RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 SEM1Q6ZVN7 128 aa9.19□□□□□ -0.94
TPM3-217ENST00000504663 SLC16A9Q7RTY1 509 aa9.19□□□□□ -0.94
TPM3-217ENST00000504663 OR6K6Q8NGW6 343 aa9.19□□□□□ -0.94
TPM3-217ENST00000504663 RPS4Y2Q8TD47 263 aa9.19□□□□□ -0.94
TPM3-217ENST00000504663 SPRYD4Q8WW59 207 aaPredicted RBP9.19□□□□□ -0.94
TPM3-217ENST00000504663 RORBQ92753 470 aa9.19□□□□□ -0.94
TPM3-217ENST00000504663 ZNF775Q96BV0 537 aaPredicted RBP9.19□□□□□ -0.94
TPM3-217ENST00000504663 ZNF837Q96EG3 531 aaPredicted RBP9.19□□□□□ -0.94
TPM3-217ENST00000504663 TBX5Q99593 518 aa9.19□□□□□ -0.94
TPM3-217ENST00000504663 SLX1AQ9BQ83 275 aa9.19□□□□□ -0.94
TPM3-217ENST00000504663 ALG8Q9BVK2 526 aa9.19□□□□□ -0.94
TPM3-217ENST00000504663 MND1Q9BWT6 205 aa9.19□□□□□ -0.94
TPM3-217ENST00000504663 LDAHQ9H6V9 325 aa9.19□□□□□ -0.94
TPM3-217ENST00000504663 INPP5EQ9NRR6 644 aa9.19□□□□□ -0.94
TPM3-217ENST00000504663 PAQR5Q9NXK6 330 aaPredicted RBP9.19□□□□□ -0.94
TPM3-217ENST00000504663 GLTPQ9NZD2 209 aa9.19□□□□□ -0.94
TPM3-217ENST00000504663 CAMK2AQ9UQM7 478 aa9.19□□□□□ -0.94
TPM3-217ENST00000504663 SIRT4Q9Y6E7 314 aaPredicted RBP9.19□□□□□ -0.94
TPM3-217ENST00000504663 USP24Q9UPU5 2620 aa9.18□□□□□ -0.94
TPM3-217ENST00000504663 E9PI62 339 aa9.18□□□□□ -0.94
TPM3-217ENST00000504663 MAGEB4O15481 346 aaPredicted RBP9.18□□□□□ -0.94
TPM3-217ENST00000504663 SS18L1O75177 396 aaPredicted RBP9.18□□□□□ -0.94
TPM3-217ENST00000504663 KHDRBS3O75525 346 aaKnown RBP9.18□□□□□ -0.94
TPM3-217ENST00000504663 GABARAPO95166 117 aa9.18□□□□□ -0.94
TPM3-217ENST00000504663 HRGP04196 525 aa9.18□□□□□ -0.94
TPM3-217ENST00000504663 OR2T7P0C7T2 308 aa9.18□□□□□ -0.94
TPM3-217ENST00000504663 ALOX5APP20292 161 aa9.18□□□□□ -0.94
TPM3-217ENST00000504663 PSMB9P28065 219 aa9.18□□□□□ -0.94
TPM3-217ENST00000504663 CSNK1A1P48729 337 aa9.18□□□□□ -0.94
TPM3-217ENST00000504663 WNT4P56705 351 aa9.18□□□□□ -0.94
TPM3-217ENST00000504663 CLRN1P58418 232 aa9.18□□□□□ -0.94
TPM3-217ENST00000504663 ACTC1P68032 377 aa9.18□□□□□ -0.94
TPM3-217ENST00000504663 ACTA1P68133 377 aa9.18□□□□□ -0.94
TPM3-217ENST00000504663 MLLT11Q13015 90 aaPredicted RBP9.18□□□□□ -0.94
TPM3-217ENST00000504663 AQP6Q13520 282 aa9.18□□□□□ -0.94
TPM3-217ENST00000504663 SPHARQ15513 63 aa9.18□□□□□ -0.94
TPM3-217ENST00000504663 KCNMB1Q16558 191 aa9.18□□□□□ -0.94
TPM3-217ENST00000504663 TIGD6Q17RP2 521 aa9.18□□□□□ -0.94
TPM3-217ENST00000504663 ACSF3Q4G176 576 aaPredicted RBP9.18□□□□□ -0.94
TPM3-217ENST00000504663 TEX30Q5JUR7 227 aa9.18□□□□□ -0.94
TPM3-217ENST00000504663 THEM4Q5T1C6 240 aa9.18□□□□□ -0.94
TPM3-217ENST00000504663 RTL6Q6ICC9 239 aa9.18□□□□□ -0.94
TPM3-217ENST00000504663 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.18□□□□□ -0.94
TPM3-217ENST00000504663 HDDC2Q7Z4H3 204 aa9.18□□□□□ -0.94
TPM3-217ENST00000504663 GPR141Q7Z602 305 aa9.18□□□□□ -0.94
TPM3-217ENST00000504663 ERI1Q8IV48 349 aaKnown RBP9.18□□□□□ -0.94
TPM3-217ENST00000504663 TUSC5Q8IXB3 177 aa9.18□□□□□ -0.94
TPM3-217ENST00000504663 OR10H4Q8NGA5 316 aa9.18□□□□□ -0.94
TPM3-217ENST00000504663 OR2T27Q8NH04 317 aa9.18□□□□□ -0.94
TPM3-217ENST00000504663 ST7LQ8TDW4 575 aa9.18□□□□□ -0.94
TPM3-217ENST00000504663 C11orf40Q8WZ69 217 aa9.18□□□□□ -0.94
TPM3-217ENST00000504663 HTRA1Q92743 480 aa9.18□□□□□ -0.94
TPM3-217ENST00000504663 TRMT61AQ96FX7 289 aaKnown RBP9.18□□□□□ -0.94
TPM3-217ENST00000504663 INTS14Q96SY0 518 aa9.18□□□□□ -0.94
TPM3-217ENST00000504663 MGLLQ99685 303 aa9.18□□□□□ -0.94
TPM3-217ENST00000504663 TTTY10Q9BZA0 68 aa9.18□□□□□ -0.94
TPM3-217ENST00000504663 YIPF3Q9GZM5 350 aa9.18□□□□□ -0.94
TPM3-217ENST00000504663 ISYNA1Q9NPH2 558 aa9.18□□□□□ -0.94
TPM3-217ENST00000504663 TIGARQ9NQ88 270 aa9.18□□□□□ -0.94
TPM3-217ENST00000504663 MRM2Q9UI43 246 aaKnown RBP9.18□□□□□ -0.94
TPM3-217ENST00000504663 KCNG2Q9UJ96 466 aa9.18□□□□□ -0.94
TPM3-217ENST00000504663 ENPP5Q9UJA9 477 aa9.18□□□□□ -0.94
TPM3-217ENST00000504663 CLEC4AQ9UMR7 237 aa9.18□□□□□ -0.94
TPM3-217ENST00000504663 CAB39Q9Y376 341 aaPredicted RBP9.18□□□□□ -0.94
TPM3-217ENST00000504663 SF3B6Q9Y3B4 125 aaKnown RBP9.18□□□□□ -0.94
TPM3-217ENST00000504663 PRRC2CQ9Y520 2896 aaKnown RBP9.18□□□□□ -0.94
TPM3-217ENST00000504663 ATRXP46100 2492 aa9.17□□□□□ -0.94
TPM3-217ENST00000504663 SHANK1Q9Y566 2161 aa9.17□□□□□ -0.94
TPM3-217ENST00000504663 OR14I1A6ND48 311 aa9.17□□□□□ -0.94
TPM3-217ENST00000504663 MYL12BO14950 172 aa9.17□□□□□ -0.94
TPM3-217ENST00000504663 SRSF10O75494 262 aaKnown RBP9.17□□□□□ -0.94
TPM3-217ENST00000504663 QDPRP09417 244 aa9.17□□□□□ -0.94
TPM3-217ENST00000504663 ATF4P18848 351 aaPredicted RBP9.17□□□□□ -0.94
TPM3-217ENST00000504663 MYL12AP19105 171 aa9.17□□□□□ -0.94
TPM3-217ENST00000504663 AGTR1P30556 359 aa9.17□□□□□ -0.94
TPM3-217ENST00000504663 CDAP32320 146 aa9.17□□□□□ -0.94
TPM3-217ENST00000504663 CENPAP49450 140 aa9.17□□□□□ -0.94
TPM3-217ENST00000504663 ENTPD1P49961 510 aa9.17□□□□□ -0.94
TPM3-217ENST00000504663 FOXG1P55316 489 aaPredicted RBP9.17□□□□□ -0.94
TPM3-217ENST00000504663 OR12D2P58182 307 aa9.17□□□□□ -0.94
TPM3-217ENST00000504663 HSF2Q03933 536 aa9.17□□□□□ -0.94
TPM3-217ENST00000504663 TPBGQ13641 420 aa9.17□□□□□ -0.94
TPM3-217ENST00000504663 CTF1Q16619 201 aa9.17□□□□□ -0.94
TPM3-217ENST00000504663 TSTQ16762 297 aaKnown RBP9.17□□□□□ -0.94
TPM3-217ENST00000504663 ARMCX4Q5H9R4 360 aa9.17□□□□□ -0.94
TPM3-217ENST00000504663 DNM1P34Q6PK57 102 aa9.17□□□□□ -0.94
TPM3-217ENST00000504663 DPY19L4Q7Z388 723 aa9.17□□□□□ -0.94
TPM3-217ENST00000504663 NUFIP2Q7Z417 695 aaKnown RBP9.17□□□□□ -0.94
TPM3-217ENST00000504663 GLB1L2Q8IW92 636 aa9.17□□□□□ -0.94
TPM3-217ENST00000504663 KLHL36Q8N4N3 616 aa9.17□□□□□ -0.94
TPM3-217ENST00000504663 C9orf106Q8NAJ2 232 aa9.17□□□□□ -0.94
TPM3-217ENST00000504663 OR10S1Q8NGN2 331 aa9.17□□□□□ -0.94
TPM3-217ENST00000504663 OR6N2Q8NGY6 317 aa9.17□□□□□ -0.94
TPM3-217ENST00000504663 OTOSQ8NHW6 89 aa9.17□□□□□ -0.94
TPM3-217ENST00000504663 NSMAFQ92636 917 aa9.17□□□□□ -0.94
TPM3-217ENST00000504663 ISOC1Q96CN7 298 aa9.17□□□□□ -0.94
TPM3-217ENST00000504663 PELI1Q96FA3 418 aa9.17□□□□□ -0.94
TPM3-217ENST00000504663 FUNDC2Q9BWH2 189 aa9.17□□□□□ -0.94
TPM3-217ENST00000504663 LINC00470Q9BZP3 86 aa9.17□□□□□ -0.94
TPM3-217ENST00000504663 FAM192AQ9GZU8 254 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms