RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 ZNF547Q8IVP9 402 aa5.02□□□□□ -1.61
BRCA1-224ENST00000497488 SPAG16Q8N0X2 631 aa5.02□□□□□ -1.61
BRCA1-224ENST00000497488 SNX31Q8N9S9 440 aa5.02□□□□□ -1.61
BRCA1-224ENST00000497488 SUMF1Q8NBK3 374 aa5.02□□□□□ -1.61
BRCA1-224ENST00000497488 SLC7A13Q8TCU3 470 aa5.02□□□□□ -1.61
BRCA1-224ENST00000497488 PYROXD1Q8WU10 500 aa5.02□□□□□ -1.61
BRCA1-224ENST00000497488 SMARCD2Q92925 531 aa5.02□□□□□ -1.61
BRCA1-224ENST00000497488 OR8B4Q96RC9 309 aa5.02□□□□□ -1.61
BRCA1-224ENST00000497488 ZNF251Q9BRH9 671 aa5.02□□□□□ -1.61
BRCA1-224ENST00000497488 WDR13Q9H1Z4 485 aa5.02□□□□□ -1.61
BRCA1-224ENST00000497488 CWH43Q9H720 699 aa5.02□□□□□ -1.61
BRCA1-224ENST00000497488 SAMSN1Q9NSI8 373 aaKnown RBP5.02□□□□□ -1.61
BRCA1-224ENST00000497488 B3GNT2Q9NY97 397 aa5.02□□□□□ -1.61
BRCA1-224ENST00000497488 THYN1Q9P016 225 aa5.02□□□□□ -1.61
BRCA1-224ENST00000497488 ZNF282Q9UDV7 671 aaPredicted RBP5.02□□□□□ -1.61
BRCA1-224ENST00000497488 AFDNP55196 1824 aaKnown RBP5.02□□□□□ -1.61
BRCA1-224ENST00000497488 CDHR2Q9BYE9 1310 aa5.01□□□□□ -1.61
BRCA1-224ENST00000497488 A0A1B0GTH9 108 aa5.01□□□□□ -1.61
BRCA1-224ENST00000497488 TMEM210A6NLX4 147 aa5.01□□□□□ -1.61
BRCA1-224ENST00000497488 TOX3O15405 576 aaPredicted RBP5.01□□□□□ -1.61
BRCA1-224ENST00000497488 TRMUO75648 421 aaKnown RBP5.01□□□□□ -1.61
BRCA1-224ENST00000497488 CLIC3O95833 236 aa5.01□□□□□ -1.61
BRCA1-224ENST00000497488 TRIM49P0CI25 452 aa5.01□□□□□ -1.61
BRCA1-224ENST00000497488 TRIM49CP0CI26 452 aa5.01□□□□□ -1.61
BRCA1-224ENST00000497488 RD3LP0DJH9 198 aa5.01□□□□□ -1.61
BRCA1-224ENST00000497488 EVI2BP34910 448 aa5.01□□□□□ -1.61
BRCA1-224ENST00000497488 MFAP2P55001 183 aa5.01□□□□□ -1.61
BRCA1-224ENST00000497488 ERVK-16P61578 105 aa5.01□□□□□ -1.61
BRCA1-224ENST00000497488 IL18R1Q13478 541 aa5.01□□□□□ -1.61
BRCA1-224ENST00000497488 MS4A13Q5J8X5 152 aa5.01□□□□□ -1.61
BRCA1-224ENST00000497488 SAPCD1Q5SSQ6 148 aa5.01□□□□□ -1.61
BRCA1-224ENST00000497488 REP15Q6BDI9 236 aa5.01□□□□□ -1.61
BRCA1-224ENST00000497488 CREB3L2Q70SY1 520 aa5.01□□□□□ -1.61
BRCA1-224ENST00000497488 C16orf82Q7Z2V1 217 aa5.01□□□□□ -1.61
BRCA1-224ENST00000497488 PAGE2Q7Z2X7 111 aa5.01□□□□□ -1.61
BRCA1-224ENST00000497488 PTAR1Q7Z6K3 402 aaPredicted RBP5.01□□□□□ -1.61
BRCA1-224ENST00000497488 NFE4Q86UQ8 179 aa5.01□□□□□ -1.61
BRCA1-224ENST00000497488 BOD1L2Q8IYS8 172 aa5.01□□□□□ -1.61
BRCA1-224ENST00000497488 EID2Q8N6I1 236 aa5.01□□□□□ -1.61
BRCA1-224ENST00000497488 IQCF1Q8N6M8 205 aa5.01□□□□□ -1.61
BRCA1-224ENST00000497488 ZNF491Q8N8L2 437 aa5.01□□□□□ -1.61
BRCA1-224ENST00000497488 OR5B3Q8NH48 314 aa5.01□□□□□ -1.61
BRCA1-224ENST00000497488 SPPL2AQ8TCT8 520 aa5.01□□□□□ -1.61
BRCA1-224ENST00000497488 ACER1Q8TDN7 264 aa5.01□□□□□ -1.61
BRCA1-224ENST00000497488 SECTM1Q8WVN6 248 aa5.01□□□□□ -1.61
BRCA1-224ENST00000497488 CCDC127Q96BQ5 260 aa5.01□□□□□ -1.61
BRCA1-224ENST00000497488 HSFY1Q96LI6 401 aa5.01□□□□□ -1.61
BRCA1-224ENST00000497488 EPYCQ99645 322 aa5.01□□□□□ -1.61
BRCA1-224ENST00000497488 UTP23Q9BRU9 249 aaKnown RBP5.01□□□□□ -1.61
BRCA1-224ENST00000497488 VCX3BQ9H321 246 aa5.01□□□□□ -1.61
BRCA1-224ENST00000497488 WDR55Q9H6Y2 383 aaPredicted RBP5.01□□□□□ -1.61
BRCA1-224ENST00000497488 DEPPQ9NTK1 212 aa5.01□□□□□ -1.61
BRCA1-224ENST00000497488 RMND1Q9NWS8 449 aa5.01□□□□□ -1.61
BRCA1-224ENST00000497488 FBXO7Q9Y3I1 522 aa5.01□□□□□ -1.61
BRCA1-224ENST00000497488 ABCC12Q96J65 1359 aa5.01□□□□□ -1.61
BRCA1-224ENST00000497488 BRCA1P38398 1863 aaKnown RBP5□□□□□ -1.61
BRCA1-224ENST00000497488 ANKRD31Q8N7Z5 1873 aa5□□□□□ -1.61
BRCA1-224ENST00000497488 FRMPD3Q5JV73 1810 aa5□□□□□ -1.61
BRCA1-224ENST00000497488 TNRC6CQ9HCJ0 1690 aaKnown RBP5□□□□□ -1.61
BRCA1-224ENST00000497488 G3V2L1 256 aa5□□□□□ -1.61
BRCA1-224ENST00000497488 C16orf97H3BN30 126 aa5□□□□□ -1.61
BRCA1-224ENST00000497488 K7EQD1 137 aa5□□□□□ -1.61
BRCA1-224ENST00000497488 SULT2B1O00204 365 aa5□□□□□ -1.61
BRCA1-224ENST00000497488 PLPP1O14494 284 aa5□□□□□ -1.61
BRCA1-224ENST00000497488 DYNC1I1O14576 645 aa5□□□□□ -1.61
BRCA1-224ENST00000497488 SLC9A3R1O14745 358 aaPredicted RBP5□□□□□ -1.61
BRCA1-224ENST00000497488 TNFSF11O14788 317 aa5□□□□□ -1.61
BRCA1-224ENST00000497488 TRAPPC3O43617 180 aa5□□□□□ -1.61
BRCA1-224ENST00000497488 PCDH7O60245 1069 aa5□□□□□ -1.61
BRCA1-224ENST00000497488 RAMP2O60895 175 aa5□□□□□ -1.61
BRCA1-224ENST00000497488 CLDN11O75508 207 aa5□□□□□ -1.61
BRCA1-224ENST00000497488 EEDO75530 441 aaKnown RBP5□□□□□ -1.61
BRCA1-224ENST00000497488 NXPH4O95158 308 aa5□□□□□ -1.61
BRCA1-224ENST00000497488 LDOC1O95751 146 aaPredicted RBP5□□□□□ -1.61
BRCA1-224ENST00000497488 IGHV3-9P01782 118 aa5□□□□□ -1.61
BRCA1-224ENST00000497488 SERPINA5P05154 406 aa5□□□□□ -1.61
BRCA1-224ENST00000497488 CD55P08174 381 aa5□□□□□ -1.61
BRCA1-224ENST00000497488 CELA2AP08217 269 aa5□□□□□ -1.61
BRCA1-224ENST00000497488 SLC35E2BP0CK96 405 aa5□□□□□ -1.61
BRCA1-224ENST00000497488 IGFBP5P24593 272 aa5□□□□□ -1.61
BRCA1-224ENST00000497488 OR1E1P30953 314 aa5□□□□□ -1.61
BRCA1-224ENST00000497488 CALCRP30988 508 aa5□□□□□ -1.61
BRCA1-224ENST00000497488 KDELR2P33947 212 aa5□□□□□ -1.61
BRCA1-224ENST00000497488 MAGEA6P43360 314 aa5□□□□□ -1.61
BRCA1-224ENST00000497488 SSR4P51571 173 aa5□□□□□ -1.61
BRCA1-224ENST00000497488 CLDN6P56747 220 aa5□□□□□ -1.61
BRCA1-224ENST00000497488 PRPS1P60891 318 aa5□□□□□ -1.61
BRCA1-224ENST00000497488 ERVK11-1P61568 191 aa5□□□□□ -1.61
BRCA1-224ENST00000497488 BASP1P80723 227 aaKnown RBP5□□□□□ -1.61
BRCA1-224ENST00000497488 CHRNB3Q05901 458 aa5□□□□□ -1.61
BRCA1-224ENST00000497488 KIAA0141Q14154 515 aaPredicted RBP5□□□□□ -1.61
BRCA1-224ENST00000497488 TEAD2Q15562 447 aa5□□□□□ -1.61
BRCA1-224ENST00000497488 ZBTB6Q15916 424 aa5□□□□□ -1.61
BRCA1-224ENST00000497488 KYAT1Q16773 422 aa5□□□□□ -1.61
BRCA1-224ENST00000497488 KIAA1644Q3SXP7 199 aa5□□□□□ -1.61
BRCA1-224ENST00000497488 CCDC14Q49A88 953 aa5□□□□□ -1.61
BRCA1-224ENST00000497488 PXDC1Q5TGL8 231 aa5□□□□□ -1.61
BRCA1-224ENST00000497488 ADNP2Q6IQ32 1131 aa5□□□□□ -1.61
BRCA1-224ENST00000497488 CD300LGQ6UXG3 332 aa5□□□□□ -1.61
BRCA1-224ENST00000497488 TRPT1Q86TN4 253 aaKnown RBP5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms