RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 PMP2P02689 132 aa15.15■□□□□ 0.02
PCDHA1-203ENST00000504120 FAPQ12884 760 aa15.15■□□□□ 0.02
PCDHA1-203ENST00000504120 OR5H6Q8NGV6 325 aa15.15■□□□□ 0.02
PCDHA1-203ENST00000504120 ATOH1Q92858 354 aaPredicted RBP15.15■□□□□ 0.02
PCDHA1-203ENST00000504120 PIGTQ969N2 578 aa15.15■□□□□ 0.02
PCDHA1-203ENST00000504120 M0R082 166 aa15.15■□□□□ 0.02
PCDHA1-203ENST00000504120 PPICP45877 212 aa15.15■□□□□ 0.02
PCDHA1-203ENST00000504120 PRSS35Q8N3Z0 413 aa15.15■□□□□ 0.02
PCDHA1-203ENST00000504120 CHST11Q9NPF2 352 aa15.15■□□□□ 0.02
PCDHA1-203ENST00000504120 ISYNA1Q9NPH2 558 aa15.15■□□□□ 0.02
PCDHA1-203ENST00000504120 ACOXLQ9NUZ1 547 aa15.15■□□□□ 0.02
PCDHA1-203ENST00000504120 SDHAP31040 664 aa15.14■□□□□ 0.01
PCDHA1-203ENST00000504120 S100A11P31949 105 aa15.14■□□□□ 0.01
PCDHA1-203ENST00000504120 ZNF92Q03936 586 aa15.14■□□□□ 0.01
PCDHA1-203ENST00000504120 OR52W1Q6IF63 320 aa15.14■□□□□ 0.01
PCDHA1-203ENST00000504120 DCBLD2Q96PD2 775 aa15.14■□□□□ 0.01
PCDHA1-203ENST00000504120 LRP5LA4QPB2 252 aa15.14■□□□□ 0.01
PCDHA1-203ENST00000504120 H0YIG0 161 aa15.14■□□□□ 0.01
PCDHA1-203ENST00000504120 GABARAPH6UMI1 98 aa15.14■□□□□ 0.01
PCDHA1-203ENST00000504120 FZD6O60353 706 aa15.14■□□□□ 0.01
PCDHA1-203ENST00000504120 CXCL10P02778 98 aa15.14■□□□□ 0.01
PCDHA1-203ENST00000504120 TRAPPC2P0DI81 140 aa15.14■□□□□ 0.01
PCDHA1-203ENST00000504120 TRAPPC2BP0DI82 140 aa15.14■□□□□ 0.01
PCDHA1-203ENST00000504120 BCKDHBP21953 392 aa15.14■□□□□ 0.01
PCDHA1-203ENST00000504120 OMGP23515 440 aa15.14■□□□□ 0.01
PCDHA1-203ENST00000504120 BSGP35613 385 aa15.14■□□□□ 0.01
PCDHA1-203ENST00000504120 THBS3P49746 956 aa15.14■□□□□ 0.01
PCDHA1-203ENST00000504120 GP2P55259 537 aaKnown RBP15.14■□□□□ 0.01
PCDHA1-203ENST00000504120 EBPQ15125 230 aaKnown RBP15.14■□□□□ 0.01
PCDHA1-203ENST00000504120 ATPAF1Q5TC12 328 aaPredicted RBP15.14■□□□□ 0.01
PCDHA1-203ENST00000504120 HEPHL1Q6MZM0 1159 aa15.14■□□□□ 0.01
PCDHA1-203ENST00000504120 ACSM5Q6NUN0 579 aa15.14■□□□□ 0.01
PCDHA1-203ENST00000504120 VHLLQ6RSH7 139 aa15.14■□□□□ 0.01
PCDHA1-203ENST00000504120 CREB3L2Q70SY1 520 aa15.14■□□□□ 0.01
PCDHA1-203ENST00000504120 PLPP5Q8NEB5 264 aa15.14■□□□□ 0.01
PCDHA1-203ENST00000504120 LINC00615Q96LM1 132 aaPredicted RBP15.14■□□□□ 0.01
PCDHA1-203ENST00000504120 USB1Q9BQ65 265 aaKnown RBP15.14■□□□□ 0.01
PCDHA1-203ENST00000504120 LAT2Q9GZY6 243 aa15.14■□□□□ 0.01
PCDHA1-203ENST00000504120 HINT3Q9NQE9 182 aaKnown RBP15.14■□□□□ 0.01
PCDHA1-203ENST00000504120 MRPS2Q9Y399 296 aaKnown RBP15.14■□□□□ 0.01
PCDHA1-203ENST00000504120 A0A087WV62 115 aa15.14■□□□□ 0.01
PCDHA1-203ENST00000504120 PCSK6P29122 969 aa15.14■□□□□ 0.01
PCDHA1-203ENST00000504120 HSF1Q00613 529 aa15.14■□□□□ 0.01
PCDHA1-203ENST00000504120 LTC4SQ16873 150 aa15.14■□□□□ 0.01
PCDHA1-203ENST00000504120 TMEM99Q8N816 258 aa15.14■□□□□ 0.01
PCDHA1-203ENST00000504120 BCL7CQ8WUZ0 217 aaPredicted RBP15.14■□□□□ 0.01
PCDHA1-203ENST00000504120 DAZAP1Q96EP5 407 aaKnown RBP15.14■□□□□ 0.01
PCDHA1-203ENST00000504120 UHRF2Q96PU4 802 aa15.14■□□□□ 0.01
PCDHA1-203ENST00000504120 ECM29Q5VYK3 1845 aa15.14■□□□□ 0.01
PCDHA1-203ENST00000504120 DDOSTP39656 456 aa15.14■□□□□ 0.01
PCDHA1-203ENST00000504120 IAH1Q2TAA2 248 aaPredicted RBP15.14■□□□□ 0.01
PCDHA1-203ENST00000504120 DUSP21Q9H596 190 aa15.14■□□□□ 0.01
PCDHA1-203ENST00000504120 SCPEP1Q9HB40 452 aa15.14■□□□□ 0.01
PCDHA1-203ENST00000504120 PCDHGA5Q9Y5G8 931 aa15.14■□□□□ 0.01
PCDHA1-203ENST00000504120 CXorf51AA0A1B0GTR3 108 aa15.13■□□□□ 0.01
PCDHA1-203ENST00000504120 PHF1O43189 567 aaPredicted RBP15.13■□□□□ 0.01
PCDHA1-203ENST00000504120 TUSC2O75896 110 aa15.13■□□□□ 0.01
PCDHA1-203ENST00000504120 WNT11O96014 354 aa15.13■□□□□ 0.01
PCDHA1-203ENST00000504120 PRPH2P23942 346 aa15.13■□□□□ 0.01
PCDHA1-203ENST00000504120 UBE2KP61086 200 aa15.13■□□□□ 0.01
PCDHA1-203ENST00000504120 ZNF266Q14584 549 aa15.13■□□□□ 0.01
PCDHA1-203ENST00000504120 GLYR1Q49A26 553 aaPredicted RBP15.13■□□□□ 0.01
PCDHA1-203ENST00000504120 SHEQ5VZ18 495 aa15.13■□□□□ 0.01
PCDHA1-203ENST00000504120 OGFOD3Q6PK18 319 aa15.13■□□□□ 0.01
PCDHA1-203ENST00000504120 RIMKLAQ8IXN7 391 aa15.13■□□□□ 0.01
PCDHA1-203ENST00000504120 SEMA6DQ8NFY4 1073 aa15.13■□□□□ 0.01
PCDHA1-203ENST00000504120 OR4A16Q8NH70 328 aa15.13■□□□□ 0.01
PCDHA1-203ENST00000504120 LINC01599Q8WXQ3 324 aa15.13■□□□□ 0.01
PCDHA1-203ENST00000504120 LIN37Q96GY3 246 aaPredicted RBP15.13■□□□□ 0.01
PCDHA1-203ENST00000504120 SEMA4CQ9C0C4 833 aa15.13■□□□□ 0.01
PCDHA1-203ENST00000504120 NTNG1Q9Y2I2 539 aa15.13■□□□□ 0.01
PCDHA1-203ENST00000504120 IGHV3-20A0A0C4DH32 117 aa15.13■□□□□ 0.01
PCDHA1-203ENST00000504120 FAM71CQ8NEG0 241 aa15.13■□□□□ 0.01
PCDHA1-203ENST00000504120 APH1AQ96BI3 265 aa15.13■□□□□ 0.01
PCDHA1-203ENST00000504120 KIRREL1Q96J84 757 aa15.13■□□□□ 0.01
PCDHA1-203ENST00000504120 SLC25A19Q9HC21 320 aa15.13■□□□□ 0.01
PCDHA1-203ENST00000504120 SGCEO43556 437 aa15.13■□□□□ 0.01
PCDHA1-203ENST00000504120 SPI1P17947 270 aa15.13■□□□□ 0.01
PCDHA1-203ENST00000504120 CNR1P21554 472 aa15.13■□□□□ 0.01
PCDHA1-203ENST00000504120 HOXA1P49639 335 aaPredicted RBP15.13■□□□□ 0.01
PCDHA1-203ENST00000504120 DIO1P49895 249 aa15.13■□□□□ 0.01
PCDHA1-203ENST00000504120 PPT1P50897 306 aa15.13■□□□□ 0.01
PCDHA1-203ENST00000504120 TBC1D28Q2M2D7 210 aa15.13■□□□□ 0.01
PCDHA1-203ENST00000504120 CST9LP1Q5W188 147 aa15.13■□□□□ 0.01
PCDHA1-203ENST00000504120 CA13Q8N1Q1 262 aa15.13■□□□□ 0.01
PCDHA1-203ENST00000504120 CCDC74AQ96AQ1 378 aa15.13■□□□□ 0.01
PCDHA1-203ENST00000504120 WWTR1Q9GZV5 400 aa15.13■□□□□ 0.01
PCDHA1-203ENST00000504120 MOB1AQ9H8S9 216 aa15.13■□□□□ 0.01
PCDHA1-203ENST00000504120 COL5A3P25940 1745 aaPredicted RBP15.13■□□□□ 0.01
PCDHA1-203ENST00000504120 TPPPO94811 219 aa15.13■□□□□ 0.01
PCDHA1-203ENST00000504120 LGI3Q8N145 548 aa15.13■□□□□ 0.01
PCDHA1-203ENST00000504120 OR51A2Q8NGJ7 313 aa15.13■□□□□ 0.01
PCDHA1-203ENST00000504120 FAM213BQ8TBF2 198 aa15.13■□□□□ 0.01
PCDHA1-203ENST00000504120 ZMAT3Q9HA38 289 aaKnown RBP15.13■□□□□ 0.01
PCDHA1-203ENST00000504120 HRASLSQ9HDD0 168 aa15.13■□□□□ 0.01
PCDHA1-203ENST00000504120 HIST1H1CP16403 213 aaKnown RBP15.12■□□□□ 0.01
PCDHA1-203ENST00000504120 MORN4Q8NDC4 146 aa15.12■□□□□ 0.01
PCDHA1-203ENST00000504120 PHF7Q9BWX1 381 aaPredicted RBP15.12■□□□□ 0.01
PCDHA1-203ENST00000504120 FKRPQ9H9S5 495 aa15.12■□□□□ 0.01
PCDHA1-203ENST00000504120 TNFRSF12AQ9NP84 129 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms