RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 SMURF2Q9HAU4 748 aa19.81■□□□□ 0.76
COL27A1-208ENST00000494780 DECR2Q9NUI1 292 aa19.81■□□□□ 0.76
COL27A1-208ENST00000494780 BAG5Q9UL15 447 aa19.81■□□□□ 0.76
COL27A1-208ENST00000494780 NPIPB13A6NJU9 1138 aa19.8■□□□□ 0.76
COL27A1-208ENST00000494780 NPIPB4C9JG80 1138 aa19.8■□□□□ 0.76
COL27A1-208ENST00000494780 OR5F1O95221 314 aa19.8■□□□□ 0.76
COL27A1-208ENST00000494780 IGHV3-13P01766 116 aa19.8■□□□□ 0.76
COL27A1-208ENST00000494780 TSPAN19P0C672 248 aa19.8■□□□□ 0.76
COL27A1-208ENST00000494780 TAS2R41P59536 307 aa19.8■□□□□ 0.76
COL27A1-208ENST00000494780 MVKQ03426 396 aa19.8■□□□□ 0.76
COL27A1-208ENST00000494780 CYLC2Q14093 348 aaPredicted RBP19.8■□□□□ 0.76
COL27A1-208ENST00000494780 PABPC1L2AQ5JQF8 200 aa19.8■□□□□ 0.76
COL27A1-208ENST00000494780 ARMC4Q5T2S8 1044 aa19.8■□□□□ 0.76
COL27A1-208ENST00000494780 AVPI1Q5T686 147 aa19.8■□□□□ 0.76
COL27A1-208ENST00000494780 NANOGP8Q6NSW7 305 aa19.8■□□□□ 0.76
COL27A1-208ENST00000494780 OR1J1Q8NGS3 322 aa19.8■□□□□ 0.76
COL27A1-208ENST00000494780 TMEM255BQ8WV15 326 aa19.8■□□□□ 0.76
COL27A1-208ENST00000494780 RAB39BQ96DA2 213 aa19.8■□□□□ 0.76
COL27A1-208ENST00000494780 SH3GL1Q99961 368 aa19.8■□□□□ 0.76
COL27A1-208ENST00000494780 CCNB1IP1Q9NPC3 277 aa19.8■□□□□ 0.76
COL27A1-208ENST00000494780 G6PC2Q9NQR9 355 aa19.8■□□□□ 0.76
COL27A1-208ENST00000494780 TPD52L2O43399 206 aaKnown RBP19.79■□□□□ 0.76
COL27A1-208ENST00000494780 METTL21CQ5VZV1 264 aa19.79■□□□□ 0.76
COL27A1-208ENST00000494780 USP51Q70EK9 711 aa19.79■□□□□ 0.76
COL27A1-208ENST00000494780 CPEB3Q8NE35 698 aaKnown RBP19.79■□□□□ 0.76
COL27A1-208ENST00000494780 TMEM239Q8WW34 195 aa19.79■□□□□ 0.76
COL27A1-208ENST00000494780 SAP30LQ9HAJ7 183 aa19.79■□□□□ 0.76
COL27A1-208ENST00000494780 NPHS2Q9NP85 383 aa19.79■□□□□ 0.76
COL27A1-208ENST00000494780 C20orf141Q9NUB4 165 aa19.79■□□□□ 0.76
COL27A1-208ENST00000494780 RIMS3Q9UJD0 308 aa19.79■□□□□ 0.76
COL27A1-208ENST00000494780 UGT2A1Q9Y4X1 527 aa19.79■□□□□ 0.76
COL27A1-208ENST00000494780 CLDN25C9JDP6 229 aa19.78■□□□□ 0.76
COL27A1-208ENST00000494780 FBP2O00757 339 aa19.78■□□□□ 0.76
COL27A1-208ENST00000494780 DEAF1O75398 565 aaPredicted RBP19.78■□□□□ 0.76
COL27A1-208ENST00000494780 MPZL1O95297 269 aa19.78■□□□□ 0.76
COL27A1-208ENST00000494780 SLC2A10O95528 541 aa19.78■□□□□ 0.76
COL27A1-208ENST00000494780 THRBP10828 461 aa19.78■□□□□ 0.76
COL27A1-208ENST00000494780 NR2C1P13056 603 aa19.78■□□□□ 0.76
COL27A1-208ENST00000494780 CCNOP22674 350 aa19.78■□□□□ 0.76
COL27A1-208ENST00000494780 STOMP27105 288 aa19.78■□□□□ 0.76
COL27A1-208ENST00000494780 ZNF81P51508 661 aa19.78■□□□□ 0.76
COL27A1-208ENST00000494780 HFEQ30201 348 aa19.78■□□□□ 0.76
COL27A1-208ENST00000494780 UNQ6126/PRO20091Q6UXV3 157 aa19.78■□□□□ 0.76
COL27A1-208ENST00000494780 THSD4Q6ZMP0 1018 aa19.78■□□□□ 0.76
COL27A1-208ENST00000494780 USP43Q70EL4 1123 aa19.78■□□□□ 0.76
COL27A1-208ENST00000494780 CALHM3Q86XJ0 350 aa19.78■□□□□ 0.76
COL27A1-208ENST00000494780 MOSPD2Q8NHP6 518 aa19.78■□□□□ 0.76
COL27A1-208ENST00000494780 GTF3AQ92664 365 aaKnown RBP19.78■□□□□ 0.76
COL27A1-208ENST00000494780 NABP1Q96AH0 204 aa19.78■□□□□ 0.76
COL27A1-208ENST00000494780 NMD3Q96D46 503 aaKnown RBP19.78■□□□□ 0.76
COL27A1-208ENST00000494780 POM121L2Q96KW2 1035 aa19.78■□□□□ 0.76
COL27A1-208ENST00000494780 EIF3KQ9UBQ5 218 aaKnown RBP19.78■□□□□ 0.76
COL27A1-208ENST00000494780 WIPI2Q9Y4P8 454 aa19.78■□□□□ 0.76
COL27A1-208ENST00000494780 GMNCA6NCL1 334 aa19.77■□□□□ 0.76
COL27A1-208ENST00000494780 HMGB1P1B2RPK0 211 aaPredicted RBP19.77■□□□□ 0.76
COL27A1-208ENST00000494780 PLPP2O43688 288 aa19.77■□□□□ 0.76
COL27A1-208ENST00000494780 EDF1O60869 148 aaKnown RBP19.77■□□□□ 0.76
COL27A1-208ENST00000494780 ZNF32P17041 273 aa19.77■□□□□ 0.76
COL27A1-208ENST00000494780 TNFRSF1BP20333 461 aa19.77■□□□□ 0.76
COL27A1-208ENST00000494780 EPHA1P21709 976 aa19.77■□□□□ 0.76
COL27A1-208ENST00000494780 CFPP27918 469 aa19.77■□□□□ 0.76
COL27A1-208ENST00000494780 GCH1P30793 250 aa19.77■□□□□ 0.76
COL27A1-208ENST00000494780 CDAP32320 146 aa19.77■□□□□ 0.76
COL27A1-208ENST00000494780 GLO1Q04760 184 aa19.77■□□□□ 0.76
COL27A1-208ENST00000494780 PIN1Q13526 163 aaPredicted RBP19.77■□□□□ 0.76
COL27A1-208ENST00000494780 TSTQ16762 297 aaKnown RBP19.77■□□□□ 0.76
COL27A1-208ENST00000494780 ZNF718Q3SXZ3 478 aa19.77■□□□□ 0.76
COL27A1-208ENST00000494780 RABL3Q5HYI8 236 aa19.77■□□□□ 0.76
COL27A1-208ENST00000494780 FAM209AQ5JX71 171 aa19.77■□□□□ 0.76
COL27A1-208ENST00000494780 C1orf229Q6ZS94 237 aaPredicted RBP19.77■□□□□ 0.76
COL27A1-208ENST00000494780 OR8J3Q8NGG0 315 aa19.77■□□□□ 0.76
COL27A1-208ENST00000494780 HDAC2Q92769 488 aaKnown RBP19.77■□□□□ 0.76
COL27A1-208ENST00000494780 RAB1CQ92928 201 aa19.77■□□□□ 0.76
COL27A1-208ENST00000494780 ELMOD3Q96FG2 381 aa19.77■□□□□ 0.76
COL27A1-208ENST00000494780 TIMD4Q96H15 378 aa19.77■□□□□ 0.76
COL27A1-208ENST00000494780 ECSITQ9BQ95 431 aa19.77■□□□□ 0.76
COL27A1-208ENST00000494780 TXNIPQ9H3M7 391 aa19.77■□□□□ 0.76
COL27A1-208ENST00000494780 PCDHB10Q9UN67 800 aa19.77■□□□□ 0.76
COL27A1-208ENST00000494780 MED31Q9Y3C7 131 aa19.77■□□□□ 0.76
COL27A1-208ENST00000494780 A0A0G2JMP0 313 aa19.76■□□□□ 0.75
COL27A1-208ENST00000494780 A0A0G2JND7 137 aa19.76■□□□□ 0.75
COL27A1-208ENST00000494780 A0A0X1KG70 313 aa19.76■□□□□ 0.75
COL27A1-208ENST00000494780 IGHV2-5P01817 119 aa19.76■□□□□ 0.75
COL27A1-208ENST00000494780 HILS1P60008 231 aa19.76■□□□□ 0.75
COL27A1-208ENST00000494780 TAF11Q15544 211 aa19.76■□□□□ 0.75
COL27A1-208ENST00000494780 SGCAQ16586 387 aa19.76■□□□□ 0.75
COL27A1-208ENST00000494780 FAM27BQ5VT28 67 aa19.76■□□□□ 0.75
COL27A1-208ENST00000494780 ERICH5Q6P6B1 374 aa19.76■□□□□ 0.75
COL27A1-208ENST00000494780 C1orf174Q8IYL3 243 aa19.76■□□□□ 0.75
COL27A1-208ENST00000494780 ZNF101Q8IZC7 436 aa19.76■□□□□ 0.75
COL27A1-208ENST00000494780 OR4M2Q8NGB6 313 aa19.76■□□□□ 0.75
COL27A1-208ENST00000494780 MARS2Q96GW9 593 aaKnown RBP19.76■□□□□ 0.75
COL27A1-208ENST00000494780 LOC105371242A0A075B767 164 aa19.75■□□□□ 0.75
COL27A1-208ENST00000494780 IGKV1D-43A0A0B4J1Z2 117 aa19.75■□□□□ 0.75
COL27A1-208ENST00000494780 C5orf49A4QMS7 147 aa19.75■□□□□ 0.75
COL27A1-208ENST00000494780 J3QLI3 93 aa19.75■□□□□ 0.75
COL27A1-208ENST00000494780 SHOX2O60902 331 aaPredicted RBP19.75■□□□□ 0.75
COL27A1-208ENST00000494780 AVPP01185 164 aa19.75■□□□□ 0.75
COL27A1-208ENST00000494780 IFNA14P01570 189 aa19.75■□□□□ 0.75
COL27A1-208ENST00000494780 WNT5AP41221 380 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms