RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 PIAS4Q8N2W9 510 aaPredicted RBP16.93■□□□□ 0.3
HDAC4-212ENST00000495497 KBTBD8Q8NFY9 601 aa16.93■□□□□ 0.3
HDAC4-212ENST00000495497 LILRB1Q8NHL6 650 aaPredicted RBP16.93■□□□□ 0.3
HDAC4-212ENST00000495497 TMEM204Q9BSN7 226 aa16.93■□□□□ 0.3
HDAC4-212ENST00000495497 S100A14Q9HCY8 104 aa16.93■□□□□ 0.3
HDAC4-212ENST00000495497 SRA1Q9HD15 236 aaKnown RBP16.93■□□□□ 0.3
HDAC4-212ENST00000495497 OAZ3Q9UMX2 235 aa16.93■□□□□ 0.3
HDAC4-212ENST00000495497 RNF115Q9Y4L5 304 aa16.93■□□□□ 0.3
HDAC4-212ENST00000495497 OR6C68A6NDL8 312 aa16.92■□□□□ 0.3
HDAC4-212ENST00000495497 DCTN6O00399 190 aa16.92■□□□□ 0.3
HDAC4-212ENST00000495497 AHCYL1O43865 530 aa16.92■□□□□ 0.3
HDAC4-212ENST00000495497 FARS2O95363 451 aaKnown RBP16.92■□□□□ 0.3
HDAC4-212ENST00000495497 GPANK1O95872 356 aa16.92■□□□□ 0.3
HDAC4-212ENST00000495497 OSMP13725 252 aa16.92■□□□□ 0.3
HDAC4-212ENST00000495497 CBR1P16152 277 aa16.92■□□□□ 0.3
HDAC4-212ENST00000495497 GIPRP48546 466 aa16.92■□□□□ 0.3
HDAC4-212ENST00000495497 PTDSS1P48651 473 aaKnown RBP16.92■□□□□ 0.3
HDAC4-212ENST00000495497 IDH3GP51553 393 aaPredicted RBP16.92■□□□□ 0.3
HDAC4-212ENST00000495497 RAB1AP62820 205 aa16.92■□□□□ 0.3
HDAC4-212ENST00000495497 MRPS34P82930 218 aaKnown RBP16.92■□□□□ 0.3
HDAC4-212ENST00000495497 NPRL3Q12980 569 aa16.92■□□□□ 0.3
HDAC4-212ENST00000495497 ZNF362Q5T0B9 420 aaPredicted RBP16.92■□□□□ 0.3
HDAC4-212ENST00000495497 SLC16A14Q7RTX9 510 aa16.92■□□□□ 0.3
HDAC4-212ENST00000495497 ZDHHC13Q8IUH4 622 aa16.92■□□□□ 0.3
HDAC4-212ENST00000495497 LNX2Q8N448 690 aa16.92■□□□□ 0.3
HDAC4-212ENST00000495497 CYB561A3Q8NBI2 242 aa16.92■□□□□ 0.3
HDAC4-212ENST00000495497 OR2T33Q8NG76 320 aa16.92■□□□□ 0.3
HDAC4-212ENST00000495497 TEX47Q8TBZ9 253 aa16.92■□□□□ 0.3
HDAC4-212ENST00000495497 SLC38A2Q96QD8 506 aa16.92■□□□□ 0.3
HDAC4-212ENST00000495497 UBTD1Q9HAC8 227 aa16.92■□□□□ 0.3
HDAC4-212ENST00000495497 SIAEQ9HAT2 523 aa16.92■□□□□ 0.3
HDAC4-212ENST00000495497 RPRD1BQ9NQG5 326 aaKnown RBP16.92■□□□□ 0.3
HDAC4-212ENST00000495497 CRNNQ9UBG3 495 aaPredicted RBP16.92■□□□□ 0.3
HDAC4-212ENST00000495497 COA3Q9Y2R0 106 aaPredicted RBP16.92■□□□□ 0.3
HDAC4-212ENST00000495497 KHDRBS3O75525 346 aaKnown RBP16.91■□□□□ 0.3
HDAC4-212ENST00000495497 RENP00797 406 aa16.91■□□□□ 0.3
HDAC4-212ENST00000495497 CECR9P0C854 216 aa16.91■□□□□ 0.3
HDAC4-212ENST00000495497 PTAFRP25105 342 aa16.91■□□□□ 0.3
HDAC4-212ENST00000495497 LAP3P28838 519 aa16.91■□□□□ 0.3
HDAC4-212ENST00000495497 GINS1Q14691 196 aa16.91■□□□□ 0.3
HDAC4-212ENST00000495497 GSG1Q2KHT4 349 aa16.91■□□□□ 0.3
HDAC4-212ENST00000495497 PGGHGQ32M88 737 aa16.91■□□□□ 0.3
HDAC4-212ENST00000495497 ACSM5Q6NUN0 579 aa16.91■□□□□ 0.3
HDAC4-212ENST00000495497 UGT2A3Q6UWM9 527 aa16.91■□□□□ 0.3
HDAC4-212ENST00000495497 FOXL2NBQ6ZUU3 175 aa16.91■□□□□ 0.3
HDAC4-212ENST00000495497 CCDC36Q8IYA8 594 aa16.91■□□□□ 0.3
HDAC4-212ENST00000495497 C10orf67Q8IYJ2 551 aa16.91■□□□□ 0.3
HDAC4-212ENST00000495497 SVOPLQ8N434 492 aa16.91■□□□□ 0.3
HDAC4-212ENST00000495497 SLC37A3Q8NCC5 494 aa16.91■□□□□ 0.3
HDAC4-212ENST00000495497 NPEPL1Q8NDH3 523 aa16.91■□□□□ 0.3
HDAC4-212ENST00000495497 NANOS1Q8WY41 292 aaKnown RBP16.91■□□□□ 0.3
HDAC4-212ENST00000495497 MS4A3Q96HJ5 214 aa16.91■□□□□ 0.3
HDAC4-212ENST00000495497 ZNF75AQ96N20 296 aa16.91■□□□□ 0.3
HDAC4-212ENST00000495497 DDOQ99489 341 aa16.91■□□□□ 0.3
HDAC4-212ENST00000495497 GABARAPL1Q9H0R8 117 aa16.91■□□□□ 0.3
HDAC4-212ENST00000495497 RNF121Q9H920 327 aa16.91■□□□□ 0.3
HDAC4-212ENST00000495497 EMC7Q9NPA0 242 aa16.91■□□□□ 0.3
HDAC4-212ENST00000495497 PAPOLBQ9NRJ5 636 aaKnown RBP16.91■□□□□ 0.3
HDAC4-212ENST00000495497 B9D1Q9UPM9 204 aa16.91■□□□□ 0.3
HDAC4-212ENST00000495497 HRNRQ86YZ3 2850 aaPredicted RBP16.91■□□□□ 0.3
HDAC4-212ENST00000495497 FAM171A2A8MVW0 826 aa16.9■□□□□ 0.3
HDAC4-212ENST00000495497 SHISA9B4DS77 424 aa16.9■□□□□ 0.3
HDAC4-212ENST00000495497 UBL3O95164 117 aa16.9■□□□□ 0.3
HDAC4-212ENST00000495497 MPZL1O95297 269 aa16.9■□□□□ 0.3
HDAC4-212ENST00000495497 IGKV3-15P01624 115 aa16.9■□□□□ 0.3
HDAC4-212ENST00000495497 IGLV1-44P01699 117 aa16.9■□□□□ 0.3
HDAC4-212ENST00000495497 NPR2P20594 1047 aa16.9■□□□□ 0.3
HDAC4-212ENST00000495497 ARR3P36575 388 aa16.9■□□□□ 0.3
HDAC4-212ENST00000495497 CENPAP49450 140 aa16.9■□□□□ 0.3
HDAC4-212ENST00000495497 RAB39AQ14964 217 aa16.9■□□□□ 0.3
HDAC4-212ENST00000495497 C1QTNF12Q5T7M4 302 aa16.9■□□□□ 0.3
HDAC4-212ENST00000495497 TMEM236Q5W0B7 351 aa16.9■□□□□ 0.3
HDAC4-212ENST00000495497 OR6V1Q8N148 313 aa16.9■□□□□ 0.3
HDAC4-212ENST00000495497 AKAP1Q92667 903 aaKnown RBP eCLIP16.9■□□□□ 0.3
HDAC4-212ENST00000495497 RADILQ96JH8 1075 aa16.9■□□□□ 0.3
HDAC4-212ENST00000495497 POLE4Q9NR33 117 aa16.9■□□□□ 0.3
HDAC4-212ENST00000495497 KRT84Q9NSB2 600 aa16.9■□□□□ 0.3
HDAC4-212ENST00000495497 BAIAP2Q9UQB8 552 aa16.9■□□□□ 0.3
HDAC4-212ENST00000495497 CSMD1Q96PZ7 3565 aa16.9■□□□□ 0.3
HDAC4-212ENST00000495497 APCP25054 2843 aa16.89■□□□□ 0.29
HDAC4-212ENST00000495497 IGLV1-36A0A0B4J1U3 117 aa16.89■□□□□ 0.29
HDAC4-212ENST00000495497 RAB36O95755 333 aa16.89■□□□□ 0.29
HDAC4-212ENST00000495497 CALCRP30988 508 aa16.89■□□□□ 0.29
HDAC4-212ENST00000495497 NRN1LQ496H8 165 aa16.89■□□□□ 0.29
HDAC4-212ENST00000495497 FAM27BQ5VT28 67 aa16.89■□□□□ 0.29
HDAC4-212ENST00000495497 KDM4DQ6B0I6 523 aa16.89■□□□□ 0.29
HDAC4-212ENST00000495497 SLC22A25Q6T423 547 aa16.89■□□□□ 0.29
HDAC4-212ENST00000495497 ZNRF4Q8WWF5 429 aa16.89■□□□□ 0.29
HDAC4-212ENST00000495497 FBXO17Q96EF6 278 aa16.89■□□□□ 0.29
HDAC4-212ENST00000495497 SNX18Q96RF0 628 aa16.89■□□□□ 0.29
HDAC4-212ENST00000495497 MOKQ9UQ07 419 aa16.89■□□□□ 0.29
HDAC4-212ENST00000495497 ABCA12Q86UK0 2595 aa16.88■□□□□ 0.29
HDAC4-212ENST00000495497 ABCA4P78363 2273 aa16.88■□□□□ 0.29
HDAC4-212ENST00000495497 ATP6V1G2-DDX39BF2Z307 99 aa16.88■□□□□ 0.29
HDAC4-212ENST00000495497 MMP7P09237 267 aaPredicted RBP16.88■□□□□ 0.29
HDAC4-212ENST00000495497 ZNF14P17017 642 aaPredicted RBP16.88■□□□□ 0.29
HDAC4-212ENST00000495497 ZNF32P17041 273 aa16.88■□□□□ 0.29
HDAC4-212ENST00000495497 MSR1P21757 451 aa16.88■□□□□ 0.29
HDAC4-212ENST00000495497 CRABP1P29762 137 aa16.88■□□□□ 0.29
HDAC4-212ENST00000495497 GRK5P34947 590 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms