RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 ERCC8Q13216 396 aa2.31□□□□□ -2.04
TOPBP1-204ENST00000505804 CCNJQ5T5M9 372 aa2.31□□□□□ -2.04
TOPBP1-204ENST00000505804 ANKRD22Q5VYY1 191 aa2.31□□□□□ -2.04
TOPBP1-204ENST00000505804 DUX4L9Q6RFH8 374 aaPredicted RBP2.31□□□□□ -2.04
TOPBP1-204ENST00000505804 CCDC73Q6ZRK6 1079 aa2.31□□□□□ -2.04
TOPBP1-204ENST00000505804 OAFQ86UD1 273 aa2.31□□□□□ -2.04
TOPBP1-204ENST00000505804 NECAB1Q8N987 351 aa2.31□□□□□ -2.04
TOPBP1-204ENST00000505804 OR10R2Q8NGX6 335 aa2.31□□□□□ -2.04
TOPBP1-204ENST00000505804 PIBF1Q8WXW3 757 aa2.31□□□□□ -2.04
TOPBP1-204ENST00000505804 FRZBQ92765 325 aa2.31□□□□□ -2.04
TOPBP1-204ENST00000505804 RSPO3Q9BXY4 272 aaPredicted RBP2.31□□□□□ -2.04
TOPBP1-204ENST00000505804 RPP21Q9H633 154 aaKnown RBP2.31□□□□□ -2.04
TOPBP1-204ENST00000505804 PISDQ9UG56 409 aa2.31□□□□□ -2.04
TOPBP1-204ENST00000505804 NUP50Q9UKX7 468 aa2.31□□□□□ -2.04
TOPBP1-204ENST00000505804 ZNF835Q9Y2P0 537 aa2.31□□□□□ -2.04
TOPBP1-204ENST00000505804 CSDC2Q9Y534 153 aaKnown RBP2.31□□□□□ -2.04
TOPBP1-204ENST00000505804 PCM1Q15154 2024 aa2.3□□□□□ -2.04
TOPBP1-204ENST00000505804 ZNF816-ZNF321PA0A0X1KG74 233 aa2.3□□□□□ -2.04
TOPBP1-204ENST00000505804 A0A1W2PQ67 120 aa2.3□□□□□ -2.04
TOPBP1-204ENST00000505804 RAB3DO95716 219 aa2.3□□□□□ -2.04
TOPBP1-204ENST00000505804 BCHEP06276 602 aa2.3□□□□□ -2.04
TOPBP1-204ENST00000505804 MAS1LP35410 378 aa2.3□□□□□ -2.04
TOPBP1-204ENST00000505804 ACTR3P61158 418 aa2.3□□□□□ -2.04
TOPBP1-204ENST00000505804 TWF1Q12792 350 aa2.3□□□□□ -2.04
TOPBP1-204ENST00000505804 TCP10Q12799 353 aa2.3□□□□□ -2.04
TOPBP1-204ENST00000505804 MAB21L1Q13394 359 aa2.3□□□□□ -2.04
TOPBP1-204ENST00000505804 VPS26BQ4G0F5 336 aa2.3□□□□□ -2.04
TOPBP1-204ENST00000505804 ABCA11PQ4W5N1 156 aa2.3□□□□□ -2.04
TOPBP1-204ENST00000505804 C5orf47Q569G3 176 aa2.3□□□□□ -2.04
TOPBP1-204ENST00000505804 ANKRD26P1Q6NSI1 321 aa2.3□□□□□ -2.04
TOPBP1-204ENST00000505804 RNASEKQ6P5S7 137 aaKnown RBP2.3□□□□□ -2.04
TOPBP1-204ENST00000505804 BIVMQ86UB2 503 aa2.3□□□□□ -2.04
TOPBP1-204ENST00000505804 MMAAQ8IVH4 418 aaKnown RBP2.3□□□□□ -2.04
TOPBP1-204ENST00000505804 PDIK1LQ8N165 341 aa2.3□□□□□ -2.04
TOPBP1-204ENST00000505804 LIX1Q8N485 282 aa2.3□□□□□ -2.04
TOPBP1-204ENST00000505804 B3GNT7Q8NFL0 401 aa2.3□□□□□ -2.04
TOPBP1-204ENST00000505804 SYNPRQ8TBG9 265 aa2.3□□□□□ -2.04
TOPBP1-204ENST00000505804 SHC3Q92529 594 aa2.3□□□□□ -2.04
TOPBP1-204ENST00000505804 CREB3L1Q96BA8 519 aa2.3□□□□□ -2.04
TOPBP1-204ENST00000505804 PDXPQ96GD0 296 aa2.3□□□□□ -2.04
TOPBP1-204ENST00000505804 ATP5SQ99766 215 aa2.3□□□□□ -2.04
TOPBP1-204ENST00000505804 C12orf10Q9HB07 376 aa2.3□□□□□ -2.04
TOPBP1-204ENST00000505804 ISYNA1Q9NPH2 558 aa2.3□□□□□ -2.04
TOPBP1-204ENST00000505804 KCNJ16Q9NPI9 418 aa2.3□□□□□ -2.04
TOPBP1-204ENST00000505804 ETNK2Q9NVF9 386 aa2.3□□□□□ -2.04
TOPBP1-204ENST00000505804 SLC2A8Q9NY64 477 aa2.3□□□□□ -2.04
TOPBP1-204ENST00000505804 OPN4Q9UHM6 478 aa2.3□□□□□ -2.04
TOPBP1-204ENST00000505804 LSM7Q9UK45 103 aaKnown RBP2.3□□□□□ -2.04
TOPBP1-204ENST00000505804 ING4Q9UNL4 249 aa2.3□□□□□ -2.04
TOPBP1-204ENST00000505804 CAMTA1Q9Y6Y1 1673 aa2.3□□□□□ -2.04
TOPBP1-204ENST00000505804 NUP214P35658 2090 aaPredicted RBP2.3□□□□□ -2.04
TOPBP1-204ENST00000505804 OBSCNQ5VST9 7968 aa2.29□□□□□ -2.04
TOPBP1-204ENST00000505804 CABIN1Q9Y6J0 2220 aa2.29□□□□□ -2.04
TOPBP1-204ENST00000505804 IGHV3-74A0A0B4J1X5 117 aa2.29□□□□□ -2.04
TOPBP1-204ENST00000505804 IGHV5-10-1A0A0J9YXX1 117 aa2.29□□□□□ -2.04
TOPBP1-204ENST00000505804 SPRR5A0A1B0GTR4 108 aa2.29□□□□□ -2.04
TOPBP1-204ENST00000505804 MPHOSPH10O00566 681 aaKnown RBP2.29□□□□□ -2.04
TOPBP1-204ENST00000505804 MRPS12O15235 138 aaKnown RBP2.29□□□□□ -2.04
TOPBP1-204ENST00000505804 NDUFB10O96000 172 aa2.29□□□□□ -2.04
TOPBP1-204ENST00000505804 ZNF250P15622 560 aa2.29□□□□□ -2.04
TOPBP1-204ENST00000505804 TNNI1P19237 187 aa2.29□□□□□ -2.04
TOPBP1-204ENST00000505804 NAMPTP43490 491 aa2.29□□□□□ -2.04
TOPBP1-204ENST00000505804 CCNHP51946 323 aaPredicted RBP2.29□□□□□ -2.04
TOPBP1-204ENST00000505804 ESRRGP62508 458 aa2.29□□□□□ -2.04
TOPBP1-204ENST00000505804 RGNQ15493 299 aa2.29□□□□□ -2.04
TOPBP1-204ENST00000505804 SSX2Q16385 188 aa2.29□□□□□ -2.04
TOPBP1-204ENST00000505804 PTPN20Q4JDL3 420 aa2.29□□□□□ -2.04
TOPBP1-204ENST00000505804 NANOGNBQ7Z5D8 188 aa2.29□□□□□ -2.04
TOPBP1-204ENST00000505804 SPATA4Q8NEY3 305 aa2.29□□□□□ -2.04
TOPBP1-204ENST00000505804 GPR151Q8TDV0 419 aa2.29□□□□□ -2.04
TOPBP1-204ENST00000505804 RBMXL1Q96E39 390 aaKnown RBP2.29□□□□□ -2.04
TOPBP1-204ENST00000505804 PKNOX2Q96KN3 472 aa2.29□□□□□ -2.04
TOPBP1-204ENST00000505804 SERPINB12Q96P63 405 aa2.29□□□□□ -2.04
TOPBP1-204ENST00000505804 SCRT1Q9BWW7 348 aa2.29□□□□□ -2.04
TOPBP1-204ENST00000505804 SLC25A2Q9BXI2 301 aa2.29□□□□□ -2.04
TOPBP1-204ENST00000505804 FGF20Q9NP95 211 aaPredicted RBP2.29□□□□□ -2.04
TOPBP1-204ENST00000505804 ZNF355PQ9NSJ1 428 aa2.29□□□□□ -2.04
TOPBP1-204ENST00000505804 PSMC3IPQ9P2W1 217 aaPredicted RBP2.29□□□□□ -2.04
TOPBP1-204ENST00000505804 ST3GAL6Q9Y274 331 aa2.29□□□□□ -2.04
TOPBP1-204ENST00000505804 STARD10Q9Y365 291 aa2.29□□□□□ -2.04
TOPBP1-204ENST00000505804 BET1O15155 118 aa2.28□□□□□ -2.04
TOPBP1-204ENST00000505804 DPM1O60762 260 aa2.28□□□□□ -2.04
TOPBP1-204ENST00000505804 EEDO75530 441 aaKnown RBP2.28□□□□□ -2.04
TOPBP1-204ENST00000505804 SRP72O76094 671 aaKnown RBP2.28□□□□□ -2.04
TOPBP1-204ENST00000505804 SLC25A14O95258 325 aaPredicted RBP2.28□□□□□ -2.04
TOPBP1-204ENST00000505804 HLA-DPB1P04440 258 aa2.28□□□□□ -2.04
TOPBP1-204ENST00000505804 ADRA2AP08913 450 aa2.28□□□□□ -2.04
TOPBP1-204ENST00000505804 CISD3P0C7P0 127 aa2.28□□□□□ -2.04
TOPBP1-204ENST00000505804 ZNF286BP0CG31 522 aa2.28□□□□□ -2.04
TOPBP1-204ENST00000505804 MUC1P15941 1255 aaPredicted RBP2.28□□□□□ -2.04
TOPBP1-204ENST00000505804 ZNF43P17038 809 aa2.28□□□□□ -2.04
TOPBP1-204ENST00000505804 PSMC3P17980 439 aa2.28□□□□□ -2.04
TOPBP1-204ENST00000505804 SSR4P51571 173 aa2.28□□□□□ -2.04
TOPBP1-204ENST00000505804 ZNF138P52744 262 aa2.28□□□□□ -2.04
TOPBP1-204ENST00000505804 SYCNQ0VAF6 134 aa2.28□□□□□ -2.04
TOPBP1-204ENST00000505804 CEMP1Q6PRD7 247 aaPredicted RBP2.28□□□□□ -2.04
TOPBP1-204ENST00000505804 ARL9Q6T311 187 aa2.28□□□□□ -2.04
TOPBP1-204ENST00000505804 TMEM107Q6UX40 140 aa2.28□□□□□ -2.04
TOPBP1-204ENST00000505804 KRTAP5-5Q701N2 237 aaPredicted RBP2.28□□□□□ -2.04
TOPBP1-204ENST00000505804 CDR2LQ86X02 465 aaPredicted RBP2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms