RNA–Protein interactions for RNA: ENST00000506042.5

SQSTM1-210, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 921 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-210ENST00000506042 SIAEQ9HAT2 523 aa17.94■□□□□ 0.46
SQSTM1-210ENST00000506042 ELOVL3Q9HB03 270 aa17.94■□□□□ 0.46
SQSTM1-210ENST00000506042 CCL2P13500 99 aa17.93■□□□□ 0.46
SQSTM1-210ENST00000506042 STOMP27105 288 aa17.93■□□□□ 0.46
SQSTM1-210ENST00000506042 RBM34P42696 430 aaKnown RBP17.93■□□□□ 0.46
SQSTM1-210ENST00000506042 IDH3AP50213 366 aa17.93■□□□□ 0.46
SQSTM1-210ENST00000506042 MRPS34P82930 218 aaKnown RBP17.93■□□□□ 0.46
SQSTM1-210ENST00000506042 TSTQ16762 297 aaKnown RBP17.93■□□□□ 0.46
SQSTM1-210ENST00000506042 LRFN4Q6PJG9 635 aa17.93■□□□□ 0.46
SQSTM1-210ENST00000506042 COMTD1Q86VU5 262 aa17.93■□□□□ 0.46
SQSTM1-210ENST00000506042 FUNDC1Q8IVP5 155 aa17.93■□□□□ 0.46
SQSTM1-210ENST00000506042 LRRC18Q8N456 261 aa17.93■□□□□ 0.46
SQSTM1-210ENST00000506042 OR6T1Q8NGN1 323 aa17.93■□□□□ 0.46
SQSTM1-210ENST00000506042 CCL17Q92583 94 aa17.93■□□□□ 0.46
SQSTM1-210ENST00000506042 SH3GL1Q99961 368 aa17.93■□□□□ 0.46
SQSTM1-210ENST00000506042 INIPQ9NRY2 104 aa17.93■□□□□ 0.46
SQSTM1-210ENST00000506042 MRGBPQ9NV56 204 aa17.93■□□□□ 0.46
SQSTM1-210ENST00000506042 SLAMF8Q9P0V8 285 aa17.93■□□□□ 0.46
SQSTM1-210ENST00000506042 TRBV5-3A0A0A0MS03 114 aa17.92■□□□□ 0.46
SQSTM1-210ENST00000506042 HTR3EA5X5Y0 456 aa17.92■□□□□ 0.46
SQSTM1-210ENST00000506042 IFNA14P01570 189 aa17.92■□□□□ 0.46
SQSTM1-210ENST00000506042 ASAH2BP0C7U1 165 aa17.92■□□□□ 0.46
SQSTM1-210ENST00000506042 ACADSP16219 412 aa17.92■□□□□ 0.46
SQSTM1-210ENST00000506042 PCBP3P57721 371 aaKnown RBP17.92■□□□□ 0.46
SQSTM1-210ENST00000506042 TAF11Q15544 211 aa17.92■□□□□ 0.46
SQSTM1-210ENST00000506042 RUNDC3AQ59EK9 446 aa17.92■□□□□ 0.46
SQSTM1-210ENST00000506042 WDR88Q6ZMY6 472 aa17.92■□□□□ 0.46
SQSTM1-210ENST00000506042 CPPED1Q9BRF8 314 aaPredicted RBP17.92■□□□□ 0.46
SQSTM1-210ENST00000506042 BAG5Q9UL15 447 aa17.92■□□□□ 0.46
SQSTM1-210ENST00000506042 PPIAL4EA0A075B759 164 aa17.91■□□□□ 0.46
SQSTM1-210ENST00000506042 PPIAL4CA0A0B4J2A2 164 aa17.91■□□□□ 0.46
SQSTM1-210ENST00000506042 PPIAL4DF5H284 164 aa17.91■□□□□ 0.46
SQSTM1-210ENST00000506042 WNT9BO14905 357 aa17.91■□□□□ 0.46
SQSTM1-210ENST00000506042 TPST2O60704 377 aa17.91■□□□□ 0.46
SQSTM1-210ENST00000506042 IGF2P01344 180 aa17.91■□□□□ 0.46
SQSTM1-210ENST00000506042 MT-ND1P03886 318 aa17.91■□□□□ 0.46
SQSTM1-210ENST00000506042 OPN1SWP03999 348 aa17.91■□□□□ 0.46
SQSTM1-210ENST00000506042 PPIAL4FP0DN26 164 aa17.91■□□□□ 0.46
SQSTM1-210ENST00000506042 TAS2R41P59536 307 aa17.91■□□□□ 0.46
SQSTM1-210ENST00000506042 CD47Q08722 323 aa17.91■□□□□ 0.46
SQSTM1-210ENST00000506042 DUSP7Q16829 419 aa17.91■□□□□ 0.46
SQSTM1-210ENST00000506042 ARMCX4Q5H9R4 360 aa17.91■□□□□ 0.46
SQSTM1-210ENST00000506042 PABPC1L2AQ5JQF8 200 aa17.91■□□□□ 0.46
SQSTM1-210ENST00000506042 C10orf128Q5T292 105 aa17.91■□□□□ 0.46
SQSTM1-210ENST00000506042 SHISA2Q6UWI4 295 aa17.91■□□□□ 0.46
SQSTM1-210ENST00000506042 KLHL36Q8N4N3 616 aa17.91■□□□□ 0.46
SQSTM1-210ENST00000506042 SPICQ8N5J4 248 aa17.91■□□□□ 0.46
SQSTM1-210ENST00000506042 TSPEARQ8WU66 669 aa17.91■□□□□ 0.46
SQSTM1-210ENST00000506042 ZBTB9Q96C00 473 aa17.91■□□□□ 0.46
SQSTM1-210ENST00000506042 TLCD1Q96CP7 247 aa17.91■□□□□ 0.46
SQSTM1-210ENST00000506042 RBP7Q96R05 134 aa17.91■□□□□ 0.46
SQSTM1-210ENST00000506042 TMPRSS13Q9BYE2 586 aa17.91■□□□□ 0.46
SQSTM1-210ENST00000506042 PCDHAC1Q9H158 963 aa17.91■□□□□ 0.46
SQSTM1-210ENST00000506042 C5orf49A4QMS7 147 aa17.9■□□□□ 0.46
SQSTM1-210ENST00000506042 NPIPB13A6NJU9 1138 aa17.9■□□□□ 0.46
SQSTM1-210ENST00000506042 NPIPB4C9JG80 1138 aa17.9■□□□□ 0.46
SQSTM1-210ENST00000506042 SPRY3O43610 288 aa17.9■□□□□ 0.46
SQSTM1-210ENST00000506042 PRSS23O95084 383 aa17.9■□□□□ 0.46
SQSTM1-210ENST00000506042 TNFRSF1AP19438 455 aa17.9■□□□□ 0.46
SQSTM1-210ENST00000506042 GSTM3P21266 225 aa17.9■□□□□ 0.46
SQSTM1-210ENST00000506042 TUBG1P23258 451 aa17.9■□□□□ 0.46
SQSTM1-210ENST00000506042 PCGF2P35227 344 aa17.9■□□□□ 0.46
SQSTM1-210ENST00000506042 GLO1Q04760 184 aa17.9■□□□□ 0.46
SQSTM1-210ENST00000506042 NFYCQ13952 458 aa17.9■□□□□ 0.46
SQSTM1-210ENST00000506042 HIST3H3Q16695 136 aa17.9■□□□□ 0.46
SQSTM1-210ENST00000506042 SYT14Q8NB59 555 aa17.9■□□□□ 0.46
SQSTM1-210ENST00000506042 FGFBP3Q8TAT2 258 aa17.9■□□□□ 0.46
SQSTM1-210ENST00000506042 POP5Q969H6 163 aaKnown RBP17.9■□□□□ 0.46
SQSTM1-210ENST00000506042 SGTBQ96EQ0 304 aa17.9■□□□□ 0.46
SQSTM1-210ENST00000506042 ZNF347Q96SE7 839 aa17.9■□□□□ 0.46
SQSTM1-210ENST00000506042 CGREF1Q99674 301 aa17.9■□□□□ 0.46
SQSTM1-210ENST00000506042 SLC6A7Q99884 636 aa17.9■□□□□ 0.46
SQSTM1-210ENST00000506042 TMBIM4Q9HC24 238 aa17.9■□□□□ 0.46
SQSTM1-210ENST00000506042 TUBG2Q9NRH3 451 aa17.9■□□□□ 0.46
SQSTM1-210ENST00000506042 UBAP1Q9NZ09 502 aa17.9■□□□□ 0.46
SQSTM1-210ENST00000506042 DYSFO75923 2080 aa17.9■□□□□ 0.46
SQSTM1-210ENST00000506042 SURF4O15260 269 aa17.89■□□□□ 0.45
SQSTM1-210ENST00000506042 FUT1P19526 365 aa17.89■□□□□ 0.45
SQSTM1-210ENST00000506042 RPL18Q07020 188 aaKnown RBP17.89■□□□□ 0.45
SQSTM1-210ENST00000506042 SGCAQ16586 387 aa17.89■□□□□ 0.45
SQSTM1-210ENST00000506042 MBNL2Q5VZF2 373 aaKnown RBP17.89■□□□□ 0.45
SQSTM1-210ENST00000506042 FAM205BPQ63HN1 556 aa17.89■□□□□ 0.45
SQSTM1-210ENST00000506042 PAQR4Q8N4S7 273 aaPredicted RBP17.89■□□□□ 0.45
SQSTM1-210ENST00000506042 DPP10Q8N608 796 aa17.89■□□□□ 0.45
SQSTM1-210ENST00000506042 ASB10Q8WXI3 467 aa17.89■□□□□ 0.45
SQSTM1-210ENST00000506042 COG8Q96MW5 612 aa17.89■□□□□ 0.45
SQSTM1-210ENST00000506042 TSPAN32Q96QS1 320 aa17.89■□□□□ 0.45
SQSTM1-210ENST00000506042 WACQ9BTA9 647 aa17.89■□□□□ 0.45
SQSTM1-210ENST00000506042 ZNF426Q9BUY5 554 aa17.89■□□□□ 0.45
SQSTM1-210ENST00000506042 MRI1Q9BV20 369 aa17.89■□□□□ 0.45
SQSTM1-210ENST00000506042 NDEL1Q9GZM8 345 aa17.89■□□□□ 0.45
SQSTM1-210ENST00000506042 IKZF5Q9H5V7 419 aa17.89■□□□□ 0.45
SQSTM1-210ENST00000506042 MED31Q9Y3C7 131 aa17.89■□□□□ 0.45
SQSTM1-210ENST00000506042 DEAF1O75398 565 aaPredicted RBP17.88■□□□□ 0.45
SQSTM1-210ENST00000506042 OR7A10O76100 309 aa17.88■□□□□ 0.45
SQSTM1-210ENST00000506042 F13BP05160 661 aa17.88■□□□□ 0.45
SQSTM1-210ENST00000506042 ADH4P08319 380 aa17.88■□□□□ 0.45
SQSTM1-210ENST00000506042 THRBP10828 461 aa17.88■□□□□ 0.45
SQSTM1-210ENST00000506042 ADRA2CP18825 462 aa17.88■□□□□ 0.45
SQSTM1-210ENST00000506042 ERVS71-1P61550 626 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms