RNA–Protein interactions for RNA: ENST00000497022.1

VPS26A-208, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-208ENST00000497022 MAGEE2Q8TD90 523 aaPredicted RBP1.43□□□□□ -2.18
VPS26A-208ENST00000497022 EFHD2Q96C19 240 aaPredicted RBP1.43□□□□□ -2.18
VPS26A-208ENST00000497022 WFIKKN1Q96NZ8 548 aa1.43□□□□□ -2.18
VPS26A-208ENST00000497022 OXGR1Q96P68 337 aa1.43□□□□□ -2.18
VPS26A-208ENST00000497022 CLCC1Q96S66 551 aa1.43□□□□□ -2.18
VPS26A-208ENST00000497022 CHAC1Q9BUX1 264 aa1.43□□□□□ -2.18
VPS26A-208ENST00000497022 NUP58Q9BVL2 599 aa1.43□□□□□ -2.18
VPS26A-208ENST00000497022 NHEJ1Q9H9Q4 299 aaPredicted RBP1.43□□□□□ -2.18
VPS26A-208ENST00000497022 POLE4Q9NR33 117 aa1.43□□□□□ -2.18
VPS26A-208ENST00000497022 RAB20Q9NX57 234 aa1.43□□□□□ -2.18
VPS26A-208ENST00000497022 CALYQ9NYX4 217 aa1.43□□□□□ -2.18
VPS26A-208ENST00000497022 SPATA7Q9P0W8 599 aa1.43□□□□□ -2.18
VPS26A-208ENST00000497022 ZNRD1Q9P1U0 126 aa1.43□□□□□ -2.18
VPS26A-208ENST00000497022 TMED5Q9Y3A6 229 aa1.43□□□□□ -2.18
VPS26A-208ENST00000497022 NPTNQ9Y639 398 aa1.43□□□□□ -2.18
VPS26A-208ENST00000497022 RPAP1Q9BWH6 1393 aaPredicted RBP1.43□□□□□ -2.18
VPS26A-208ENST00000497022 ATP10AO60312 1499 aa1.43□□□□□ -2.18
VPS26A-208ENST00000497022 A0A1W2PPE3 182 aa1.42□□□□□ -2.18
VPS26A-208ENST00000497022 HEATR9A2RTY3 570 aa1.42□□□□□ -2.18
VPS26A-208ENST00000497022 GOLGA8SH3BPF8 625 aa1.42□□□□□ -2.18
VPS26A-208ENST00000497022 HAS3O00219 553 aa1.42□□□□□ -2.18
VPS26A-208ENST00000497022 UPK3AO75631 287 aa1.42□□□□□ -2.18
VPS26A-208ENST00000497022 KRT14P02533 472 aa1.42□□□□□ -2.18
VPS26A-208ENST00000497022 GAPDHP04406 335 aaKnown RBP1.42□□□□□ -2.18
VPS26A-208ENST00000497022 CRYGBP07316 175 aa1.42□□□□□ -2.18
VPS26A-208ENST00000497022 PRPS2P11908 318 aa1.42□□□□□ -2.18
VPS26A-208ENST00000497022 ATP1B2P14415 290 aaPredicted RBP1.42□□□□□ -2.18
VPS26A-208ENST00000497022 GALP22466 123 aa1.42□□□□□ -2.18
VPS26A-208ENST00000497022 GNA11P29992 359 aa1.42□□□□□ -2.18
VPS26A-208ENST00000497022 RDXP35241 583 aaKnown RBP1.42□□□□□ -2.18
VPS26A-208ENST00000497022 ATP5OP48047 213 aa1.42□□□□□ -2.18
VPS26A-208ENST00000497022 PRRX1P54821 245 aa1.42□□□□□ -2.18
VPS26A-208ENST00000497022 RAP1AP62834 184 aa1.42□□□□□ -2.18
VPS26A-208ENST00000497022 CDK16Q00536 496 aa1.42□□□□□ -2.18
VPS26A-208ENST00000497022 TGM3Q08188 693 aa1.42□□□□□ -2.18
VPS26A-208ENST00000497022 BST2Q10589 180 aaKnown RBP1.42□□□□□ -2.18
VPS26A-208ENST00000497022 RCN1Q15293 331 aa1.42□□□□□ -2.18
VPS26A-208ENST00000497022 IGFBP7Q16270 282 aa1.42□□□□□ -2.18
VPS26A-208ENST00000497022 DMRTC1Q5HYR2 192 aa1.42□□□□□ -2.18
VPS26A-208ENST00000497022 PRAMEF20Q5VT98 475 aa1.42□□□□□ -2.18
VPS26A-208ENST00000497022 RNASEKQ6P5S7 137 aaKnown RBP1.42□□□□□ -2.18
VPS26A-208ENST00000497022 ENPP6Q6UWR7 440 aa1.42□□□□□ -2.18
VPS26A-208ENST00000497022 UTS2BQ765I0 119 aa1.42□□□□□ -2.18
VPS26A-208ENST00000497022 BHLHA15Q7RTS1 189 aaPredicted RBP1.42□□□□□ -2.18
VPS26A-208ENST00000497022 WDR86Q86TI4 376 aa1.42□□□□□ -2.18
VPS26A-208ENST00000497022 TRIM69Q86WT6 500 aa1.42□□□□□ -2.18
VPS26A-208ENST00000497022 RIMKLAQ8IXN7 391 aa1.42□□□□□ -2.18
VPS26A-208ENST00000497022 CCDC65Q8IXS2 484 aa1.42□□□□□ -2.18
VPS26A-208ENST00000497022 SDR9C7Q8NEX9 313 aa1.42□□□□□ -2.18
VPS26A-208ENST00000497022 UBE2E3Q969T4 207 aa1.42□□□□□ -2.18
VPS26A-208ENST00000497022 CXorf40BQ96DE9 158 aa1.42□□□□□ -2.18
VPS26A-208ENST00000497022 C12orf42Q96LP6 360 aa1.42□□□□□ -2.18
VPS26A-208ENST00000497022 RNF2Q99496 336 aa1.42□□□□□ -2.18
VPS26A-208ENST00000497022 GBA3Q9H227 469 aa1.42□□□□□ -2.18
VPS26A-208ENST00000497022 LINC00597Q9H2U6 94 aa1.42□□□□□ -2.18
VPS26A-208ENST00000497022 NCOR1P1Q9H4R4 102 aa1.42□□□□□ -2.18
VPS26A-208ENST00000497022 ANKRD19PQ9H560 264 aa1.42□□□□□ -2.18
VPS26A-208ENST00000497022 AZI2Q9H6S1 392 aa1.42□□□□□ -2.18
VPS26A-208ENST00000497022 NMRAL1Q9HBL8 299 aa1.42□□□□□ -2.18
VPS26A-208ENST00000497022 NT5MQ9NPB1 228 aa1.42□□□□□ -2.18
VPS26A-208ENST00000497022 SLC2A8Q9NY64 477 aa1.42□□□□□ -2.18
VPS26A-208ENST00000497022 BFARQ9NZS9 450 aa1.42□□□□□ -2.18
VPS26A-208ENST00000497022 PISDQ9UG56 409 aa1.42□□□□□ -2.18
VPS26A-208ENST00000497022 IKZF2Q9UKS7 526 aa1.42□□□□□ -2.18
VPS26A-208ENST00000497022 CAB39Q9Y376 341 aaPredicted RBP1.42□□□□□ -2.18
VPS26A-208ENST00000497022 PEX16Q9Y5Y5 336 aa1.42□□□□□ -2.18
VPS26A-208ENST00000497022 TMEM14AQ9Y6G1 99 aa1.42□□□□□ -2.18
VPS26A-208ENST00000497022 A0A075B6Q4 140 aa1.41□□□□□ -2.18
VPS26A-208ENST00000497022 A0A1W2PPV9 198 aa1.41□□□□□ -2.18
VPS26A-208ENST00000497022 TCRBV9S1A1TA0A576 114 aa1.41□□□□□ -2.18
VPS26A-208ENST00000497022 A8MUU9 505 aa1.41□□□□□ -2.18
VPS26A-208ENST00000497022 A8MXQ7 604 aa1.41□□□□□ -2.18
VPS26A-208ENST00000497022 BOLA2-SMG1P6H3BVE0 249 aa1.41□□□□□ -2.18
VPS26A-208ENST00000497022 DNALI1O14645 258 aaPredicted RBP1.41□□□□□ -2.18
VPS26A-208ENST00000497022 RNF13O43567 381 aa1.41□□□□□ -2.18
VPS26A-208ENST00000497022 AGTP01019 485 aa1.41□□□□□ -2.18
VPS26A-208ENST00000497022 CST1P01037 141 aa1.41□□□□□ -2.18
VPS26A-208ENST00000497022 PABPC4LP0CB38 370 aaKnown RBP1.41□□□□□ -2.18
VPS26A-208ENST00000497022 TROVE2P10155 538 aaKnown RBP eCLIP1.41□□□□□ -2.18
VPS26A-208ENST00000497022 MCF2P10911 925 aa1.41□□□□□ -2.18
VPS26A-208ENST00000497022 CD1CP29017 333 aa1.41□□□□□ -2.18
VPS26A-208ENST00000497022 HNRNPH3P31942 346 aaKnown RBP1.41□□□□□ -2.18
VPS26A-208ENST00000497022 CASP14P31944 242 aa1.41□□□□□ -2.18
VPS26A-208ENST00000497022 OPRD1P41143 372 aa1.41□□□□□ -2.18
VPS26A-208ENST00000497022 CRYBB2P43320 205 aa1.41□□□□□ -2.18
VPS26A-208ENST00000497022 PLP1P60201 277 aa1.41□□□□□ -2.18
VPS26A-208ENST00000497022 GK3PQ14409 553 aa1.41□□□□□ -2.18
VPS26A-208ENST00000497022 PPP1R7Q15435 360 aa1.41□□□□□ -2.18
VPS26A-208ENST00000497022 DUSP7Q16829 419 aa1.41□□□□□ -2.18
VPS26A-208ENST00000497022 CARD17Q5XLA6 110 aa1.41□□□□□ -2.18
VPS26A-208ENST00000497022 LRRC66Q68CR7 880 aa1.41□□□□□ -2.18
VPS26A-208ENST00000497022 TMEM107Q6UX40 140 aa1.41□□□□□ -2.18
VPS26A-208ENST00000497022 NTM-AS1Q6ZSK4 140 aa1.41□□□□□ -2.18
VPS26A-208ENST00000497022 LINC00173Q6ZV60 143 aa1.41□□□□□ -2.18
VPS26A-208ENST00000497022 BIVMQ86UB2 503 aa1.41□□□□□ -2.18
VPS26A-208ENST00000497022 PSTKQ8IV42 348 aaKnown RBP1.41□□□□□ -2.18
VPS26A-208ENST00000497022 ZADH2Q8N4Q0 377 aa1.41□□□□□ -2.18
VPS26A-208ENST00000497022 CEP112Q8N8E3 955 aa1.41□□□□□ -2.18
VPS26A-208ENST00000497022 FNDC5Q8NAU1 212 aa1.41□□□□□ -2.18
VPS26A-208ENST00000497022 SPATA4Q8NEY3 305 aa1.41□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms