RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 LOC390937A0A1W2PQ73 354 aa14.34□□□□□ -0.11
PDLIM7-215ENST00000506161 NPIPB13A6NJU9 1138 aa14.34□□□□□ -0.11
PDLIM7-215ENST00000506161 NPIPB4C9JG80 1138 aa14.34□□□□□ -0.11
PDLIM7-215ENST00000506161 WNT9BO14905 357 aa14.34□□□□□ -0.11
PDLIM7-215ENST00000506161 COL8A2P25067 703 aa14.34□□□□□ -0.11
PDLIM7-215ENST00000506161 LSP1P33241 339 aa14.34□□□□□ -0.11
PDLIM7-215ENST00000506161 MSX2P35548 267 aaPredicted RBP14.34□□□□□ -0.11
PDLIM7-215ENST00000506161 RBMXP38159 391 aaKnown RBP14.34□□□□□ -0.11
PDLIM7-215ENST00000506161 WNT5AP41221 380 aa14.34□□□□□ -0.11
PDLIM7-215ENST00000506161 DAP3P51398 398 aaKnown RBP14.34□□□□□ -0.11
PDLIM7-215ENST00000506161 RPL27P61353 136 aaKnown RBP14.34□□□□□ -0.11
PDLIM7-215ENST00000506161 MRPS34P82930 218 aaKnown RBP14.34□□□□□ -0.11
PDLIM7-215ENST00000506161 CD47Q08722 323 aa14.34□□□□□ -0.11
PDLIM7-215ENST00000506161 SEC23BQ15437 767 aa14.34□□□□□ -0.11
PDLIM7-215ENST00000506161 PABPC1L2AQ5JQF8 200 aa14.34□□□□□ -0.11
PDLIM7-215ENST00000506161 AKR7LQ8NHP1 331 aa14.34□□□□□ -0.11
PDLIM7-215ENST00000506161 SLC7A13Q8TCU3 470 aa14.34□□□□□ -0.11
PDLIM7-215ENST00000506161 ACOT11Q8WXI4 607 aaPredicted RBP14.34□□□□□ -0.11
PDLIM7-215ENST00000506161 YIPF5Q969M3 257 aa14.34□□□□□ -0.11
PDLIM7-215ENST00000506161 FAM162AQ96A26 154 aa14.34□□□□□ -0.11
PDLIM7-215ENST00000506161 C7orf34Q96L11 122 aa14.34□□□□□ -0.11
PDLIM7-215ENST00000506161 GPA33Q99795 319 aa14.34□□□□□ -0.11
PDLIM7-215ENST00000506161 KCTD14Q9BQ13 255 aaPredicted RBP14.34□□□□□ -0.11
PDLIM7-215ENST00000506161 RAB1BQ9H0U4 201 aa14.34□□□□□ -0.11
PDLIM7-215ENST00000506161 DENND2DQ9H6A0 471 aaPredicted RBP14.34□□□□□ -0.11
PDLIM7-215ENST00000506161 ENPP4Q9Y6X5 453 aa14.34□□□□□ -0.11
PDLIM7-215ENST00000506161 LOC100509620A0A075B734 347 aa14.33□□□□□ -0.12
PDLIM7-215ENST00000506161 TRBV4-1A0A0J9YWV2 114 aa14.33□□□□□ -0.12
PDLIM7-215ENST00000506161 EFCAB9A8MZ26 197 aa14.33□□□□□ -0.12
PDLIM7-215ENST00000506161 CENPBD1B2RD01 187 aa14.33□□□□□ -0.12
PDLIM7-215ENST00000506161 GSTA4O15217 222 aa14.33□□□□□ -0.12
PDLIM7-215ENST00000506161 SAGP10523 405 aaPredicted RBP14.33□□□□□ -0.12
PDLIM7-215ENST00000506161 NAT2P11245 290 aa14.33□□□□□ -0.12
PDLIM7-215ENST00000506161 GIFP27352 417 aa14.33□□□□□ -0.12
PDLIM7-215ENST00000506161 ZNF84P51523 738 aa14.33□□□□□ -0.12
PDLIM7-215ENST00000506161 ERVK-25P63136 954 aa14.33□□□□□ -0.12
PDLIM7-215ENST00000506161 RIN1Q13671 783 aa14.33□□□□□ -0.12
PDLIM7-215ENST00000506161 ENDOGQ14249 297 aaKnown RBP14.33□□□□□ -0.12
PDLIM7-215ENST00000506161 MESTQ5EB52 335 aa14.33□□□□□ -0.12
PDLIM7-215ENST00000506161 CYB5R2Q6BCY4 276 aa14.33□□□□□ -0.12
PDLIM7-215ENST00000506161 UGT2A3Q6UWM9 527 aa14.33□□□□□ -0.12
PDLIM7-215ENST00000506161 THSD4Q6ZMP0 1018 aa14.33□□□□□ -0.12
PDLIM7-215ENST00000506161 MBOAT2Q6ZWT7 520 aa14.33□□□□□ -0.12
PDLIM7-215ENST00000506161 FKBP9P1Q75LS8 142 aa14.33□□□□□ -0.12
PDLIM7-215ENST00000506161 FAM122BQ7Z309 247 aa14.33□□□□□ -0.12
PDLIM7-215ENST00000506161 ZNF101Q8IZC7 436 aa14.33□□□□□ -0.12
PDLIM7-215ENST00000506161 UBASH3BQ8TF42 649 aa14.33□□□□□ -0.12
PDLIM7-215ENST00000506161 LZICQ8WZA0 190 aa14.33□□□□□ -0.12
PDLIM7-215ENST00000506161 FAM46AQ96IP4 442 aaKnown RBP14.33□□□□□ -0.12
PDLIM7-215ENST00000506161 Q96M85 177 aa14.33□□□□□ -0.12
PDLIM7-215ENST00000506161 FUZQ9BT04 418 aa14.33□□□□□ -0.12
PDLIM7-215ENST00000506161 WNT5BQ9H1J7 359 aa14.33□□□□□ -0.12
PDLIM7-215ENST00000506161 NMNAT1Q9HAN9 279 aaPredicted RBP14.33□□□□□ -0.12
PDLIM7-215ENST00000506161 ARL8BQ9NVJ2 186 aa14.33□□□□□ -0.12
PDLIM7-215ENST00000506161 NDUFAF4Q9P032 175 aa14.33□□□□□ -0.12
PDLIM7-215ENST00000506161 REV1Q9UBZ9 1251 aa14.33□□□□□ -0.12
PDLIM7-215ENST00000506161 V9GYQ6 96 aa14.33□□□□□ -0.12
PDLIM7-215ENST00000506161 M0R233 179 aa14.32□□□□□ -0.12
PDLIM7-215ENST00000506161 HAX1O00165 279 aa14.32□□□□□ -0.12
PDLIM7-215ENST00000506161 NDUFS8O00217 210 aa14.32□□□□□ -0.12
PDLIM7-215ENST00000506161 ATP8B1O43520 1251 aa14.32□□□□□ -0.12
PDLIM7-215ENST00000506161 SYNGR3O43761 229 aa14.32□□□□□ -0.12
PDLIM7-215ENST00000506161 SEMG1P04279 462 aa14.32□□□□□ -0.12
PDLIM7-215ENST00000506161 LAP3P28838 519 aa14.32□□□□□ -0.12
PDLIM7-215ENST00000506161 MAGEB1P43366 347 aa14.32□□□□□ -0.12
PDLIM7-215ENST00000506161 LIMS1P48059 325 aa14.32□□□□□ -0.12
PDLIM7-215ENST00000506161 PSG4Q00888 419 aa14.32□□□□□ -0.12
PDLIM7-215ENST00000506161 SGCAQ16586 387 aa14.32□□□□□ -0.12
PDLIM7-215ENST00000506161 NRN1LQ496H8 165 aa14.32□□□□□ -0.12
PDLIM7-215ENST00000506161 GKAP1Q5VSY0 366 aaPredicted RBP14.32□□□□□ -0.12
PDLIM7-215ENST00000506161 GLYATQ6IB77 296 aa14.32□□□□□ -0.12
PDLIM7-215ENST00000506161 TMEM53Q6P2H8 277 aa14.32□□□□□ -0.12
PDLIM7-215ENST00000506161 ZNF730Q6ZMV8 503 aa14.32□□□□□ -0.12
PDLIM7-215ENST00000506161 FOXL2NBQ6ZUU3 175 aa14.32□□□□□ -0.12
PDLIM7-215ENST00000506161 ZNF786Q8N393 782 aa14.32□□□□□ -0.12
PDLIM7-215ENST00000506161 NEU4Q8WWR8 484 aaPredicted RBP14.32□□□□□ -0.12
PDLIM7-215ENST00000506161 POM121L2Q96KW2 1035 aa14.32□□□□□ -0.12
PDLIM7-215ENST00000506161 SLC7A8Q9UHI5 535 aa14.32□□□□□ -0.12
PDLIM7-215ENST00000506161 DUSP13Q9UII6 198 aa14.32□□□□□ -0.12
PDLIM7-215ENST00000506161 AP3M1Q9Y2T2 418 aa14.32□□□□□ -0.12
PDLIM7-215ENST00000506161 IGLV3-9A0A075B6K5 115 aa14.31□□□□□ -0.12
PDLIM7-215ENST00000506161 PHF1O43189 567 aaPredicted RBP14.31□□□□□ -0.12
PDLIM7-215ENST00000506161 FARS2O95363 451 aaKnown RBP14.31□□□□□ -0.12
PDLIM7-215ENST00000506161 SNAP29O95721 258 aa14.31□□□□□ -0.12
PDLIM7-215ENST00000506161 TACSTD2P09758 323 aa14.31□□□□□ -0.12
PDLIM7-215ENST00000506161 APEHP13798 732 aaKnown RBP14.31□□□□□ -0.12
PDLIM7-215ENST00000506161 ZNF23P17027 643 aa14.31□□□□□ -0.12
PDLIM7-215ENST00000506161 PRDX6P30041 224 aa14.31□□□□□ -0.12
PDLIM7-215ENST00000506161 MPV17P39210 176 aa14.31□□□□□ -0.12
PDLIM7-215ENST00000506161 SLC9A3P48764 834 aa14.31□□□□□ -0.12
PDLIM7-215ENST00000506161 EVX1P49640 407 aa14.31□□□□□ -0.12
PDLIM7-215ENST00000506161 SRSF2Q01130 221 aaKnown RBP14.31□□□□□ -0.12
PDLIM7-215ENST00000506161 GALK2Q01415 458 aa14.31□□□□□ -0.12
PDLIM7-215ENST00000506161 GLO1Q04760 184 aa14.31□□□□□ -0.12
PDLIM7-215ENST00000506161 SLC36A2Q495M3 483 aa14.31□□□□□ -0.12
PDLIM7-215ENST00000506161 SPRNQ5BIV9 151 aa14.31□□□□□ -0.12
PDLIM7-215ENST00000506161 TMPRSS11FQ6ZWK6 438 aa14.31□□□□□ -0.12
PDLIM7-215ENST00000506161 OAFQ86UD1 273 aa14.31□□□□□ -0.12
PDLIM7-215ENST00000506161 RASD2Q96D21 266 aa14.31□□□□□ -0.12
PDLIM7-215ENST00000506161 CHODLQ9H9P2 273 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms