RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 TRAV27A0A087WT01 109 aa8.23□□□□□ -1.09
MSH5-218ENST00000494646 IQCMA0A1B0GVH7 501 aa8.23□□□□□ -1.09
MSH5-218ENST00000494646 A0A1W2PPW3 197 aa8.23□□□□□ -1.09
MSH5-218ENST00000494646 M0R233 179 aa8.23□□□□□ -1.09
MSH5-218ENST00000494646 NME4O00746 187 aa8.23□□□□□ -1.09
MSH5-218ENST00000494646 FFAR1O14842 300 aa8.23□□□□□ -1.09
MSH5-218ENST00000494646 MMP7P09237 267 aaPredicted RBP8.23□□□□□ -1.09
MSH5-218ENST00000494646 TSPAN19P0C672 248 aa8.23□□□□□ -1.09
MSH5-218ENST00000494646 SAGP10523 405 aaPredicted RBP8.23□□□□□ -1.09
MSH5-218ENST00000494646 NCK1P16333 377 aa8.23□□□□□ -1.09
MSH5-218ENST00000494646 ZNF32P17041 273 aa8.23□□□□□ -1.09
MSH5-218ENST00000494646 GIFP27352 417 aa8.23□□□□□ -1.09
MSH5-218ENST00000494646 MAGEB1P43366 347 aa8.23□□□□□ -1.09
MSH5-218ENST00000494646 DAP3P51398 398 aaKnown RBP8.23□□□□□ -1.09
MSH5-218ENST00000494646 SLC7A2P52569 658 aa8.23□□□□□ -1.09
MSH5-218ENST00000494646 CHN2P52757 468 aa8.23□□□□□ -1.09
MSH5-218ENST00000494646 UCP2P55851 309 aa8.23□□□□□ -1.09
MSH5-218ENST00000494646 HSF2Q03933 536 aa8.23□□□□□ -1.09
MSH5-218ENST00000494646 CD47Q08722 323 aa8.23□□□□□ -1.09
MSH5-218ENST00000494646 RIN1Q13671 783 aa8.23□□□□□ -1.09
MSH5-218ENST00000494646 CCNIQ14094 377 aa8.23□□□□□ -1.09
MSH5-218ENST00000494646 TRAM2Q15035 370 aa8.23□□□□□ -1.09
MSH5-218ENST00000494646 PABPC1L2AQ5JQF8 200 aa8.23□□□□□ -1.09
MSH5-218ENST00000494646 ELFN2Q5R3F8 820 aa8.23□□□□□ -1.09
MSH5-218ENST00000494646 SLC25A47Q6Q0C1 308 aa8.23□□□□□ -1.09
MSH5-218ENST00000494646 FKBP9P1Q75LS8 142 aa8.23□□□□□ -1.09
MSH5-218ENST00000494646 NRMQ8IXM6 262 aa8.23□□□□□ -1.09
MSH5-218ENST00000494646 RBM15BQ8NDT2 890 aaKnown RBP8.23□□□□□ -1.09
MSH5-218ENST00000494646 NOXO1Q8NFA2 376 aa8.23□□□□□ -1.09
MSH5-218ENST00000494646 SYNPRQ8TBG9 265 aa8.23□□□□□ -1.09
MSH5-218ENST00000494646 LIPHQ8WWY8 451 aa8.23□□□□□ -1.09
MSH5-218ENST00000494646 YIPF5Q969M3 257 aa8.23□□□□□ -1.09
MSH5-218ENST00000494646 PRRC1Q96M27 445 aa8.23□□□□□ -1.09
MSH5-218ENST00000494646 RBP7Q96R05 134 aa8.23□□□□□ -1.09
MSH5-218ENST00000494646 HOPXQ9BPY8 73 aaPredicted RBP8.23□□□□□ -1.09
MSH5-218ENST00000494646 ELAC2Q9BQ52 826 aaKnown RBP8.23□□□□□ -1.09
MSH5-218ENST00000494646 FNDC11Q9BVV2 318 aa8.23□□□□□ -1.09
MSH5-218ENST00000494646 NARFLQ9H6Q4 476 aa8.23□□□□□ -1.09
MSH5-218ENST00000494646 EFCAB1Q9HAE3 211 aa8.23□□□□□ -1.09
MSH5-218ENST00000494646 SIAEQ9HAT2 523 aa8.23□□□□□ -1.09
MSH5-218ENST00000494646 CCNB1IP1Q9NPC3 277 aa8.23□□□□□ -1.09
MSH5-218ENST00000494646 TMEM160Q9NX00 188 aa8.23□□□□□ -1.09
MSH5-218ENST00000494646 UGT2A1Q9Y4X1 527 aa8.23□□□□□ -1.09
MSH5-218ENST00000494646 ARHGAP32A7KAX9 2087 aa8.22□□□□□ -1.09
MSH5-218ENST00000494646 A0A087WUU8 490 aa8.22□□□□□ -1.09
MSH5-218ENST00000494646 CENPBD1B2RD01 187 aa8.22□□□□□ -1.09
MSH5-218ENST00000494646 SLC22A2O15244 555 aa8.22□□□□□ -1.09
MSH5-218ENST00000494646 PHF1O43189 567 aaPredicted RBP8.22□□□□□ -1.09
MSH5-218ENST00000494646 MGRN1O60291 552 aa8.22□□□□□ -1.09
MSH5-218ENST00000494646 CDC14BO60729 498 aa8.22□□□□□ -1.09
MSH5-218ENST00000494646 CCDC22O60826 627 aa8.22□□□□□ -1.09
MSH5-218ENST00000494646 ENTPD5O75356 428 aa8.22□□□□□ -1.09
MSH5-218ENST00000494646 SERPINA1P01009 418 aa8.22□□□□□ -1.09
MSH5-218ENST00000494646 PTHP01270 115 aa8.22□□□□□ -1.09
MSH5-218ENST00000494646 IGF2P01344 180 aa8.22□□□□□ -1.09
MSH5-218ENST00000494646 IFNW1P05000 195 aa8.22□□□□□ -1.09
MSH5-218ENST00000494646 TACSTD2P09758 323 aa8.22□□□□□ -1.09
MSH5-218ENST00000494646 APLNRP35414 380 aa8.22□□□□□ -1.09
MSH5-218ENST00000494646 RAD52P43351 418 aa8.22□□□□□ -1.09
MSH5-218ENST00000494646 GSK3BP49841 420 aa8.22□□□□□ -1.09
MSH5-218ENST00000494646 RPL27P61353 136 aaKnown RBP8.22□□□□□ -1.09
MSH5-218ENST00000494646 RPS23P62266 143 aaKnown RBP8.22□□□□□ -1.09
MSH5-218ENST00000494646 ERVK-25P63136 954 aa8.22□□□□□ -1.09
MSH5-218ENST00000494646 PRKCDQ05655 676 aa8.22□□□□□ -1.09
MSH5-218ENST00000494646 NKPD1Q17RQ9 610 aa8.22□□□□□ -1.09
MSH5-218ENST00000494646 TBC1D28Q2M2D7 210 aa8.22□□□□□ -1.09
MSH5-218ENST00000494646 C10orf128Q5T292 105 aa8.22□□□□□ -1.09
MSH5-218ENST00000494646 CBLL1Q75N03 491 aa8.22□□□□□ -1.09
MSH5-218ENST00000494646 OAFQ86UD1 273 aa8.22□□□□□ -1.09
MSH5-218ENST00000494646 PHC2Q8IXK0 858 aa8.22□□□□□ -1.09
MSH5-218ENST00000494646 LRRC75AQ8NAA5 344 aa8.22□□□□□ -1.09
MSH5-218ENST00000494646 OR1J2Q8NGS2 313 aa8.22□□□□□ -1.09
MSH5-218ENST00000494646 OR1J1Q8NGS3 322 aa8.22□□□□□ -1.09
MSH5-218ENST00000494646 AKR7LQ8NHP1 331 aa8.22□□□□□ -1.09
MSH5-218ENST00000494646 SPATA3Q8NHX4 192 aa8.22□□□□□ -1.09
MSH5-218ENST00000494646 C11orf40Q8WZ69 217 aa8.22□□□□□ -1.09
MSH5-218ENST00000494646 RDH5Q92781 318 aa8.22□□□□□ -1.09
MSH5-218ENST00000494646 FAM162AQ96A26 154 aa8.22□□□□□ -1.09
MSH5-218ENST00000494646 NABP1Q96AH0 204 aa8.22□□□□□ -1.09
MSH5-218ENST00000494646 SEPHS2Q99611 448 aa8.22□□□□□ -1.09
MSH5-218ENST00000494646 LRMDAQ9H2I8 198 aa8.22□□□□□ -1.09
MSH5-218ENST00000494646 MAN2C1Q9NTJ4 1040 aa8.22□□□□□ -1.09
MSH5-218ENST00000494646 LPAR3Q9UBY5 353 aa8.22□□□□□ -1.09
MSH5-218ENST00000494646 HIF3AQ9Y2N7 669 aa8.22□□□□□ -1.09
MSH5-218ENST00000494646 AP3M1Q9Y2T2 418 aa8.22□□□□□ -1.09
MSH5-218ENST00000494646 A0A1W2PPL8 197 aa8.21□□□□□ -1.1
MSH5-218ENST00000494646 SLC22A23A1A5C7 686 aa8.21□□□□□ -1.1
MSH5-218ENST00000494646 C5orf49A4QMS7 147 aa8.21□□□□□ -1.1
MSH5-218ENST00000494646 EFCAB9A8MZ26 197 aa8.21□□□□□ -1.1
MSH5-218ENST00000494646 H7C1C5 153 aa8.21□□□□□ -1.1
MSH5-218ENST00000494646 WNT9BO14905 357 aa8.21□□□□□ -1.1
MSH5-218ENST00000494646 PPIHO43447 177 aaKnown RBP8.21□□□□□ -1.1
MSH5-218ENST00000494646 NCR1O76036 304 aa8.21□□□□□ -1.1
MSH5-218ENST00000494646 SCG5P05408 212 aa8.21□□□□□ -1.1
MSH5-218ENST00000494646 SRD5A1P18405 259 aa8.21□□□□□ -1.1
MSH5-218ENST00000494646 STOMP27105 288 aa8.21□□□□□ -1.1
MSH5-218ENST00000494646 LAP3P28838 519 aa8.21□□□□□ -1.1
MSH5-218ENST00000494646 GPR4P46093 362 aa8.21□□□□□ -1.1
MSH5-218ENST00000494646 GPR6P46095 362 aaPredicted RBP8.21□□□□□ -1.1
MSH5-218ENST00000494646 NUDT2P50583 147 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms