RNA–Protein interactions for RNA: ENST00000507401.2

SCN1A-207, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 3

Gene SCN1A, Length 711 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-207ENST00000507401 TMEM234Q8WY98 164 aa7.14□□□□□ -1.27
SCN1A-207ENST00000507401 ST8SIA1Q92185 356 aa7.14□□□□□ -1.27
SCN1A-207ENST00000507401 PMM1Q92871 262 aa7.14□□□□□ -1.27
SCN1A-207ENST00000507401 CPNE4Q96A23 557 aaPredicted RBP7.14□□□□□ -1.27
SCN1A-207ENST00000507401 NEURL3Q96EH8 262 aa7.14□□□□□ -1.27
SCN1A-207ENST00000507401 OTUB1Q96FW1 271 aaPredicted RBP7.14□□□□□ -1.27
SCN1A-207ENST00000507401 KLHL15Q96M94 604 aa7.14□□□□□ -1.27
SCN1A-207ENST00000507401 CITED4Q96RK1 184 aa7.14□□□□□ -1.27
SCN1A-207ENST00000507401 DCLRE1CQ96SD1 692 aaKnown RBP7.14□□□□□ -1.27
SCN1A-207ENST00000507401 EPYCQ99645 322 aa7.14□□□□□ -1.27
SCN1A-207ENST00000507401 NPAS1Q99742 590 aa7.14□□□□□ -1.27
SCN1A-207ENST00000507401 HDHD5Q9BXW7 423 aa7.14□□□□□ -1.27
SCN1A-207ENST00000507401 ZNF350Q9GZX5 532 aa7.14□□□□□ -1.27
SCN1A-207ENST00000507401 LAT2Q9GZY6 243 aa7.14□□□□□ -1.27
SCN1A-207ENST00000507401 OPN3Q9H1Y3 402 aaPredicted RBP7.14□□□□□ -1.27
SCN1A-207ENST00000507401 SERHL2Q9H4I8 314 aa7.14□□□□□ -1.27
SCN1A-207ENST00000507401 NARFLQ9H6Q4 476 aa7.14□□□□□ -1.27
SCN1A-207ENST00000507401 SMURF1Q9HCE7 757 aa7.14□□□□□ -1.27
SCN1A-207ENST00000507401 EMC7Q9NPA0 242 aa7.14□□□□□ -1.27
SCN1A-207ENST00000507401 IL1RAPQ9NPH3 570 aa7.14□□□□□ -1.27
SCN1A-207ENST00000507401 KRT84Q9NSB2 600 aa7.14□□□□□ -1.27
SCN1A-207ENST00000507401 RBFOX1Q9NWB1 397 aaKnown RBP7.14□□□□□ -1.27
SCN1A-207ENST00000507401 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.14□□□□□ -1.27
SCN1A-207ENST00000507401 KIF25Q9UIL4 384 aa7.14□□□□□ -1.27
SCN1A-207ENST00000507401 ADAM30Q9UKF2 790 aa7.14□□□□□ -1.27
SCN1A-207ENST00000507401 ELF5Q9UKW6 265 aaPredicted RBP7.14□□□□□ -1.27
SCN1A-207ENST00000507401 LIPT1Q9Y234 373 aa7.14□□□□□ -1.27
SCN1A-207ENST00000507401 SETD2Q9BYW2 2564 aaPredicted RBP7.14□□□□□ -1.27
SCN1A-207ENST00000507401 TOR1AO14656 332 aa7.13□□□□□ -1.27
SCN1A-207ENST00000507401 TNFSF11O14788 317 aa7.13□□□□□ -1.27
SCN1A-207ENST00000507401 XPNPEP2O43895 674 aa7.13□□□□□ -1.27
SCN1A-207ENST00000507401 CPSF4O95639 269 aaKnown RBP7.13□□□□□ -1.27
SCN1A-207ENST00000507401 NUDT14O95848 222 aa7.13□□□□□ -1.27
SCN1A-207ENST00000507401 ANXA8P13928 327 aa7.13□□□□□ -1.27
SCN1A-207ENST00000507401 CD99P14209 185 aa7.13□□□□□ -1.27
SCN1A-207ENST00000507401 GADD45AP24522 165 aa7.13□□□□□ -1.27
SCN1A-207ENST00000507401 PSMA1P25786 263 aaKnown RBP7.13□□□□□ -1.27
SCN1A-207ENST00000507401 GTF2E2P29084 291 aaKnown RBP7.13□□□□□ -1.27
SCN1A-207ENST00000507401 TNFSF8P32971 234 aa7.13□□□□□ -1.27
SCN1A-207ENST00000507401 S100A3P33764 101 aa7.13□□□□□ -1.27
SCN1A-207ENST00000507401 SOAT1P35610 550 aa7.13□□□□□ -1.27
SCN1A-207ENST00000507401 SLC6A8P48029 635 aa7.13□□□□□ -1.27
SCN1A-207ENST00000507401 RFX2P48378 723 aa7.13□□□□□ -1.27
SCN1A-207ENST00000507401 RAG2P55895 527 aa7.13□□□□□ -1.27
SCN1A-207ENST00000507401 RAC3P60763 192 aa7.13□□□□□ -1.27
SCN1A-207ENST00000507401 RRAS2P62070 204 aaPredicted RBP7.13□□□□□ -1.27
SCN1A-207ENST00000507401 LSM3P62310 102 aaKnown RBP7.13□□□□□ -1.27
SCN1A-207ENST00000507401 SIRPAP78324 504 aa7.13□□□□□ -1.27
SCN1A-207ENST00000507401 HSF2Q03933 536 aa7.13□□□□□ -1.27
SCN1A-207ENST00000507401 IRF3Q14653 427 aa7.13□□□□□ -1.27
SCN1A-207ENST00000507401 GPR68Q15743 365 aa7.13□□□□□ -1.27
SCN1A-207ENST00000507401 TMEM176BQ3YBM2 270 aaPredicted RBP7.13□□□□□ -1.27
SCN1A-207ENST00000507401 FAM174BQ3ZCQ3 159 aa7.13□□□□□ -1.27
SCN1A-207ENST00000507401 RUNDC3AQ59EK9 446 aa7.13□□□□□ -1.27
SCN1A-207ENST00000507401 SPANXN4Q5MJ08 99 aa7.13□□□□□ -1.27
SCN1A-207ENST00000507401 DDI2Q5TDH0 399 aa7.13□□□□□ -1.27
SCN1A-207ENST00000507401 SAXO2Q658L1 398 aa7.13□□□□□ -1.27
SCN1A-207ENST00000507401 C16orf62Q7Z3J2 963 aa7.13□□□□□ -1.27
SCN1A-207ENST00000507401 SLC43A2Q8N370 569 aa7.13□□□□□ -1.27
SCN1A-207ENST00000507401 RNF128Q8TEB7 428 aa7.13□□□□□ -1.27
SCN1A-207ENST00000507401 XAGE5Q8WWM1 108 aa7.13□□□□□ -1.27
SCN1A-207ENST00000507401 SLC35G5Q96KT7 338 aa7.13□□□□□ -1.27
SCN1A-207ENST00000507401 Q96MT0 163 aa7.13□□□□□ -1.27
SCN1A-207ENST00000507401 ZNF583Q96ND8 569 aa7.13□□□□□ -1.27
SCN1A-207ENST00000507401 PIP5K1AQ99755 562 aa7.13□□□□□ -1.27
SCN1A-207ENST00000507401 MED18Q9BUE0 208 aa7.13□□□□□ -1.27
SCN1A-207ENST00000507401 SRRQ9GZT4 340 aa7.13□□□□□ -1.27
SCN1A-207ENST00000507401 OR51I1Q9H343 314 aa7.13□□□□□ -1.27
SCN1A-207ENST00000507401 IFT22Q9H7X7 185 aa7.13□□□□□ -1.27
SCN1A-207ENST00000507401 MTHFD2LQ9H903 347 aaPredicted RBP7.13□□□□□ -1.27
SCN1A-207ENST00000507401 SMURF2Q9HAU4 748 aa7.13□□□□□ -1.27
SCN1A-207ENST00000507401 BEX4Q9NWD9 120 aaPredicted RBP7.13□□□□□ -1.27
SCN1A-207ENST00000507401 KCNE5Q9UJ90 142 aa7.13□□□□□ -1.27
SCN1A-207ENST00000507401 SLC35A3Q9Y2D2 325 aa7.13□□□□□ -1.27
SCN1A-207ENST00000507401 PLEKHA6Q9Y2H5 1048 aa7.13□□□□□ -1.27
SCN1A-207ENST00000507401 GPR52Q9Y2T5 361 aa7.13□□□□□ -1.27
SCN1A-207ENST00000507401 CMAHPQ9Y471 501 aa7.13□□□□□ -1.27
SCN1A-207ENST00000507401 PRRC2AP48634 2157 aaKnown RBP7.13□□□□□ -1.27
SCN1A-207ENST00000507401 HEATR5AQ86XA9 2040 aa7.12□□□□□ -1.27
SCN1A-207ENST00000507401 NPIPA5A0A0B4J1W7 369 aa7.12□□□□□ -1.27
SCN1A-207ENST00000507401 A0A0G2JMP0 313 aa7.12□□□□□ -1.27
SCN1A-207ENST00000507401 IRGMA1A4Y4 181 aa7.12□□□□□ -1.27
SCN1A-207ENST00000507401 DEFB108AA8MXU0 73 aa7.12□□□□□ -1.27
SCN1A-207ENST00000507401 NPIPA7E9PJI5 369 aa7.12□□□□□ -1.27
SCN1A-207ENST00000507401 MYL12BO14950 172 aa7.12□□□□□ -1.27
SCN1A-207ENST00000507401 ADAM11O75078 769 aa7.12□□□□□ -1.27
SCN1A-207ENST00000507401 CSTAP01040 98 aa7.12□□□□□ -1.27
SCN1A-207ENST00000507401 OPN1LWP04000 364 aa7.12□□□□□ -1.27
SCN1A-207ENST00000507401 PGRP06401 933 aa7.12□□□□□ -1.27
SCN1A-207ENST00000507401 S100A6P06703 90 aa7.12□□□□□ -1.27
SCN1A-207ENST00000507401 NPIPA8P0DM63 369 aa7.12□□□□□ -1.27
SCN1A-207ENST00000507401 OR12D1P0DN82 309 aa7.12□□□□□ -1.27
SCN1A-207ENST00000507401 RRASP10301 218 aa7.12□□□□□ -1.27
SCN1A-207ENST00000507401 NCK1P16333 377 aa7.12□□□□□ -1.27
SCN1A-207ENST00000507401 MYL12AP19105 171 aa7.12□□□□□ -1.27
SCN1A-207ENST00000507401 PGCP20142 388 aa7.12□□□□□ -1.27
SCN1A-207ENST00000507401 RAB3AP20336 220 aa7.12□□□□□ -1.27
SCN1A-207ENST00000507401 PSMB1P20618 241 aaKnown RBP7.12□□□□□ -1.27
SCN1A-207ENST00000507401 ZP3P21754 424 aa7.12□□□□□ -1.27
SCN1A-207ENST00000507401 PPIBP23284 216 aaKnown RBP7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms