6 155 aa17.6■□□□□ 0.41
USP53-203ENST00000507597 ZNF837Q96EG3 531 aaPredicted RBP17.6■□□□□ 0.41
USP53-203ENST00000507597 Q96MT0 163 aa17.6■□□□□ 0.41
USP53-203ENST00000507597 DDOQ99489 341 aa17.6■□□□□ 0.41
USP53-203ENST00000507597 PITX2Q99697 317 aa17.6■□□□□ 0.41
USP53-203ENST00000507597 CDADC1Q9BWV3 514 aa17.6■□□□□ 0.41
USP53-203ENST00000507597 OR51V1Q9H2C8 321 aa17.6■□□□□ 0.41
USP53-203ENST00000507597 RNF121Q9H920 327 aa17.6■□□□□ 0.41
USP53-203ENST00000507597 CCNB1IP1Q9NPC3 277 aa17.6■□□□□ 0.41
USP53-203ENST00000507597 NPDC1Q9NQX5 325 aaPredicted RBP17.6■□□□□ 0.41
USP53-203ENST00000507597 NDRG4Q9ULP0 352 aaKnown RBP17.6■□□□□ 0.41
USP53-203ENST00000507597 A1L4Q6 167 aa17.59■□□□□ 0.41
USP53-203ENST00000507597 HRGP04196 525 aa17.59■□□□□ 0.41
USP53-203ENST00000507597 CST2P09228 141 aa17.59■□□□□ 0.41
USP53-203ENST00000507597 RNF224P0DH78 156 aa17.59■□□□□ 0.41
USP53-203ENST00000507597 EPXP11678 715 aa17.59■□□□□ 0.41
USP53-203ENST00000507597 COX6B1P14854 86 aa17.59■□□□□ 0.41
USP53-203ENST00000507597 B4GALT1P15291 398 aa17.59■□□□□ 0.41
USP53-203ENST00000507597 SPI1P17947 270 aa17.59■□□□□ 0.41
USP53-203ENST00000507597 RPS7P62081 194 aaKnown RBP17.59■□□□□ 0.41
USP53-203ENST00000507597 TSC22D1Q15714 1073 aa17.59■□□□□ 0.41
USP53-203ENST00000507597 KLHL12Q53G59 568 aa17.59■□□□□ 0.41
USP53-203ENST00000507597 NXNL2Q5VZ03 156 aa17.59■□□□□ 0.41
USP53-203ENST00000507597 SP5Q6BEB4 398 aaPredicted RBP17.59■□□□□ 0.41
USP53-203ENST00000507597 PLBD1Q6P4A8 553 aa17.59■□□□□ 0.41
USP53-203ENST00000507597 MBOAT4Q96T53 435 aa17.59■□□□□ 0.41
USP53-203ENST00000507597 NMNAT2Q9BZQ4 307 aa17.59■□□□□ 0.41
USP53-203ENST00000507597 POLE4Q9NR33 117 aa17.59■□□□□ 0.41
USP53-203ENST00000507597 POLR1DQ9Y2S0 133 aa17.59■□□□□ 0.41
USP53-203ENST00000507597 IGLV1-36A0A0B4J1U3 117 aa17.58■□□□□ 0.4
USP53-203ENST00000507597 IGKV1D-43A0A0B4J1Z2 117 aa17.58■□□□□ 0.4
USP53-203ENST00000507597 SLC22A31A6NKX4 558 aa17.58■□□□□ 0.4
USP53-203ENST00000507597 GLCEO94923 617 aa17.58■□□□□ 0.4
USP53-203ENST00000507597 RAB36O95755 333 aa17.58■□□□□ 0.4
USP53-203ENST00000507597 CD79AP11912 226 aa17.58■□□□□ 0.4
USP53-203ENST00000507597 GRNP28799 593 aaKnown RBP17.58■□□□□ 0.4
USP53-203ENST00000507597 PLP2Q04941 152 aa17.58■□□□□ 0.4
USP53-203ENST00000507597 TMED1Q13445 227 aa17.58■□□□□ 0.4
USP53-203ENST00000507597 SNCBQ16143 134 aa17.58■□□□□ 0.4
USP53-203ENST00000507597 HIKESHIQ53FT3 197 aa17.58■□□□□ 0.4
USP53-203ENST00000507597 ALDH16A1Q8IZ83 802 aa17.58■□□□□ 0.4
USP53-203ENST00000507597 FAM169BQ8N8A8 192 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms