RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 HSP90AA5PQ58FG0 334 aa1.39□□□□□ -2.19
HMGB1P29-201ENST00000505659 ARL9Q6T311 187 aa1.39□□□□□ -2.19
HMGB1P29-201ENST00000505659 UNQ9165/PRO28630Q6UXU0 137 aa1.39□□□□□ -2.19
HMGB1P29-201ENST00000505659 HDDC2Q7Z4H3 204 aa1.39□□□□□ -2.19
HMGB1P29-201ENST00000505659 OAFQ86UD1 273 aa1.39□□□□□ -2.19
HMGB1P29-201ENST00000505659 CALHM1Q8IU99 346 aa1.39□□□□□ -2.19
HMGB1P29-201ENST00000505659 OR2T3Q8NH03 318 aa1.39□□□□□ -2.19
HMGB1P29-201ENST00000505659 FLYWCH2Q96CP2 140 aaKnown RBP1.39□□□□□ -2.19
HMGB1P29-201ENST00000505659 C10orf35Q96D05 121 aa1.39□□□□□ -2.19
HMGB1P29-201ENST00000505659 CAMK2N2Q96S95 79 aa1.39□□□□□ -2.19
HMGB1P29-201ENST00000505659 P2RX4Q99571 388 aa1.39□□□□□ -2.19
HMGB1P29-201ENST00000505659 SH3GL3Q99963 347 aa1.39□□□□□ -2.19
HMGB1P29-201ENST00000505659 TRIM62Q9BVG3 475 aa1.39□□□□□ -2.19
HMGB1P29-201ENST00000505659 UVRAGQ9P2Y5 699 aa1.39□□□□□ -2.19
HMGB1P29-201ENST00000505659 SHPKQ9UHJ6 478 aa1.39□□□□□ -2.19
HMGB1P29-201ENST00000505659 ZNF230Q9UIE0 474 aaPredicted RBP1.39□□□□□ -2.19
HMGB1P29-201ENST00000505659 TSSC4Q9Y5U2 329 aaPredicted RBP1.39□□□□□ -2.19
HMGB1P29-201ENST00000505659 IKBKGQ9Y6K9 419 aa1.39□□□□□ -2.19
HMGB1P29-201ENST00000505659 SEC16AO15027 2179 aa1.39□□□□□ -2.19
HMGB1P29-201ENST00000505659 OTOGLQ3ZCN5 2332 aa1.39□□□□□ -2.19
HMGB1P29-201ENST00000505659 KIF16BQ96L93 1317 aa1.39□□□□□ -2.19
HMGB1P29-201ENST00000505659 ANKRD12Q6UB98 2062 aa1.38□□□□□ -2.19
HMGB1P29-201ENST00000505659 C17orf51A8MQB3 221 aa1.38□□□□□ -2.19
HMGB1P29-201ENST00000505659 F6UB75 175 aa1.38□□□□□ -2.19
HMGB1P29-201ENST00000505659 CHST1O43916 411 aa1.38□□□□□ -2.19
HMGB1P29-201ENST00000505659 EIF3GO75821 320 aaKnown RBP eCLIP1.38□□□□□ -2.19
HMGB1P29-201ENST00000505659 SCGNO76038 276 aa1.38□□□□□ -2.19
HMGB1P29-201ENST00000505659 YIF1AO95070 293 aa1.38□□□□□ -2.19
HMGB1P29-201ENST00000505659 IGHDP01880 384 aa1.38□□□□□ -2.19
HMGB1P29-201ENST00000505659 HSPA5P11021 654 aaKnown RBP1.38□□□□□ -2.19
HMGB1P29-201ENST00000505659 AQP2P41181 271 aa1.38□□□□□ -2.19
HMGB1P29-201ENST00000505659 ACAA2P42765 397 aaKnown RBP1.38□□□□□ -2.19
HMGB1P29-201ENST00000505659 YAP1P46937 504 aaKnown RBP1.38□□□□□ -2.19
HMGB1P29-201ENST00000505659 CCT3P49368 545 aaKnown RBP1.38□□□□□ -2.19
HMGB1P29-201ENST00000505659 PRRX1P54821 245 aa1.38□□□□□ -2.19
HMGB1P29-201ENST00000505659 BPIFB3P59826 476 aa1.38□□□□□ -2.19
HMGB1P29-201ENST00000505659 POLR2FP61218 127 aaKnown RBP1.38□□□□□ -2.19
HMGB1P29-201ENST00000505659 KCTD21Q4G0X4 260 aa1.38□□□□□ -2.19
HMGB1P29-201ENST00000505659 TEX43Q6ZNM6 134 aa1.38□□□□□ -2.19
HMGB1P29-201ENST00000505659 OR1P1Q8NH06 330 aa1.38□□□□□ -2.19
HMGB1P29-201ENST00000505659 LKAAEAR1Q8TD35 194 aa1.38□□□□□ -2.19
HMGB1P29-201ENST00000505659 SCFD1Q8WVM8 642 aa1.38□□□□□ -2.19
HMGB1P29-201ENST00000505659 PSKH2Q96QS6 385 aa1.38□□□□□ -2.19
HMGB1P29-201ENST00000505659 FMO2Q99518 471 aa1.38□□□□□ -2.19
HMGB1P29-201ENST00000505659 COPS8Q99627 209 aa1.38□□□□□ -2.19
HMGB1P29-201ENST00000505659 KCTD14Q9BQ13 255 aaPredicted RBP1.38□□□□□ -2.19
HMGB1P29-201ENST00000505659 LHX5Q9H2C1 402 aa1.38□□□□□ -2.19
HMGB1P29-201ENST00000505659 NMRAL1Q9HBL8 299 aa1.38□□□□□ -2.19
HMGB1P29-201ENST00000505659 DHCR7Q9UBM7 475 aaKnown RBP1.38□□□□□ -2.19
HMGB1P29-201ENST00000505659 CTSFQ9UBX1 484 aa1.38□□□□□ -2.19
HMGB1P29-201ENST00000505659 CTNNA3Q9UI47 895 aa1.38□□□□□ -2.19
HMGB1P29-201ENST00000505659 ADAM28Q9UKQ2 775 aa1.38□□□□□ -2.19
HMGB1P29-201ENST00000505659 ATP10AO60312 1499 aa1.37□□□□□ -2.19
HMGB1P29-201ENST00000505659 ZNF716A6NP11 495 aa1.37□□□□□ -2.19
HMGB1P29-201ENST00000505659 UBXN8O00124 270 aa1.37□□□□□ -2.19
HMGB1P29-201ENST00000505659 MRPS12O15235 138 aaKnown RBP1.37□□□□□ -2.19
HMGB1P29-201ENST00000505659 CLDN9O95484 217 aa1.37□□□□□ -2.19
HMGB1P29-201ENST00000505659 RAB3DO95716 219 aa1.37□□□□□ -2.19
HMGB1P29-201ENST00000505659 AIFM1O95831 613 aa1.37□□□□□ -2.19
HMGB1P29-201ENST00000505659 HLA-DQA1P01909 254 aa1.37□□□□□ -2.19
HMGB1P29-201ENST00000505659 CALM1P0DP23 149 aa1.37□□□□□ -2.19
HMGB1P29-201ENST00000505659 CALM2P0DP24 149 aa1.37□□□□□ -2.19
HMGB1P29-201ENST00000505659 CALM3P0DP25 149 aa1.37□□□□□ -2.19
HMGB1P29-201ENST00000505659 TGFBR1P36897 503 aa1.37□□□□□ -2.19
HMGB1P29-201ENST00000505659 GRIA1P42261 906 aa1.37□□□□□ -2.19
HMGB1P29-201ENST00000505659 MAGEA8P43361 318 aa1.37□□□□□ -2.19
HMGB1P29-201ENST00000505659 UGT2B15P54855 530 aa1.37□□□□□ -2.19
HMGB1P29-201ENST00000505659 IFT88Q13099 833 aa1.37□□□□□ -2.19
HMGB1P29-201ENST00000505659 BAMBIQ13145 260 aa1.37□□□□□ -2.19
HMGB1P29-201ENST00000505659 PTPN20Q4JDL3 420 aa1.37□□□□□ -2.19
HMGB1P29-201ENST00000505659 FBXW12Q6X9E4 464 aa1.37□□□□□ -2.19
HMGB1P29-201ENST00000505659 ASCL5Q7RTU5 278 aa1.37□□□□□ -2.19
HMGB1P29-201ENST00000505659 THRSPQ92748 146 aa1.37□□□□□ -2.19
HMGB1P29-201ENST00000505659 COQ2Q96H96 371 aa1.37□□□□□ -2.19
HMGB1P29-201ENST00000505659 ZNF488Q96MN9 340 aa1.37□□□□□ -2.19
HMGB1P29-201ENST00000505659 NIPAL2Q9H841 368 aa1.37□□□□□ -2.19
HMGB1P29-201ENST00000505659 RMND5AQ9H871 391 aa1.37□□□□□ -2.19
HMGB1P29-201ENST00000505659 ITGB4P16144 1822 aa1.37□□□□□ -2.19
HMGB1P29-201ENST00000505659 IGKV2-24A0A0C4DH68 120 aa1.36□□□□□ -2.19
HMGB1P29-201ENST00000505659 A0A1W2PNN7 141 aa1.36□□□□□ -2.19
HMGB1P29-201ENST00000505659 BPY2O14599 106 aa1.36□□□□□ -2.19
HMGB1P29-201ENST00000505659 PSMA5P28066 241 aa1.36□□□□□ -2.19
HMGB1P29-201ENST00000505659 CD1CP29017 333 aa1.36□□□□□ -2.19
HMGB1P29-201ENST00000505659 MRPL28Q13084 256 aaKnown RBP1.36□□□□□ -2.19
HMGB1P29-201ENST00000505659 PPIL2Q13356 520 aa1.36□□□□□ -2.19
HMGB1P29-201ENST00000505659 ARHGAP19Q14CB8 494 aa1.36□□□□□ -2.19
HMGB1P29-201ENST00000505659 PEX26Q7Z412 305 aa1.36□□□□□ -2.19
HMGB1P29-201ENST00000505659 WDFY1Q8IWB7 410 aa1.36□□□□□ -2.19
HMGB1P29-201ENST00000505659 PRSS58Q8IYP2 241 aa1.36□□□□□ -2.19
HMGB1P29-201ENST00000505659 C17orf50Q8WW18 174 aa1.36□□□□□ -2.19
HMGB1P29-201ENST00000505659 PLEKHA8Q96JA3 519 aa1.36□□□□□ -2.19
HMGB1P29-201ENST00000505659 RPRD1AQ96P16 312 aaPredicted RBP1.36□□□□□ -2.19
HMGB1P29-201ENST00000505659 CNN2Q99439 309 aaKnown RBP1.36□□□□□ -2.19
HMGB1P29-201ENST00000505659 NPY6RQ99463 290 aa1.36□□□□□ -2.19
HMGB1P29-201ENST00000505659 MFFQ9GZY8 342 aa1.36□□□□□ -2.19
HMGB1P29-201ENST00000505659 PARP12Q9H0J9 701 aaKnown RBP1.36□□□□□ -2.19
HMGB1P29-201ENST00000505659 RIBC2Q9H4K1 309 aa1.36□□□□□ -2.19
HMGB1P29-201ENST00000505659 DHX35Q9H5Z1 703 aaKnown RBP1.36□□□□□ -2.19
HMGB1P29-201ENST00000505659 DDX19AQ9NUU7 478 aaKnown RBP1.36□□□□□ -2.19
HMGB1P29-201ENST00000505659 MMACHCQ9Y4U1 282 aa1.36□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms