RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 ANKDD1AQ495B1 522 aa10.27□□□□□ -0.77
MED28-203ENST00000503945 FAM120AOSQ5T036 256 aa10.27□□□□□ -0.77
MED28-203ENST00000503945 C10orf128Q5T292 105 aa10.27□□□□□ -0.77
MED28-203ENST00000503945 OAFQ86UD1 273 aa10.27□□□□□ -0.77
MED28-203ENST00000503945 ALDH16A1Q8IZ83 802 aa10.27□□□□□ -0.77
MED28-203ENST00000503945 OR51A7Q8NH64 312 aa10.27□□□□□ -0.77
MED28-203ENST00000503945 ZNF519Q8TB69 540 aa10.27□□□□□ -0.77
MED28-203ENST00000503945 SYNPRQ8TBG9 265 aa10.27□□□□□ -0.77
MED28-203ENST00000503945 NSMAFQ92636 917 aa10.27□□□□□ -0.77
MED28-203ENST00000503945 RDH5Q92781 318 aa10.27□□□□□ -0.77
MED28-203ENST00000503945 PRRC1Q96M27 445 aa10.27□□□□□ -0.77
MED28-203ENST00000503945 SEPHS2Q99611 448 aa10.27□□□□□ -0.77
MED28-203ENST00000503945 BCL2L14Q9BZR8 327 aa10.27□□□□□ -0.77
MED28-203ENST00000503945 CHODLQ9H9P2 273 aa10.27□□□□□ -0.77
MED28-203ENST00000503945 SMURF2Q9HAU4 748 aa10.27□□□□□ -0.77
MED28-203ENST00000503945 SLCO1C1Q9NYB5 712 aa10.27□□□□□ -0.77
MED28-203ENST00000503945 TAAR3PQ9P1P4 343 aa10.27□□□□□ -0.77
MED28-203ENST00000503945 RHCGQ9UBD6 479 aa10.27□□□□□ -0.77
MED28-203ENST00000503945 SVEP1Q4LDE5 3571 aa10.27□□□□□ -0.77
MED28-203ENST00000503945 A6NIZ1 184 aa10.26□□□□□ -0.77
MED28-203ENST00000503945 NPIPB13A6NJU9 1138 aa10.26□□□□□ -0.77
MED28-203ENST00000503945 NPIPB4C9JG80 1138 aa10.26□□□□□ -0.77
MED28-203ENST00000503945 HAX1O00165 279 aa10.26□□□□□ -0.77
MED28-203ENST00000503945 LILRA1O75019 489 aa10.26□□□□□ -0.77
MED28-203ENST00000503945 GMNNO75496 209 aa10.26□□□□□ -0.77
MED28-203ENST00000503945 SNAP29O95721 258 aa10.26□□□□□ -0.77
MED28-203ENST00000503945 IGFBP1P08833 259 aaPredicted RBP10.26□□□□□ -0.77
MED28-203ENST00000503945 TACSTD2P09758 323 aa10.26□□□□□ -0.77
MED28-203ENST00000503945 NAT2P11245 290 aa10.26□□□□□ -0.77
MED28-203ENST00000503945 ZNF250P15622 560 aa10.26□□□□□ -0.77
MED28-203ENST00000503945 ZNF16P17020 682 aaPredicted RBP10.26□□□□□ -0.77
MED28-203ENST00000503945 SRD5A1P18405 259 aa10.26□□□□□ -0.77
MED28-203ENST00000503945 DRD4P21917 467 aa10.26□□□□□ -0.77
MED28-203ENST00000503945 STOMP27105 288 aa10.26□□□□□ -0.77
MED28-203ENST00000503945 THBS2P35442 1172 aa10.26□□□□□ -0.77
MED28-203ENST00000503945 ZNF133P52736 654 aaPredicted RBP10.26□□□□□ -0.77
MED28-203ENST00000503945 RAP1BP61224 184 aa10.26□□□□□ -0.77
MED28-203ENST00000503945 RPL27P61353 136 aaKnown RBP10.26□□□□□ -0.77
MED28-203ENST00000503945 RAP1AP62834 184 aa10.26□□□□□ -0.77
MED28-203ENST00000503945 CD47Q08722 323 aa10.26□□□□□ -0.77
MED28-203ENST00000503945 NKPD1Q17RQ9 610 aa10.26□□□□□ -0.77
MED28-203ENST00000503945 MSMPQ1L6U9 139 aa10.26□□□□□ -0.77
MED28-203ENST00000503945 IFI44LQ53G44 452 aa10.26□□□□□ -0.77
MED28-203ENST00000503945 FAM27BQ5VT28 67 aa10.26□□□□□ -0.77
MED28-203ENST00000503945 TMEM154Q6P9G4 183 aa10.26□□□□□ -0.77
MED28-203ENST00000503945 ZNF730Q6ZMV8 503 aa10.26□□□□□ -0.77
MED28-203ENST00000503945 CBLL1Q75N03 491 aa10.26□□□□□ -0.77
MED28-203ENST00000503945 VTCN1Q7Z7D3 282 aa10.26□□□□□ -0.77
MED28-203ENST00000503945 CYP4Z1Q86W10 505 aa10.26□□□□□ -0.77
MED28-203ENST00000503945 NRMQ8IXM6 262 aa10.26□□□□□ -0.77
MED28-203ENST00000503945 LINC01356Q8N9X3 169 aa10.26□□□□□ -0.77
MED28-203ENST00000503945 CPEB3Q8NE35 698 aaKnown RBP10.26□□□□□ -0.77
MED28-203ENST00000503945 NOXO1Q8NFA2 376 aa10.26□□□□□ -0.77
MED28-203ENST00000503945 HDAC2Q92769 488 aaKnown RBP10.26□□□□□ -0.77
MED28-203ENST00000503945 CMTM5Q96DZ9 223 aa10.26□□□□□ -0.77
MED28-203ENST00000503945 ALG12Q9BV10 488 aa10.26□□□□□ -0.77
MED28-203ENST00000503945 C19orf24Q9BVV8 132 aa10.26□□□□□ -0.77
MED28-203ENST00000503945 HIF3AQ9Y2N7 669 aa10.26□□□□□ -0.77
MED28-203ENST00000503945 FAM32AQ9Y421 112 aaKnown RBP10.26□□□□□ -0.77
MED28-203ENST00000503945 TIMM10BQ9Y5J6 103 aa10.26□□□□□ -0.77
MED28-203ENST00000503945 SNX13Q9Y5W8 968 aa10.26□□□□□ -0.77
MED28-203ENST00000503945 EFCAB9A8MZ26 197 aa10.25□□□□□ -0.77
MED28-203ENST00000503945 SLC2A10O95528 541 aa10.25□□□□□ -0.77
MED28-203ENST00000503945 HPXP02790 462 aa10.25□□□□□ -0.77
MED28-203ENST00000503945 MT-ND5P03915 603 aa10.25□□□□□ -0.77
MED28-203ENST00000503945 MMP7P09237 267 aaPredicted RBP10.25□□□□□ -0.77
MED28-203ENST00000503945 MAKP20794 623 aa10.25□□□□□ -0.77
MED28-203ENST00000503945 ACHEP22303 614 aa10.25□□□□□ -0.77
MED28-203ENST00000503945 APEX1P27695 318 aaKnown RBP10.25□□□□□ -0.77
MED28-203ENST00000503945 CDAP32320 146 aa10.25□□□□□ -0.77
MED28-203ENST00000503945 RPL4P36578 427 aaKnown RBP10.25□□□□□ -0.77
MED28-203ENST00000503945 SLC9A3P48764 834 aa10.25□□□□□ -0.77
MED28-203ENST00000503945 SLC7A2P52569 658 aa10.25□□□□□ -0.77
MED28-203ENST00000503945 KLF3P57682 345 aaPredicted RBP10.25□□□□□ -0.77
MED28-203ENST00000503945 PCBD1P61457 104 aa10.25□□□□□ -0.77
MED28-203ENST00000503945 MRPS11P82912 194 aaKnown RBP10.25□□□□□ -0.77
MED28-203ENST00000503945 TOP3AQ13472 1001 aaPredicted RBP10.25□□□□□ -0.77
MED28-203ENST00000503945 MAD2L1BPQ15013 274 aaPredicted RBP10.25□□□□□ -0.77
MED28-203ENST00000503945 PABPC1L2AQ5JQF8 200 aa10.25□□□□□ -0.77
MED28-203ENST00000503945 FAM205BPQ63HN1 556 aa10.25□□□□□ -0.77
MED28-203ENST00000503945 SLC25A47Q6Q0C1 308 aa10.25□□□□□ -0.77
MED28-203ENST00000503945 HACD2Q6Y1H2 254 aa10.25□□□□□ -0.77
MED28-203ENST00000503945 IL17RELQ6ZVW7 336 aa10.25□□□□□ -0.77
MED28-203ENST00000503945 C1orf174Q8IYL3 243 aa10.25□□□□□ -0.77
MED28-203ENST00000503945 PAQR4Q8N4S7 273 aaPredicted RBP10.25□□□□□ -0.77
MED28-203ENST00000503945 ICA1LQ8NDH6 482 aa10.25□□□□□ -0.77
MED28-203ENST00000503945 SNX33Q8WV41 574 aa10.25□□□□□ -0.77
MED28-203ENST00000503945 GEMIN6Q8WXD5 167 aaKnown RBP10.25□□□□□ -0.77
MED28-203ENST00000503945 ACOT11Q8WXI4 607 aaPredicted RBP10.25□□□□□ -0.77
MED28-203ENST00000503945 FAM162AQ96A26 154 aa10.25□□□□□ -0.77
MED28-203ENST00000503945 SNX18Q96RF0 628 aa10.25□□□□□ -0.77
MED28-203ENST00000503945 KCTD14Q9BQ13 255 aaPredicted RBP10.25□□□□□ -0.77
MED28-203ENST00000503945 ELAC2Q9BQ52 826 aaKnown RBP10.25□□□□□ -0.77
MED28-203ENST00000503945 OR51B6Q9H340 312 aa10.25□□□□□ -0.77
MED28-203ENST00000503945 HINT3Q9NQE9 182 aaKnown RBP10.25□□□□□ -0.77
MED28-203ENST00000503945 DECR2Q9NUI1 292 aa10.25□□□□□ -0.77
MED28-203ENST00000503945 GRHPRQ9UBQ7 328 aa10.25□□□□□ -0.77
MED28-203ENST00000503945 TMEFF2Q9UIK5 374 aaPredicted RBP10.25□□□□□ -0.77
MED28-203ENST00000503945 RPS6KA6Q9UK32 745 aa10.25□□□□□ -0.77
MED28-203ENST00000503945 C17orf100A8MU93 164 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms