RNA–Protein interactions for RNA: ENST00000496723.1

CD46-218, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-218ENST00000496723 HIDE1A8MVS5 230 aa1.9□□□□□ -2.11
CD46-218ENST00000496723 H0Y8G0 127 aa1.9□□□□□ -2.11
CD46-218ENST00000496723 HAS3O00219 553 aa1.9□□□□□ -2.11
CD46-218ENST00000496723 CCL21O00585 134 aa1.9□□□□□ -2.11
CD46-218ENST00000496723 DYNC1I1O14576 645 aa1.9□□□□□ -2.11
CD46-218ENST00000496723 RRP8O43159 456 aaKnown RBP1.9□□□□□ -2.11
CD46-218ENST00000496723 NCF2P19878 526 aaPredicted RBP1.9□□□□□ -2.11
CD46-218ENST00000496723 YAP1P46937 504 aaKnown RBP1.9□□□□□ -2.11
CD46-218ENST00000496723 SULT1E1P49888 294 aa1.9□□□□□ -2.11
CD46-218ENST00000496723 RORCP51449 518 aa1.9□□□□□ -2.11
CD46-218ENST00000496723 UGT2B15P54855 530 aa1.9□□□□□ -2.11
CD46-218ENST00000496723 ATP5IP56385 69 aaPredicted RBP1.9□□□□□ -2.11
CD46-218ENST00000496723 SSX2Q16385 188 aa1.9□□□□□ -2.11
CD46-218ENST00000496723 PHYHD1Q5SRE7 291 aa1.9□□□□□ -2.11
CD46-218ENST00000496723 DNLZQ5SXM8 178 aa1.9□□□□□ -2.11
CD46-218ENST00000496723 DUX4L9Q6RFH8 374 aaPredicted RBP1.9□□□□□ -2.11
CD46-218ENST00000496723 KDM7AQ6ZMT4 941 aa1.9□□□□□ -2.11
CD46-218ENST00000496723 H2BFWTQ7Z2G1 175 aa1.9□□□□□ -2.11
CD46-218ENST00000496723 NANOGNBQ7Z5D8 188 aa1.9□□□□□ -2.11
CD46-218ENST00000496723 WDR86Q86TI4 376 aa1.9□□□□□ -2.11
CD46-218ENST00000496723 OR13C2Q8NGS9 318 aa1.9□□□□□ -2.11
CD46-218ENST00000496723 TM4SF18Q96CE8 201 aa1.9□□□□□ -2.11
CD46-218ENST00000496723 PANX2Q96RD6 677 aa1.9□□□□□ -2.11
CD46-218ENST00000496723 FMO2Q99518 471 aa1.9□□□□□ -2.11
CD46-218ENST00000496723 FOXC2Q99958 501 aa1.9□□□□□ -2.11
CD46-218ENST00000496723 SH3GL3Q99963 347 aa1.9□□□□□ -2.11
CD46-218ENST00000496723 KCTD14Q9BQ13 255 aaPredicted RBP1.9□□□□□ -2.11
CD46-218ENST00000496723 PKIBQ9C010 78 aa1.9□□□□□ -2.11
CD46-218ENST00000496723 ANKRD19PQ9H560 264 aa1.9□□□□□ -2.11
CD46-218ENST00000496723 HMG20AQ9NP66 347 aa1.9□□□□□ -2.11
CD46-218ENST00000496723 ISYNA1Q9NPH2 558 aa1.9□□□□□ -2.11
CD46-218ENST00000496723 SUN2Q9UH99 717 aa1.9□□□□□ -2.11
CD46-218ENST00000496723 SHPKQ9UHJ6 478 aa1.9□□□□□ -2.11
CD46-218ENST00000496723 ZNF639Q9UID6 485 aa1.9□□□□□ -2.11
CD46-218ENST00000496723 IKZF2Q9UKS7 526 aa1.9□□□□□ -2.11
CD46-218ENST00000496723 PSG8Q9UQ74 426 aa1.9□□□□□ -2.11
CD46-218ENST00000496723 PEX16Q9Y5Y5 336 aa1.9□□□□□ -2.11
CD46-218ENST00000496723 IKBKGQ9Y6K9 419 aa1.9□□□□□ -2.11
CD46-218ENST00000496723 COL27A1Q8IZC6 1860 aaPredicted RBP1.9□□□□□ -2.11
CD46-218ENST00000496723 FOXE1O00358 373 aaPredicted RBP1.89□□□□□ -2.11
CD46-218ENST00000496723 RAD51BO15315 384 aa1.89□□□□□ -2.11
CD46-218ENST00000496723 BCHEP06276 602 aa1.89□□□□□ -2.11
CD46-218ENST00000496723 C2P06681 752 aa1.89□□□□□ -2.11
CD46-218ENST00000496723 GNAO1P09471 354 aa1.89□□□□□ -2.11
CD46-218ENST00000496723 POLR2MP0CAP2 368 aa1.89□□□□□ -2.11
CD46-218ENST00000496723 MCF2P10911 925 aa1.89□□□□□ -2.11
CD46-218ENST00000496723 SLC2A3P11169 496 aa1.89□□□□□ -2.11
CD46-218ENST00000496723 ATP1B2P14415 290 aaPredicted RBP1.89□□□□□ -2.11
CD46-218ENST00000496723 IFNA8P32881 189 aa1.89□□□□□ -2.11
CD46-218ENST00000496723 VHLP40337 213 aa1.89□□□□□ -2.11
CD46-218ENST00000496723 CDKN2BP42772 138 aa1.89□□□□□ -2.11
CD46-218ENST00000496723 RFX3P48380 749 aa1.89□□□□□ -2.11
CD46-218ENST00000496723 CSNK1A1P48729 337 aa1.89□□□□□ -2.11
CD46-218ENST00000496723 ZNF92Q03936 586 aa1.89□□□□□ -2.11
CD46-218ENST00000496723 DDX39BQ13838 428 aaKnown RBP1.89□□□□□ -2.11
CD46-218ENST00000496723 ZNF77Q15935 545 aa1.89□□□□□ -2.11
CD46-218ENST00000496723 CTSL3PQ5NE16 218 aa1.89□□□□□ -2.11
CD46-218ENST00000496723 NTM-AS1Q6ZSK4 140 aa1.89□□□□□ -2.11
CD46-218ENST00000496723 LHFPL3Q86UP9 236 aa1.89□□□□□ -2.11
CD46-218ENST00000496723 LGI3Q8N145 548 aa1.89□□□□□ -2.11
CD46-218ENST00000496723 OR8J1Q8NGP2 316 aa1.89□□□□□ -2.11
CD46-218ENST00000496723 OR4S2Q8NH73 311 aa1.89□□□□□ -2.11
CD46-218ENST00000496723 SHC3Q92529 594 aa1.89□□□□□ -2.11
CD46-218ENST00000496723 TMEM54Q969K7 222 aa1.89□□□□□ -2.11
CD46-218ENST00000496723 PLEKHA8Q96JA3 519 aa1.89□□□□□ -2.11
CD46-218ENST00000496723 TMEM59Q9BXS4 323 aa1.89□□□□□ -2.11
CD46-218ENST00000496723 ROPN1BQ9BZX4 212 aaPredicted RBP1.89□□□□□ -2.11
CD46-218ENST00000496723 RPF2Q9H7B2 306 aaKnown RBP1.89□□□□□ -2.11
CD46-218ENST00000496723 NT5MQ9NPB1 228 aa1.89□□□□□ -2.11
CD46-218ENST00000496723 HPCAL4Q9UM19 191 aa1.89□□□□□ -2.11
CD46-218ENST00000496723 MRPS18BQ9Y676 258 aaKnown RBP1.89□□□□□ -2.11
CD46-218ENST00000496723 TRAV39A0A0B4J263 110 aa1.88□□□□□ -2.11
CD46-218ENST00000496723 TMEM223A0PJW6 202 aa1.88□□□□□ -2.11
CD46-218ENST00000496723 ARHGEF35A5YM69 484 aa1.88□□□□□ -2.11
CD46-218ENST00000496723 SGK1O00141 431 aa1.88□□□□□ -2.11
CD46-218ENST00000496723 SOX15O60248 233 aa1.88□□□□□ -2.11
CD46-218ENST00000496723 PALMO75781 387 aa1.88□□□□□ -2.11
CD46-218ENST00000496723 EIF3GO75821 320 aaKnown RBP eCLIP1.88□□□□□ -2.11
CD46-218ENST00000496723 UTS2O95399 124 aa1.88□□□□□ -2.11
CD46-218ENST00000496723 NDUFB10O96000 172 aa1.88□□□□□ -2.11
CD46-218ENST00000496723 SERPINA3P01011 423 aa1.88□□□□□ -2.11
CD46-218ENST00000496723 RNASE2P10153 161 aaKnown RBP1.88□□□□□ -2.11
CD46-218ENST00000496723 ETS2P15036 469 aa1.88□□□□□ -2.11
CD46-218ENST00000496723 CASP14P31944 242 aa1.88□□□□□ -2.11
CD46-218ENST00000496723 HRH1P35367 487 aa1.88□□□□□ -2.11
CD46-218ENST00000496723 SERPINB5P36952 375 aa1.88□□□□□ -2.11
CD46-218ENST00000496723 CRYBB2P43320 205 aa1.88□□□□□ -2.11
CD46-218ENST00000496723 CDKN1BP46527 198 aa1.88□□□□□ -2.11
CD46-218ENST00000496723 CX3CR1P49238 355 aa1.88□□□□□ -2.11
CD46-218ENST00000496723 ACTR3P61158 418 aa1.88□□□□□ -2.11
CD46-218ENST00000496723 ARG2P78540 354 aa1.88□□□□□ -2.11
CD46-218ENST00000496723 MAJINQ3KP22 176 aa1.88□□□□□ -2.11
CD46-218ENST00000496723 FAM78AQ5JUQ0 283 aa1.88□□□□□ -2.11
CD46-218ENST00000496723 PRAMEF5Q5TYX0 476 aa1.88□□□□□ -2.11
CD46-218ENST00000496723 PRAMEF6Q5VXH4 476 aa1.88□□□□□ -2.11
CD46-218ENST00000496723 TMEM135Q86UB9 458 aa1.88□□□□□ -2.11
CD46-218ENST00000496723 EGFL6Q8IUX8 553 aa1.88□□□□□ -2.11
CD46-218ENST00000496723 MMAAQ8IVH4 418 aaKnown RBP1.88□□□□□ -2.11
CD46-218ENST00000496723 OR1L6Q8NGR2 347 aa1.88□□□□□ -2.11
CD46-218ENST00000496723 FBXO32Q969P5 355 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms