RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 C6orf203Q9P0P8 240 aaPredicted RBP4.2□□□□□ -1.74
HERC4-213ENST00000506515 SCML1Q9UN30 329 aa4.2□□□□□ -1.74
HERC4-213ENST00000506515 IFT52Q9Y366 437 aa4.2□□□□□ -1.74
HERC4-213ENST00000506515 PLXNB3Q9ULL4 1909 aa4.2□□□□□ -1.74
HERC4-213ENST00000506515 PLXND1Q9Y4D7 1925 aa4.2□□□□□ -1.74
HERC4-213ENST00000506515 PTPRBP23467 1997 aa4.2□□□□□ -1.74
HERC4-213ENST00000506515 COL12A1Q99715 3063 aa4.2□□□□□ -1.74
HERC4-213ENST00000506515 UNC79Q9P2D8 2635 aa4.19□□□□□ -1.74
HERC4-213ENST00000506515 KLLNB2CW77 178 aa4.19□□□□□ -1.74
HERC4-213ENST00000506515 TRDCB7Z8K6 153 aa4.19□□□□□ -1.74
HERC4-213ENST00000506515 RGS16O15492 202 aaPredicted RBP4.19□□□□□ -1.74
HERC4-213ENST00000506515 ZNF208O43345 1280 aa4.19□□□□□ -1.74
HERC4-213ENST00000506515 SCGNO76038 276 aa4.19□□□□□ -1.74
HERC4-213ENST00000506515 LDOC1O95751 146 aaPredicted RBP4.19□□□□□ -1.74
HERC4-213ENST00000506515 CCDC130P13994 396 aa4.19□□□□□ -1.74
HERC4-213ENST00000506515 NUDT1P36639 197 aa4.19□□□□□ -1.74
HERC4-213ENST00000506515 RBMXP38159 391 aaKnown RBP4.19□□□□□ -1.74
HERC4-213ENST00000506515 CASP4P49662 377 aa4.19□□□□□ -1.74
HERC4-213ENST00000506515 DUSP3P51452 185 aaPredicted RBP4.19□□□□□ -1.74
HERC4-213ENST00000506515 LYZP61626 148 aa4.19□□□□□ -1.74
HERC4-213ENST00000506515 PDK3Q15120 406 aa4.19□□□□□ -1.74
HERC4-213ENST00000506515 ZNF77Q15935 545 aa4.19□□□□□ -1.74
HERC4-213ENST00000506515 EXOC3L2Q2M3D2 409 aa4.19□□□□□ -1.74
HERC4-213ENST00000506515 UNQ9370/PRO34162Q6UXP9 181 aa4.19□□□□□ -1.74
HERC4-213ENST00000506515 FAM220AQ7Z4H9 259 aa4.19□□□□□ -1.74
HERC4-213ENST00000506515 CCDC65Q8IXS2 484 aa4.19□□□□□ -1.74
HERC4-213ENST00000506515 OR2L13Q8N349 312 aa4.19□□□□□ -1.74
HERC4-213ENST00000506515 ZNF557Q8N988 423 aaPredicted RBP4.19□□□□□ -1.74
HERC4-213ENST00000506515 PHYHIPLQ96FC7 376 aa4.19□□□□□ -1.74
HERC4-213ENST00000506515 TECTBQ96PL2 329 aa4.19□□□□□ -1.74
HERC4-213ENST00000506515 NPAS2Q99743 824 aa4.19□□□□□ -1.74
HERC4-213ENST00000506515 LSM7Q9UK45 103 aaKnown RBP4.19□□□□□ -1.74
HERC4-213ENST00000506515 POLDIP2Q9Y2S7 368 aa4.19□□□□□ -1.74
HERC4-213ENST00000506515 PTPRQQ9UMZ3 2332 aa4.19□□□□□ -1.74
HERC4-213ENST00000506515 DENND4CQ5VZ89 1909 aa4.19□□□□□ -1.74
HERC4-213ENST00000506515 ATMQ13315 3056 aa4.18□□□□□ -1.74
HERC4-213ENST00000506515 KIF26AQ9ULI4 1882 aaPredicted RBP4.18□□□□□ -1.74
HERC4-213ENST00000506515 CROCCQ5TZA2 2017 aa4.18□□□□□ -1.74
HERC4-213ENST00000506515 IGHV1OR15-9A0A0B4J2B8 117 aa4.18□□□□□ -1.74
HERC4-213ENST00000506515 TMX2-CTNND1H3BSU7 103 aa4.18□□□□□ -1.74
HERC4-213ENST00000506515 SGK1O00141 431 aa4.18□□□□□ -1.74
HERC4-213ENST00000506515 PIRO00625 290 aa4.18□□□□□ -1.74
HERC4-213ENST00000506515 POLR2DO15514 142 aaKnown RBP4.18□□□□□ -1.74
HERC4-213ENST00000506515 SLC37A4O43826 429 aa4.18□□□□□ -1.74
HERC4-213ENST00000506515 PFKFB2O60825 505 aa4.18□□□□□ -1.74
HERC4-213ENST00000506515 IGHV3-48P01763 117 aa4.18□□□□□ -1.74
HERC4-213ENST00000506515 HMGA1P17096 107 aaKnown RBP4.18□□□□□ -1.74
HERC4-213ENST00000506515 HTR1FP30939 366 aa4.18□□□□□ -1.74
HERC4-213ENST00000506515 CCT6AP40227 531 aaKnown RBP4.18□□□□□ -1.74
HERC4-213ENST00000506515 OPRD1P41143 372 aa4.18□□□□□ -1.74
HERC4-213ENST00000506515 HNRNPA3P51991 378 aaKnown RBP4.18□□□□□ -1.74
HERC4-213ENST00000506515 Q6ZPB1 254 aaPredicted RBP4.18□□□□□ -1.74
HERC4-213ENST00000506515 NLRP9Q7RTR0 991 aa4.18□□□□□ -1.74
HERC4-213ENST00000506515 VRK2Q86Y07 508 aa4.18□□□□□ -1.74
HERC4-213ENST00000506515 OR2L5Q8NG80 312 aa4.18□□□□□ -1.74
HERC4-213ENST00000506515 OR52I1Q8NGK6 324 aa4.18□□□□□ -1.74
HERC4-213ENST00000506515 ST8SIA1Q92185 356 aa4.18□□□□□ -1.74
HERC4-213ENST00000506515 EFHD2Q96C19 240 aaPredicted RBP4.18□□□□□ -1.74
HERC4-213ENST00000506515 SECISBP2Q96T21 854 aaKnown RBP4.18□□□□□ -1.74
HERC4-213ENST00000506515 CCT7Q99832 543 aa4.18□□□□□ -1.74
HERC4-213ENST00000506515 GABRG3Q99928 467 aa4.18□□□□□ -1.74
HERC4-213ENST00000506515 TMEM43Q9BTV4 400 aa4.18□□□□□ -1.74
HERC4-213ENST00000506515 MAGT1Q9H0U3 335 aa4.18□□□□□ -1.74
HERC4-213ENST00000506515 LINC00597Q9H2U6 94 aa4.18□□□□□ -1.74
HERC4-213ENST00000506515 SGK2Q9HBY8 427 aa4.18□□□□□ -1.74
HERC4-213ENST00000506515 SUN2Q9UH99 717 aa4.18□□□□□ -1.74
HERC4-213ENST00000506515 DCDC2Q9UHG0 476 aa4.18□□□□□ -1.74
HERC4-213ENST00000506515 PRPF19Q9UMS4 504 aaKnown RBP4.18□□□□□ -1.74
HERC4-213ENST00000506515 CCL26Q9Y258 94 aa4.18□□□□□ -1.74
HERC4-213ENST00000506515 ZNF256Q9Y2P7 627 aaPredicted RBP4.18□□□□□ -1.74
HERC4-213ENST00000506515 SPTAN1Q13813 2472 aaKnown RBP4.18□□□□□ -1.74
HERC4-213ENST00000506515 MGAQ8IWI9 3026 aa4.18□□□□□ -1.74
HERC4-213ENST00000506515 A0A0G2JRQ6 117 aa4.17□□□□□ -1.74
HERC4-213ENST00000506515 RIPK2O43353 540 aa4.17□□□□□ -1.74
HERC4-213ENST00000506515 ATP5LO75964 103 aa4.17□□□□□ -1.74
HERC4-213ENST00000506515 DIRAS1O95057 198 aa4.17□□□□□ -1.74
HERC4-213ENST00000506515 AP2A1O95782 977 aa4.17□□□□□ -1.74
HERC4-213ENST00000506515 IGLV3-19P01714 112 aa4.17□□□□□ -1.74
HERC4-213ENST00000506515 PRB1P04280 392 aa4.17□□□□□ -1.74
HERC4-213ENST00000506515 KRTAP1-4P0C5Y4 121 aa4.17□□□□□ -1.74
HERC4-213ENST00000506515 OR4Q2P0C623 313 aa4.17□□□□□ -1.74
HERC4-213ENST00000506515 NCK1P16333 377 aa4.17□□□□□ -1.74
HERC4-213ENST00000506515 GABRG2P18507 467 aa4.17□□□□□ -1.74
HERC4-213ENST00000506515 ATF6P18850 670 aa4.17□□□□□ -1.74
HERC4-213ENST00000506515 ATP6V1B2P21281 511 aa4.17□□□□□ -1.74
HERC4-213ENST00000506515 RPL13AP40429 203 aaKnown RBP4.17□□□□□ -1.74
HERC4-213ENST00000506515 HLCSP50747 726 aa4.17□□□□□ -1.74
HERC4-213ENST00000506515 AIF1P55008 147 aa4.17□□□□□ -1.74
HERC4-213ENST00000506515 RPS14P62263 151 aaKnown RBP4.17□□□□□ -1.74
HERC4-213ENST00000506515 ARL6IP1Q15041 203 aa4.17□□□□□ -1.74
HERC4-213ENST00000506515 NSUN5P1Q3KNT7 163 aa4.17□□□□□ -1.74
HERC4-213ENST00000506515 RUFY3Q7L099 469 aa4.17□□□□□ -1.74
HERC4-213ENST00000506515 LRRC52Q8N7C0 313 aa4.17□□□□□ -1.74
HERC4-213ENST00000506515 OR2AP1Q8NGE2 309 aa4.17□□□□□ -1.74
HERC4-213ENST00000506515 LINC01006Q8NI28 216 aa4.17□□□□□ -1.74
HERC4-213ENST00000506515 HTR3CQ8WXA8 447 aa4.17□□□□□ -1.74
HERC4-213ENST00000506515 ZIM3Q96PE6 472 aa4.17□□□□□ -1.74
HERC4-213ENST00000506515 RBM14Q96PK6 669 aaKnown RBP4.17□□□□□ -1.74
HERC4-213ENST00000506515 PSKH2Q96QS6 385 aa4.17□□□□□ -1.74
HERC4-213ENST00000506515 CCNL2Q96S94 520 aaPredicted RBP4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms