RNA–Protein interactions for RNA: ENST00000505066.5

DDR1-256, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 4

Gene DDR1, Length 556 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-256	ENST00000505066	GAA	P10253	952 aa		14.03	□□□□□ -0.16
DDR1-256	ENST00000505066	ZNF250	P15622	560 aa		14.03	□□□□□ -0.16
DDR1-256	ENST00000505066	STOM	P27105	288 aa		14.03	□□□□□ -0.16
DDR1-256	ENST00000505066	ZNF81	P51508	661 aa		14.03	□□□□□ -0.16
DDR1-256	ENST00000505066	ACTG1	P63261	375 aa		14.03	□□□□□ -0.16
DDR1-256	ENST00000505066	ST3GAL3	Q11203	375 aa		14.03	□□□□□ -0.16
DDR1-256	ENST00000505066	FAM205BP	Q63HN1	556 aa		14.03	□□□□□ -0.16
DDR1-256	ENST00000505066	NANOGP8	Q6NSW7	305 aa		14.03	□□□□□ -0.16
DDR1-256	ENST00000505066	NHLRC1	Q6VVB1	395 aa		14.03	□□□□□ -0.16
DDR1-256	ENST00000505066	WDR88	Q6ZMY6	472 aa		14.03	□□□□□ -0.16
DDR1-256	ENST00000505066	RRM2B	Q7LG56	351 aa		14.03	□□□□□ -0.16
DDR1-256	ENST00000505066	RETREG3	Q86VR2	466 aa		14.03	□□□□□ -0.16
DDR1-256	ENST00000505066	OR4M2	Q8NGB6	313 aa		14.03	□□□□□ -0.16
DDR1-256	ENST00000505066	ZFAND2B	Q8WV99	257 aa		14.03	□□□□□ -0.16
DDR1-256	ENST00000505066	ZNF75A	Q96N20	296 aa		14.03	□□□□□ -0.16
DDR1-256	ENST00000505066	ZNF347	Q96SE7	839 aa		14.03	□□□□□ -0.16
DDR1-256	ENST00000505066	WFDC6	Q9BQY6	131 aa		14.03	□□□□□ -0.16
DDR1-256	ENST00000505066	ELOVL3	Q9HB03	270 aa		14.03	□□□□□ -0.16
DDR1-256	ENST00000505066	ZNF224	Q9NZL3	707 aa		14.03	□□□□□ -0.16
DDR1-256	ENST00000505066	CGGBP1	Q9UFW8	167 aa	Predicted RBP	14.03	□□□□□ -0.16
DDR1-256	ENST00000505066	AP3M1	Q9Y2T2	418 aa		14.03	□□□□□ -0.16
DDR1-256	ENST00000505066	PNP	P00491	289 aa		14.02	□□□□□ -0.17
DDR1-256	ENST00000505066	CCL2	P13500	99 aa		14.02	□□□□□ -0.17
DDR1-256	ENST00000505066	ITGA2	P17301	1181 aa		14.02	□□□□□ -0.17
DDR1-256	ENST00000505066	AQP2	P41181	271 aa		14.02	□□□□□ -0.17
DDR1-256	ENST00000505066	MRPS34	P82930	218 aa	Known RBP	14.02	□□□□□ -0.17
DDR1-256	ENST00000505066	MVK	Q03426	396 aa		14.02	□□□□□ -0.17
DDR1-256	ENST00000505066	SELPLG	Q14242	412 aa		14.02	□□□□□ -0.17
DDR1-256	ENST00000505066	LRRC23	Q53EV4	343 aa	Predicted RBP	14.02	□□□□□ -0.17
DDR1-256	ENST00000505066	ALG10	Q5BKT4	473 aa		14.02	□□□□□ -0.17
DDR1-256	ENST00000505066	TTMP	Q5BVD1	217 aa		14.02	□□□□□ -0.17
DDR1-256	ENST00000505066	COQ5	Q5HYK3	327 aa		14.02	□□□□□ -0.17
DDR1-256	ENST00000505066	PABPC1L2A	Q5JQF8	200 aa		14.02	□□□□□ -0.17
DDR1-256	ENST00000505066	ASB10	Q8WXI3	467 aa		14.02	□□□□□ -0.17
DDR1-256	ENST00000505066	NSMAF	Q92636	917 aa		14.02	□□□□□ -0.17
DDR1-256	ENST00000505066	LRRC58	Q96CX6	371 aa		14.02	□□□□□ -0.17
DDR1-256	ENST00000505066	TPD52L3	Q96J77	140 aa		14.02	□□□□□ -0.17
DDR1-256	ENST00000505066	ISPD	A4D126	451 aa		14.01	□□□□□ -0.17
DDR1-256	ENST00000505066	C5orf49	A4QMS7	147 aa		14.01	□□□□□ -0.17
DDR1-256	ENST00000505066		A6NIZ1	184 aa		14.01	□□□□□ -0.17
DDR1-256	ENST00000505066	TRIM77	I1YAP6	450 aa		14.01	□□□□□ -0.17
DDR1-256	ENST00000505066	MRAS	O14807	208 aa		14.01	□□□□□ -0.17
DDR1-256	ENST00000505066	EDF1	O60869	148 aa	Known RBP	14.01	□□□□□ -0.17
DDR1-256	ENST00000505066	TRMU	O75648	421 aa	Known RBP	14.01	□□□□□ -0.17
DDR1-256	ENST00000505066	TNFSF4	P23510	183 aa		14.01	□□□□□ -0.17
DDR1-256	ENST00000505066	CRYBB2	P43320	205 aa		14.01	□□□□□ -0.17
DDR1-256	ENST00000505066	MAGEB1	P43366	347 aa		14.01	□□□□□ -0.17
DDR1-256	ENST00000505066	UGT2B15	P54855	530 aa		14.01	□□□□□ -0.17
DDR1-256	ENST00000505066	RAP1B	P61224	184 aa		14.01	□□□□□ -0.17
DDR1-256	ENST00000505066	RAP1A	P62834	184 aa		14.01	□□□□□ -0.17
DDR1-256	ENST00000505066	SRSF2	Q01130	221 aa	Known RBP	14.01	□□□□□ -0.17
DDR1-256	ENST00000505066	TOP3A	Q13472	1001 aa	Predicted RBP	14.01	□□□□□ -0.17
DDR1-256	ENST00000505066	TST	Q16762	297 aa	Known RBP	14.01	□□□□□ -0.17
DDR1-256	ENST00000505066	THEM4	Q5T1C6	240 aa		14.01	□□□□□ -0.17
DDR1-256	ENST00000505066	USP51	Q70EK9	711 aa		14.01	□□□□□ -0.17
DDR1-256	ENST00000505066	ZNF584	Q8IVC4	421 aa		14.01	□□□□□ -0.17
DDR1-256	ENST00000505066	ST7L	Q8TDW4	575 aa		14.01	□□□□□ -0.17
DDR1-256	ENST00000505066	TMEM255B	Q8WV15	326 aa		14.01	□□□□□ -0.17
DDR1-256	ENST00000505066	DIRC2	Q96SL1	478 aa		14.01	□□□□□ -0.17
DDR1-256	ENST00000505066	GAL3ST1	Q99999	423 aa		14.01	□□□□□ -0.17
DDR1-256	ENST00000505066	ZNF426	Q9BUY5	554 aa		14.01	□□□□□ -0.17
DDR1-256	ENST00000505066	ALG12	Q9BV10	488 aa		14.01	□□□□□ -0.17
DDR1-256	ENST00000505066	FNDC11	Q9BVV2	318 aa		14.01	□□□□□ -0.17
DDR1-256	ENST00000505066	RSPO3	Q9BXY4	272 aa	Predicted RBP	14.01	□□□□□ -0.17
DDR1-256	ENST00000505066	TXNIP	Q9H3M7	391 aa		14.01	□□□□□ -0.17
DDR1-256	ENST00000505066	ZNF665	Q9H7R5	613 aa		14.01	□□□□□ -0.17
DDR1-256	ENST00000505066	VIPAS39	Q9H9C1	493 aa		14.01	□□□□□ -0.17
DDR1-256	ENST00000505066	MYEF2	Q9P2K5	600 aa	Known RBP	14.01	□□□□□ -0.17
DDR1-256	ENST00000505066	TIMM10B	Q9Y5J6	103 aa		14.01	□□□□□ -0.17
DDR1-256	ENST00000505066	IGLV3-9	A0A075B6K5	115 aa		14	□□□□□ -0.17
DDR1-256	ENST00000505066	NPIPB13	A6NJU9	1138 aa		14	□□□□□ -0.17
DDR1-256	ENST00000505066	C12orf71	A8MTZ7	269 aa		14	□□□□□ -0.17
DDR1-256	ENST00000505066	NPIPB4	C9JG80	1138 aa		14	□□□□□ -0.17
DDR1-256	ENST00000505066	GSTA4	O15217	222 aa		14	□□□□□ -0.17
DDR1-256	ENST00000505066	MPZL1	O95297	269 aa		14	□□□□□ -0.17
DDR1-256	ENST00000505066	CLPTM1	O96005	669 aa		14	□□□□□ -0.17
DDR1-256	ENST00000505066	GSTM3	P21266	225 aa		14	□□□□□ -0.17
DDR1-256	ENST00000505066	GATA3	P23771	443 aa		14	□□□□□ -0.17
DDR1-256	ENST00000505066	ARFIP2	P53365	341 aa		14	□□□□□ -0.17
DDR1-256	ENST00000505066	GLO1	Q04760	184 aa		14	□□□□□ -0.17
DDR1-256	ENST00000505066	PIN1	Q13526	163 aa	Predicted RBP	14	□□□□□ -0.17
DDR1-256	ENST00000505066	HIST3H3	Q16695	136 aa		14	□□□□□ -0.17
DDR1-256	ENST00000505066	ANKDD1A	Q495B1	522 aa		14	□□□□□ -0.17
DDR1-256	ENST00000505066	C10orf128	Q5T292	105 aa		14	□□□□□ -0.17
DDR1-256	ENST00000505066	RBMS3	Q6XE24	437 aa	Known RBP	14	□□□□□ -0.17
DDR1-256	ENST00000505066	PFN4	Q8NHR9	129 aa		14	□□□□□ -0.17
DDR1-256	ENST00000505066	FGFBP3	Q8TAT2	258 aa		14	□□□□□ -0.17
DDR1-256	ENST00000505066	CCL17	Q92583	94 aa		14	□□□□□ -0.17
DDR1-256	ENST00000505066	SUCNR1	Q9BXA5	334 aa		14	□□□□□ -0.17
DDR1-256	ENST00000505066	TMEM120A	Q9BXJ8	343 aa		14	□□□□□ -0.17
DDR1-256	ENST00000505066	MEPE	Q9NQ76	525 aa	Predicted RBP	14	□□□□□ -0.17
DDR1-256	ENST00000505066	PCDHB10	Q9UN67	800 aa		14	□□□□□ -0.17
DDR1-256	ENST00000505066	ARFGEF3	Q5TH69	2177 aa		14	□□□□□ -0.17
DDR1-256	ENST00000505066		A0A1W2PPL8	197 aa		13.99	□□□□□ -0.17
DDR1-256	ENST00000505066		J3QLI3	93 aa		13.99	□□□□□ -0.17
DDR1-256	ENST00000505066	XKRY	O14609	159 aa		13.99	□□□□□ -0.17
DDR1-256	ENST00000505066	SPRY3	O43610	288 aa		13.99	□□□□□ -0.17
DDR1-256	ENST00000505066	IGHV3-13	P01766	116 aa		13.99	□□□□□ -0.17
DDR1-256	ENST00000505066	IGFBP1	P08833	259 aa	Predicted RBP	13.99	□□□□□ -0.17
DDR1-256	ENST00000505066	IFI30	P13284	250 aa		13.99	□□□□□ -0.17

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