RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 DEFB103AP81534 67 aa3.66□□□□□ -1.82
HMGB1P21-201ENST00000502313 RPL24P83731 157 aaKnown RBP3.66□□□□□ -1.82
HMGB1P21-201ENST00000502313 COL10A1Q03692 680 aa3.66□□□□□ -1.82
HMGB1P21-201ENST00000502313 LTBQ06643 244 aa3.66□□□□□ -1.82
HMGB1P21-201ENST00000502313 CYP24A1Q07973 514 aa3.66□□□□□ -1.82
HMGB1P21-201ENST00000502313 GAGE1Q13065 139 aa3.66□□□□□ -1.82
HMGB1P21-201ENST00000502313 GAGE4Q13068 117 aa3.66□□□□□ -1.82
HMGB1P21-201ENST00000502313 FAM189A2Q15884 450 aa3.66□□□□□ -1.82
HMGB1P21-201ENST00000502313 SNCBQ16143 134 aa3.66□□□□□ -1.82
HMGB1P21-201ENST00000502313 DUSP7Q16829 419 aa3.66□□□□□ -1.82
HMGB1P21-201ENST00000502313 TIGITQ495A1 244 aa3.66□□□□□ -1.82
HMGB1P21-201ENST00000502313 ATP1A1-AS1Q5TC04 95 aa3.66□□□□□ -1.82
HMGB1P21-201ENST00000502313 KHDRBS2Q5VWX1 349 aaKnown RBP3.66□□□□□ -1.82
HMGB1P21-201ENST00000502313 PRMT9Q6P2P2 845 aa3.66□□□□□ -1.82
HMGB1P21-201ENST00000502313 CLEC18BQ6UXF7 455 aa3.66□□□□□ -1.82
HMGB1P21-201ENST00000502313 ADAMTSL5Q6ZMM2 481 aa3.66□□□□□ -1.82
HMGB1P21-201ENST00000502313 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.66□□□□□ -1.82
HMGB1P21-201ENST00000502313 PEX26Q7Z412 305 aa3.66□□□□□ -1.82
HMGB1P21-201ENST00000502313 CROCCP2Q86T23 111 aa3.66□□□□□ -1.82
HMGB1P21-201ENST00000502313 SETD3Q86TU7 594 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P21-201ENST00000502313 GGNQ86UU5 652 aa3.66□□□□□ -1.82
HMGB1P21-201ENST00000502313 STX12Q86Y82 276 aa3.66□□□□□ -1.82
HMGB1P21-201ENST00000502313 OR4N5Q8IXE1 308 aa3.66□□□□□ -1.82
HMGB1P21-201ENST00000502313 IFT20Q8IY31 132 aa3.66□□□□□ -1.82
HMGB1P21-201ENST00000502313 ZBED8Q8IZ13 594 aa3.66□□□□□ -1.82
HMGB1P21-201ENST00000502313 MS4A15Q8N5U1 240 aa3.66□□□□□ -1.82
HMGB1P21-201ENST00000502313 ZNF383Q8NA42 475 aa3.66□□□□□ -1.82
HMGB1P21-201ENST00000502313 CLEC18CQ8NCF0 446 aa3.66□□□□□ -1.82
HMGB1P21-201ENST00000502313 TMEM35BQ8NCS4 154 aa3.66□□□□□ -1.82
HMGB1P21-201ENST00000502313 BAALCQ8WXS3 180 aa3.66□□□□□ -1.82
HMGB1P21-201ENST00000502313 RPL36ALQ969Q0 106 aaKnown RBP3.66□□□□□ -1.82
HMGB1P21-201ENST00000502313 TMEM143Q96AN5 459 aa3.66□□□□□ -1.82
HMGB1P21-201ENST00000502313 FAF2Q96CS3 445 aa3.66□□□□□ -1.82
HMGB1P21-201ENST00000502313 DUS3LQ96G46 650 aaKnown RBP3.66□□□□□ -1.82
HMGB1P21-201ENST00000502313 B3GALT6Q96L58 329 aa3.66□□□□□ -1.82
HMGB1P21-201ENST00000502313 PPP1R36Q96LQ0 422 aa3.66□□□□□ -1.82
HMGB1P21-201ENST00000502313 TNFRSF13CQ96RJ3 184 aa3.66□□□□□ -1.82
HMGB1P21-201ENST00000502313 RNF2Q99496 336 aa3.66□□□□□ -1.82
HMGB1P21-201ENST00000502313 CDX2Q99626 313 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P21-201ENST00000502313 ECSITQ9BQ95 431 aa3.66□□□□□ -1.82
HMGB1P21-201ENST00000502313 APOL2Q9BQE5 337 aa3.66□□□□□ -1.82
HMGB1P21-201ENST00000502313 PSD2Q9BQI7 771 aa3.66□□□□□ -1.82
HMGB1P21-201ENST00000502313 ZNF251Q9BRH9 671 aa3.66□□□□□ -1.82
HMGB1P21-201ENST00000502313 UTP23Q9BRU9 249 aaKnown RBP3.66□□□□□ -1.82
HMGB1P21-201ENST00000502313 PAPOLGQ9BWT3 736 aaKnown RBP3.66□□□□□ -1.82
HMGB1P21-201ENST00000502313 KRTAP4-5Q9BYR2 181 aa3.66□□□□□ -1.82
HMGB1P21-201ENST00000502313 NIPAL2Q9H841 368 aa3.66□□□□□ -1.82
HMGB1P21-201ENST00000502313 RRAGDQ9NQL2 400 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P21-201ENST00000502313 XPNPEP1Q9NQW7 623 aa3.66□□□□□ -1.82
HMGB1P21-201ENST00000502313 AGPAT4Q9NRZ5 378 aa3.66□□□□□ -1.82
HMGB1P21-201ENST00000502313 PARVAQ9NVD7 372 aa3.66□□□□□ -1.82
HMGB1P21-201ENST00000502313 IL37Q9NZH6 218 aa3.66□□□□□ -1.82
HMGB1P21-201ENST00000502313 UVRAGQ9P2Y5 699 aa3.66□□□□□ -1.82
HMGB1P21-201ENST00000502313 LNPEPQ9UIQ6 1025 aa3.66□□□□□ -1.82
HMGB1P21-201ENST00000502313 PYCARDQ9ULZ3 195 aa3.66□□□□□ -1.82
HMGB1P21-201ENST00000502313 GMPPBQ9Y5P6 360 aa3.66□□□□□ -1.82
HMGB1P21-201ENST00000502313 INSL5Q9Y5Q6 135 aa3.66□□□□□ -1.82
HMGB1P21-201ENST00000502313 MUC6Q6W4X9 2439 aa3.66□□□□□ -1.82
HMGB1P21-201ENST00000502313 WDR81Q562E7 1941 aa3.66□□□□□ -1.82
HMGB1P21-201ENST00000502313 MICAL3Q7RTP6 2002 aa3.65□□□□□ -1.82
HMGB1P21-201ENST00000502313 UQCRHLA0A096LP55 91 aa3.65□□□□□ -1.83
HMGB1P21-201ENST00000502313 TCRBV9S1A1TA0A576 114 aa3.65□□□□□ -1.83
HMGB1P21-201ENST00000502313 CENPXA8MT69 81 aa3.65□□□□□ -1.83
HMGB1P21-201ENST00000502313 NEDD8-MDP1E9PL57 170 aa3.65□□□□□ -1.83
HMGB1P21-201ENST00000502313 BLOC1S5-TXNDC5H3BN57 136 aa3.65□□□□□ -1.83
HMGB1P21-201ENST00000502313 H3BN98 237 aa3.65□□□□□ -1.83
HMGB1P21-201ENST00000502313 SOCS2O14508 198 aa3.65□□□□□ -1.83
HMGB1P21-201ENST00000502313 NDUFAB1O14561 156 aa3.65□□□□□ -1.83
HMGB1P21-201ENST00000502313 HSD17B6O14756 317 aa3.65□□□□□ -1.83
HMGB1P21-201ENST00000502313 TNFRSF13BO14836 293 aaPredicted RBP3.65□□□□□ -1.83
HMGB1P21-201ENST00000502313 AQP9O43315 295 aa3.65□□□□□ -1.83
HMGB1P21-201ENST00000502313 PCDH7O60245 1069 aa3.65□□□□□ -1.83
HMGB1P21-201ENST00000502313 EIF4E2O60573 245 aaKnown RBP3.65□□□□□ -1.83
HMGB1P21-201ENST00000502313 ZMPSTE24O75844 475 aa3.65□□□□□ -1.83
HMGB1P21-201ENST00000502313 CDK2AP2O75956 126 aa3.65□□□□□ -1.83
HMGB1P21-201ENST00000502313 LDOC1O95751 146 aaPredicted RBP3.65□□□□□ -1.83
HMGB1P21-201ENST00000502313 IGHG4P01861 327 aa3.65□□□□□ -1.83
HMGB1P21-201ENST00000502313 CALB1P05937 261 aa3.65□□□□□ -1.83
HMGB1P21-201ENST00000502313 PRSS2P07478 247 aa3.65□□□□□ -1.83
HMGB1P21-201ENST00000502313 UQCRHP07919 91 aa3.65□□□□□ -1.83
HMGB1P21-201ENST00000502313 RETP07949 1114 aa3.65□□□□□ -1.83
HMGB1P21-201ENST00000502313 PAEPP09466 180 aa3.65□□□□□ -1.83
HMGB1P21-201ENST00000502313 MYOGP15173 224 aa3.65□□□□□ -1.83
HMGB1P21-201ENST00000502313 GATA1P15976 413 aaPredicted RBP3.65□□□□□ -1.83
HMGB1P21-201ENST00000502313 CTRB1P17538 263 aa3.65□□□□□ -1.83
HMGB1P21-201ENST00000502313 BGNP21810 368 aa3.65□□□□□ -1.83
HMGB1P21-201ENST00000502313 CA6P23280 308 aa3.65□□□□□ -1.83
HMGB1P21-201ENST00000502313 PDHA2P29803 388 aa3.65□□□□□ -1.83
HMGB1P21-201ENST00000502313 OPRD1P41143 372 aa3.65□□□□□ -1.83
HMGB1P21-201ENST00000502313 MAP3K8P41279 467 aa3.65□□□□□ -1.83
HMGB1P21-201ENST00000502313 GCLMP48507 274 aa3.65□□□□□ -1.83
HMGB1P21-201ENST00000502313 HMGA2P52926 109 aa3.65□□□□□ -1.83
HMGB1P21-201ENST00000502313 KRTAP10-2P60368 255 aa3.65□□□□□ -1.83
HMGB1P21-201ENST00000502313 ERVK11-1P61568 191 aa3.65□□□□□ -1.83
HMGB1P21-201ENST00000502313 EEF1A1P68104 462 aaKnown RBP3.65□□□□□ -1.83
HMGB1P21-201ENST00000502313 TFAMQ00059 246 aaKnown RBP3.65□□□□□ -1.83
HMGB1P21-201ENST00000502313 IL9RQ01113 521 aa3.65□□□□□ -1.83
HMGB1P21-201ENST00000502313 CDR2Q01850 454 aa3.65□□□□□ -1.83
HMGB1P21-201ENST00000502313 ZNF33AQ06730 810 aa3.65□□□□□ -1.83
HMGB1P21-201ENST00000502313 PPIDQ08752 370 aaKnown RBP3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms