RNA–Protein interactions for RNA: ENST00000503418.5

UBE2D3-215, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-215ENST00000503418 ELFN2Q5R3F8 820 aa16.68■□□□□ 0.26
UBE2D3-215ENST00000503418 IGFN1Q86VF2 1251 aa16.68■□□□□ 0.26
UBE2D3-215ENST00000503418 OFCC1Q8IZS5 231 aa16.68■□□□□ 0.26
UBE2D3-215ENST00000503418 LRMDAQ9H2I8 198 aa16.68■□□□□ 0.26
UBE2D3-215ENST00000503418 TAAR3PQ9P1P4 343 aa16.68■□□□□ 0.26
UBE2D3-215ENST00000503418 ZNF346Q9UL40 294 aaKnown RBP16.68■□□□□ 0.26
UBE2D3-215ENST00000503418 TRAV27A0A087WT01 109 aa16.67■□□□□ 0.26
UBE2D3-215ENST00000503418 IGKV1D-43A0A0B4J1Z2 117 aa16.67■□□□□ 0.26
UBE2D3-215ENST00000503418 NPIPB13A6NJU9 1138 aa16.67■□□□□ 0.26
UBE2D3-215ENST00000503418 NPIPB4C9JG80 1138 aa16.67■□□□□ 0.26
UBE2D3-215ENST00000503418 NME4O00746 187 aa16.67■□□□□ 0.26
UBE2D3-215ENST00000503418 PHF1O43189 567 aaPredicted RBP16.67■□□□□ 0.26
UBE2D3-215ENST00000503418 CCDC22O60826 627 aa16.67■□□□□ 0.26
UBE2D3-215ENST00000503418 CLPTM1O96005 669 aa16.67■□□□□ 0.26
UBE2D3-215ENST00000503418 MMP7P09237 267 aaPredicted RBP16.67■□□□□ 0.26
UBE2D3-215ENST00000503418 NR2C1P13056 603 aa16.67■□□□□ 0.26
UBE2D3-215ENST00000503418 MAKP20794 623 aa16.67■□□□□ 0.26
UBE2D3-215ENST00000503418 CCNOP22674 350 aa16.67■□□□□ 0.26
UBE2D3-215ENST00000503418 KLF3P57682 345 aaPredicted RBP16.67■□□□□ 0.26
UBE2D3-215ENST00000503418 CTXN1P60606 82 aa16.67■□□□□ 0.26
UBE2D3-215ENST00000503418 MRPS34P82930 218 aaKnown RBP16.67■□□□□ 0.26
UBE2D3-215ENST00000503418 TRAM2Q15035 370 aa16.67■□□□□ 0.26
UBE2D3-215ENST00000503418 SGCAQ16586 387 aa16.67■□□□□ 0.26
UBE2D3-215ENST00000503418 FKBP9P1Q75LS8 142 aa16.67■□□□□ 0.26
UBE2D3-215ENST00000503418 NRMQ8IXM6 262 aa16.67■□□□□ 0.26
UBE2D3-215ENST00000503418 OR51A7Q8NH64 312 aa16.67■□□□□ 0.26
UBE2D3-215ENST00000503418 SYNPRQ8TBG9 265 aa16.67■□□□□ 0.26
UBE2D3-215ENST00000503418 GEMIN6Q8WXD5 167 aaKnown RBP16.67■□□□□ 0.26
UBE2D3-215ENST00000503418 TSPAN32Q96QS1 320 aa16.67■□□□□ 0.26
UBE2D3-215ENST00000503418 SIAEQ9HAT2 523 aa16.67■□□□□ 0.26
UBE2D3-215ENST00000503418 SMURF2Q9HAU4 748 aa16.67■□□□□ 0.26
UBE2D3-215ENST00000503418 MED4Q9NPJ6 270 aa16.67■□□□□ 0.26
UBE2D3-215ENST00000503418 UGT2A1Q9Y4X1 527 aa16.67■□□□□ 0.26
UBE2D3-215ENST00000503418 SVEP1Q4LDE5 3571 aa16.66■□□□□ 0.26
UBE2D3-215ENST00000503418 HTR3EA5X5Y0 456 aa16.66■□□□□ 0.26
UBE2D3-215ENST00000503418 SNAP29O95721 258 aa16.66■□□□□ 0.26
UBE2D3-215ENST00000503418 SERPINA1P01009 418 aa16.66■□□□□ 0.26
UBE2D3-215ENST00000503418 COL8A2P25067 703 aa16.66■□□□□ 0.26
UBE2D3-215ENST00000503418 RAD52P43351 418 aa16.66■□□□□ 0.26
UBE2D3-215ENST00000503418 NUDT2P50583 147 aa16.66■□□□□ 0.26
UBE2D3-215ENST00000503418 UCP2P55851 309 aa16.66■□□□□ 0.26
UBE2D3-215ENST00000503418 RPL27P61353 136 aaKnown RBP16.66■□□□□ 0.26
UBE2D3-215ENST00000503418 TAF11Q15544 211 aa16.66■□□□□ 0.26
UBE2D3-215ENST00000503418 IFI44LQ53G44 452 aa16.66■□□□□ 0.26
UBE2D3-215ENST00000503418 PABPC1L2AQ5JQF8 200 aa16.66■□□□□ 0.26
UBE2D3-215ENST00000503418 CLDN22Q8N7P3 220 aa16.66■□□□□ 0.26
UBE2D3-215ENST00000503418 SNX33Q8WV41 574 aa16.66■□□□□ 0.26
UBE2D3-215ENST00000503418 C11orf40Q8WZ69 217 aa16.66■□□□□ 0.26
UBE2D3-215ENST00000503418 TMEM158Q8WZ71 300 aa16.66■□□□□ 0.26
UBE2D3-215ENST00000503418 RDH5Q92781 318 aa16.66■□□□□ 0.26
UBE2D3-215ENST00000503418 HPS1Q92902 700 aa16.66■□□□□ 0.26
UBE2D3-215ENST00000503418 NABP1Q96AH0 204 aa16.66■□□□□ 0.26
UBE2D3-215ENST00000503418 NMD3Q96D46 503 aaKnown RBP16.66■□□□□ 0.26
UBE2D3-215ENST00000503418 HSH2DQ96JZ2 352 aa16.66■□□□□ 0.26
UBE2D3-215ENST00000503418 HOPXQ9BPY8 73 aaPredicted RBP16.66■□□□□ 0.26
UBE2D3-215ENST00000503418 ALG12Q9BV10 488 aa16.66■□□□□ 0.26
UBE2D3-215ENST00000503418 NARFLQ9H6Q4 476 aa16.66■□□□□ 0.26
UBE2D3-215ENST00000503418 MAN2C1Q9NTJ4 1040 aa16.66■□□□□ 0.26
UBE2D3-215ENST00000503418 GPR160Q9UJ42 338 aa16.66■□□□□ 0.26
UBE2D3-215ENST00000503418 MXRA5Q9NR99 2828 aa16.65■□□□□ 0.26
UBE2D3-215ENST00000503418 GMNCA6NCL1 334 aa16.65■□□□□ 0.26
UBE2D3-215ENST00000503418 EFCAB9A8MZ26 197 aa16.65■□□□□ 0.26
UBE2D3-215ENST00000503418 FFAR1O14842 300 aa16.65■□□□□ 0.26
UBE2D3-215ENST00000503418 MGRN1O60291 552 aa16.65■□□□□ 0.26
UBE2D3-215ENST00000503418 NCR1O76036 304 aa16.65■□□□□ 0.26
UBE2D3-215ENST00000503418 IGHMP01871 453 aa16.65■□□□□ 0.26
UBE2D3-215ENST00000503418 ZNF32P17041 273 aa16.65■□□□□ 0.26
UBE2D3-215ENST00000503418 ACHEP22303 614 aa16.65■□□□□ 0.26
UBE2D3-215ENST00000503418 GPR6P46095 362 aaPredicted RBP16.65■□□□□ 0.26
UBE2D3-215ENST00000503418 GSK3BP49841 420 aa16.65■□□□□ 0.26
UBE2D3-215ENST00000503418 ERVK-25P63136 954 aa16.65■□□□□ 0.26
UBE2D3-215ENST00000503418 CR1LQ2VPA4 569 aa16.65■□□□□ 0.26
UBE2D3-215ENST00000503418 SLC25A47Q6Q0C1 308 aa16.65■□□□□ 0.26
UBE2D3-215ENST00000503418 ZNF730Q6ZMV8 503 aa16.65■□□□□ 0.26
UBE2D3-215ENST00000503418 CBLL1Q75N03 491 aa16.65■□□□□ 0.26
UBE2D3-215ENST00000503418 OAFQ86UD1 273 aa16.65■□□□□ 0.26
UBE2D3-215ENST00000503418 TREML1Q86YW5 311 aa16.65■□□□□ 0.26
UBE2D3-215ENST00000503418 PHC2Q8IXK0 858 aa16.65■□□□□ 0.26
UBE2D3-215ENST00000503418 LINC01356Q8N9X3 169 aa16.65■□□□□ 0.26
UBE2D3-215ENST00000503418 CPEB3Q8NE35 698 aaKnown RBP16.65■□□□□ 0.26
UBE2D3-215ENST00000503418 OR13C2Q8NGS9 318 aa16.65■□□□□ 0.26
UBE2D3-215ENST00000503418 ZNF519Q8TB69 540 aa16.65■□□□□ 0.26
UBE2D3-215ENST00000503418 FAM162AQ96A26 154 aa16.65■□□□□ 0.26
UBE2D3-215ENST00000503418 RBP7Q96R05 134 aa16.65■□□□□ 0.26
UBE2D3-215ENST00000503418 BCL2L14Q9BZR8 327 aa16.65■□□□□ 0.26
UBE2D3-215ENST00000503418 EFCAB1Q9HAE3 211 aa16.65■□□□□ 0.26
UBE2D3-215ENST00000503418 ZNF250P15622 560 aa16.64■□□□□ 0.25
UBE2D3-215ENST00000503418 STOMP27105 288 aa16.64■□□□□ 0.25
UBE2D3-215ENST00000503418 MAGEB1P43366 347 aa16.64■□□□□ 0.25
UBE2D3-215ENST00000503418 PRKCDQ05655 676 aa16.64■□□□□ 0.25
UBE2D3-215ENST00000503418 THEM4Q5T1C6 240 aa16.64■□□□□ 0.25
UBE2D3-215ENST00000503418 FAM205BPQ63HN1 556 aa16.64■□□□□ 0.25
UBE2D3-215ENST00000503418 TMEM154Q6P9G4 183 aa16.64■□□□□ 0.25
UBE2D3-215ENST00000503418 LRRC75AQ8NAA5 344 aa16.64■□□□□ 0.25
UBE2D3-215ENST00000503418 OR1J1Q8NGS3 322 aa16.64■□□□□ 0.25
UBE2D3-215ENST00000503418 AKR7LQ8NHP1 331 aa16.64■□□□□ 0.25
UBE2D3-215ENST00000503418 ACOT11Q8WXI4 607 aaPredicted RBP16.64■□□□□ 0.25
UBE2D3-215ENST00000503418 YIPF5Q969M3 257 aa16.64■□□□□ 0.25
UBE2D3-215ENST00000503418 KCTD14Q9BQ13 255 aaPredicted RBP16.64■□□□□ 0.25
UBE2D3-215ENST00000503418 REPIN1Q9BWE0 567 aaKnown RBP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms