RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 PPIAP62937 165 aaKnown RBP2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 CDK6Q00534 326 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 NFATC4Q14934 902 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 EFNB3Q15768 340 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 MRPL23Q16540 153 aaKnown RBP2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 ITPRIPL2Q3MIP1 535 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 CBWD3Q5JTY5 395 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 MIIPQ5JXC2 388 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 SUSD4Q5VX71 490 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 B3GNTL1Q67FW5 361 aaPredicted RBP2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 ASPHD2Q6ICH7 369 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 ZNF770Q6IQ21 691 aaPredicted RBP2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 ADAM5Q6NVV9 412 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 FAM198BQ6UWH4 519 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 AHSA2Q719I0 299 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 MRGPREQ86SM8 312 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 LYG1Q8N1E2 194 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 SYS1Q8N2H4 156 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 OR4K2Q8NGD2 314 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 OR2AP1Q8NGE2 309 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 WDR20Q8TBZ3 569 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 TMEM163Q8TC26 289 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 XAGE5Q8WWM1 108 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 LCN9Q8WX39 176 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 GLYATL1Q969I3 302 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 SNRNP40Q96DI7 357 aaKnown RBP2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 SCMH1Q96GD3 660 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 CDKN2AIPNLQ96HQ2 116 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 REEP6Q96HR9 211 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 FCRL1Q96LA6 429 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 VSTM2LQ96N03 204 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 ZFP3Q96NJ6 502 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 TGM7Q96PF1 710 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 OR2A14Q96R47 310 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 SDHCQ99643 169 aaPredicted RBP2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 SPAG8Q99932 426 aaPredicted RBP2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 RIOK2Q9BVS4 552 aaKnown RBP2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 SLC29A3Q9BZD2 475 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 LHPPQ9H008 270 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 TLNRD1Q9H1K6 362 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 DSN1Q9H410 356 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 ZNF385DQ9H6B1 395 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 SLCO1B3Q9NPD5 702 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 C20orf141Q9NUB4 165 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 FBXL12Q9NXK8 326 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 GAR1Q9NY12 217 aaKnown RBP2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 ICAM5Q9UMF0 924 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 UBQLN1Q9UMX0 589 aaKnown RBP2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 C14orf166Q9Y224 244 aaKnown RBP2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 ZBTB32Q9Y2Y4 487 aaPredicted RBP2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 MEMO1Q9Y316 297 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 ATG4BQ9Y4P1 393 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 CEP170Q5SW79 1584 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 ITSN2Q9NZM3 1697 aa2.78□□□□□ -1.96
SNRNP48-202ENST00000496946 LRRC9Q6ZRR7 1453 aa2.78□□□□□ -1.96
SNRNP48-202ENST00000496946 A0A0G2JN53 185 aa2.78□□□□□ -1.96
SNRNP48-202ENST00000496946 A0A0U1RRA0 63 aa2.78□□□□□ -1.96
SNRNP48-202ENST00000496946 OR6C6A6NF89 314 aa2.78□□□□□ -1.96
SNRNP48-202ENST00000496946 E9PQ18 207 aa2.78□□□□□ -1.96
SNRNP48-202ENST00000496946 GPR31O00270 319 aa2.78□□□□□ -1.96
SNRNP48-202ENST00000496946 SLC16A5O15375 505 aa2.78□□□□□ -1.96
SNRNP48-202ENST00000496946 YY2O15391 372 aa2.78□□□□□ -1.96
SNRNP48-202ENST00000496946 CCL25O15444 150 aa2.78□□□□□ -1.96
SNRNP48-202ENST00000496946 TIMM8AO60220 97 aaPredicted RBP2.78□□□□□ -1.96
SNRNP48-202ENST00000496946 WDR1O75083 606 aa2.78□□□□□ -1.96
SNRNP48-202ENST00000496946 ICOSLGO75144 302 aa2.78□□□□□ -1.96
SNRNP48-202ENST00000496946 S1PR2O95136 353 aa2.78□□□□□ -1.96
SNRNP48-202ENST00000496946 CPNE6O95741 557 aa2.78□□□□□ -1.96
SNRNP48-202ENST00000496946 IL6RP08887 468 aaPredicted RBP2.78□□□□□ -1.96
SNRNP48-202ENST00000496946 IRF2P14316 349 aa2.78□□□□□ -1.96
SNRNP48-202ENST00000496946 HOXB2P14652 356 aa2.78□□□□□ -1.96
SNRNP48-202ENST00000496946 IVDP26440 423 aa2.78□□□□□ -1.96
SNRNP48-202ENST00000496946 CDX1P47902 265 aaPredicted RBP2.78□□□□□ -1.96
SNRNP48-202ENST00000496946 RARRES1P49788 294 aa2.78□□□□□ -1.96
SNRNP48-202ENST00000496946 AGTR2P50052 363 aa2.78□□□□□ -1.96
SNRNP48-202ENST00000496946 ASCL1P50553 236 aa2.78□□□□□ -1.96
SNRNP48-202ENST00000496946 ERVK11-1P61568 191 aa2.78□□□□□ -1.96
SNRNP48-202ENST00000496946 BTN3A2P78410 334 aa2.78□□□□□ -1.96
SNRNP48-202ENST00000496946 DCDP81605 110 aaKnown RBP2.78□□□□□ -1.96
SNRNP48-202ENST00000496946 MYL5Q02045 173 aa2.78□□□□□ -1.96
SNRNP48-202ENST00000496946 MXD1Q05195 221 aa2.78□□□□□ -1.96
SNRNP48-202ENST00000496946 OR5I1Q13606 314 aa2.78□□□□□ -1.96
SNRNP48-202ENST00000496946 SHHQ15465 462 aa2.78□□□□□ -1.96
SNRNP48-202ENST00000496946 TSNQ15631 228 aaKnown RBP2.78□□□□□ -1.96
SNRNP48-202ENST00000496946 ARHGAP11BQ3KRB8 267 aa2.78□□□□□ -1.96
SNRNP48-202ENST00000496946 ARL13AQ5H913 290 aaPredicted RBP2.78□□□□□ -1.96
SNRNP48-202ENST00000496946 TFDP3Q5H9I0 405 aa2.78□□□□□ -1.96
SNRNP48-202ENST00000496946 SAMD4BQ5PRF9 694 aaKnown RBP2.78□□□□□ -1.96
SNRNP48-202ENST00000496946 COL5A1-AS1Q5SY13 56 aa2.78□□□□□ -1.96
SNRNP48-202ENST00000496946 KIAA0895LQ68EN5 471 aa2.78□□□□□ -1.96
SNRNP48-202ENST00000496946 TMEM42Q69YG0 159 aa2.78□□□□□ -1.96
SNRNP48-202ENST00000496946 KDM4DQ6B0I6 523 aa2.78□□□□□ -1.96
SNRNP48-202ENST00000496946 FAM71E1Q6IPT2 247 aa2.78□□□□□ -1.96
SNRNP48-202ENST00000496946 CGB2Q6NT52 195 aa2.78□□□□□ -1.96
SNRNP48-202ENST00000496946 TEX38Q6PEX7 206 aa2.78□□□□□ -1.96
SNRNP48-202ENST00000496946 LCLAT1Q6UWP7 414 aa2.78□□□□□ -1.96
SNRNP48-202ENST00000496946 CTU1Q7Z7A3 348 aaKnown RBP2.78□□□□□ -1.96
SNRNP48-202ENST00000496946 RNF130Q86XS8 419 aa2.78□□□□□ -1.96
SNRNP48-202ENST00000496946 RIMKLAQ8IXN7 391 aa2.78□□□□□ -1.96
SNRNP48-202ENST00000496946 ZNF595Q8IYB9 648 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms