RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 ZNF331Q9NQX6 463 aaPredicted RBP2.93□□□□□ -1.94
SMC4-224ENST00000494612 CCL28Q9NRJ3 127 aa2.93□□□□□ -1.94
SMC4-224ENST00000494612 COX16Q9P0S2 106 aa2.93□□□□□ -1.94
SMC4-224ENST00000494612 CLCF1Q9UBD9 225 aa2.93□□□□□ -1.94
SMC4-224ENST00000494612 CTNNA3Q9UI47 895 aa2.93□□□□□ -1.94
SMC4-224ENST00000494612 ZNF639Q9UID6 485 aa2.93□□□□□ -1.94
SMC4-224ENST00000494612 ZNF223Q9UK11 482 aaPredicted RBP2.93□□□□□ -1.94
SMC4-224ENST00000494612 TRAPPC4Q9Y296 219 aa2.93□□□□□ -1.94
SMC4-224ENST00000494612 NPTNQ9Y639 398 aa2.93□□□□□ -1.94
SMC4-224ENST00000494612 CENPFP49454 3210 aa2.93□□□□□ -1.94
SMC4-224ENST00000494612 NUP98P52948 1817 aa2.93□□□□□ -1.94
SMC4-224ENST00000494612 DDX60Q8IY21 1712 aaKnown RBP2.93□□□□□ -1.94
SMC4-224ENST00000494612 MAP3K15Q6ZN16 1313 aa2.93□□□□□ -1.94
SMC4-224ENST00000494612 UBN2Q6ZU65 1347 aa2.93□□□□□ -1.94
SMC4-224ENST00000494612 BRCA2P51587 3418 aa2.92□□□□□ -1.94
SMC4-224ENST00000494612 IBTKQ9P2D0 1353 aaPredicted RBP2.92□□□□□ -1.94
SMC4-224ENST00000494612 A0A0G2JN53 185 aa2.92□□□□□ -1.94
SMC4-224ENST00000494612 OR52A4PA6NMU1 304 aa2.92□□□□□ -1.94
SMC4-224ENST00000494612 ERVV-1B6SEH8 477 aa2.92□□□□□ -1.94
SMC4-224ENST00000494612 KRTAP4-16G5E9R7 235 aaPredicted RBP2.92□□□□□ -1.94
SMC4-224ENST00000494612 PPP1R2P9O14990 202 aa2.92□□□□□ -1.94
SMC4-224ENST00000494612 TOP1P11387 765 aaKnown RBP2.92□□□□□ -1.94
SMC4-224ENST00000494612 NR2C1P13056 603 aa2.92□□□□□ -1.94
SMC4-224ENST00000494612 RPS2P15880 293 aaKnown RBP2.92□□□□□ -1.94
SMC4-224ENST00000494612 MGMTP16455 207 aa2.92□□□□□ -1.94
SMC4-224ENST00000494612 CNR1P21554 472 aa2.92□□□□□ -1.94
SMC4-224ENST00000494612 HNRNPH3P31942 346 aaKnown RBP2.92□□□□□ -1.94
SMC4-224ENST00000494612 DDX39BQ13838 428 aaKnown RBP2.92□□□□□ -1.94
SMC4-224ENST00000494612 GK3PQ14409 553 aa2.92□□□□□ -1.94
SMC4-224ENST00000494612 PSG5Q15238 335 aa2.92□□□□□ -1.94
SMC4-224ENST00000494612 CYTH1Q15438 398 aa2.92□□□□□ -1.94
SMC4-224ENST00000494612 CCDC183Q5T5S1 534 aa2.92□□□□□ -1.94
SMC4-224ENST00000494612 ZNF621Q6ZSS3 439 aa2.92□□□□□ -1.94
SMC4-224ENST00000494612 UBE2J2Q8N2K1 259 aa2.92□□□□□ -1.94
SMC4-224ENST00000494612 LINC01555Q8NAE3 123 aa2.92□□□□□ -1.94
SMC4-224ENST00000494612 OR13C2Q8NGS9 318 aa2.92□□□□□ -1.94
SMC4-224ENST00000494612 SMARCD2Q92925 531 aa2.92□□□□□ -1.94
SMC4-224ENST00000494612 TM4SF19Q96DZ7 209 aa2.92□□□□□ -1.94
SMC4-224ENST00000494612 ZNF285Q96NJ3 590 aa2.92□□□□□ -1.94
SMC4-224ENST00000494612 RIOK1Q9BRS2 568 aaKnown RBP2.92□□□□□ -1.94
SMC4-224ENST00000494612 SRMSQ9H3Y6 488 aa2.92□□□□□ -1.94
SMC4-224ENST00000494612 ANKRD19PQ9H560 264 aa2.92□□□□□ -1.94
SMC4-224ENST00000494612 LY9Q9HBG7 655 aa2.92□□□□□ -1.94
SMC4-224ENST00000494612 EML4Q9HC35 981 aaKnown RBP2.92□□□□□ -1.94
SMC4-224ENST00000494612 IL26Q9NPH9 171 aa2.92□□□□□ -1.94
SMC4-224ENST00000494612 CALYQ9NYX4 217 aa2.92□□□□□ -1.94
SMC4-224ENST00000494612 TP53TG5Q9Y2B4 290 aa2.92□□□□□ -1.94
SMC4-224ENST00000494612 SZT2Q5T011 3432 aa2.92□□□□□ -1.94
SMC4-224ENST00000494612 LAMB2P55268 1798 aa2.92□□□□□ -1.94
SMC4-224ENST00000494612 CEMIPQ8WUJ3 1361 aa2.91□□□□□ -1.94
SMC4-224ENST00000494612 FAM166BA8MTA8 275 aa2.91□□□□□ -1.94
SMC4-224ENST00000494612 C12orf71A8MTZ7 269 aa2.91□□□□□ -1.94
SMC4-224ENST00000494612 TBPP20226 339 aa2.91□□□□□ -1.94
SMC4-224ENST00000494612 MX1P20591 662 aa2.91□□□□□ -1.94
SMC4-224ENST00000494612 MDKP21741 143 aaPredicted RBP2.91□□□□□ -1.94
SMC4-224ENST00000494612 ATP5C1P36542 298 aaKnown RBP2.91□□□□□ -1.94
SMC4-224ENST00000494612 LHX2P50458 406 aa2.91□□□□□ -1.94
SMC4-224ENST00000494612 IRX3P78415 501 aaPredicted RBP2.91□□□□□ -1.94
SMC4-224ENST00000494612 PPIL2Q13356 520 aa2.91□□□□□ -1.94
SMC4-224ENST00000494612 LRRC10Q5BKY1 277 aa2.91□□□□□ -1.94
SMC4-224ENST00000494612 CYB5R2Q6BCY4 276 aa2.91□□□□□ -1.94
SMC4-224ENST00000494612 TGIF2LXQ8IUE1 241 aa2.91□□□□□ -1.94
SMC4-224ENST00000494612 OR2G2Q8NGZ5 317 aa2.91□□□□□ -1.94
SMC4-224ENST00000494612 ACOT11Q8WXI4 607 aaPredicted RBP2.91□□□□□ -1.94
SMC4-224ENST00000494612 RNF185Q96GF1 192 aa2.91□□□□□ -1.94
SMC4-224ENST00000494612 CYYR1Q96J86 154 aa2.91□□□□□ -1.94
SMC4-224ENST00000494612 SLC35E1Q96K37 410 aa2.91□□□□□ -1.94
SMC4-224ENST00000494612 CNDP1Q96KN2 507 aa2.91□□□□□ -1.94
SMC4-224ENST00000494612 HSFY1Q96LI6 401 aa2.91□□□□□ -1.94
SMC4-224ENST00000494612 OR2M2Q96R28 347 aa2.91□□□□□ -1.94
SMC4-224ENST00000494612 RARRES2Q99969 163 aa2.91□□□□□ -1.94
SMC4-224ENST00000494612 TCHPQ9BT92 498 aa2.91□□□□□ -1.94
SMC4-224ENST00000494612 TMEM59Q9BXS4 323 aa2.91□□□□□ -1.94
SMC4-224ENST00000494612 PLA2G2FQ9BZM2 168 aa2.91□□□□□ -1.94
SMC4-224ENST00000494612 METTL7AQ9H8H3 244 aa2.91□□□□□ -1.94
SMC4-224ENST00000494612 SLCO1B3Q9NPD5 702 aa2.91□□□□□ -1.94
SMC4-224ENST00000494612 SLC25A37Q9NYZ2 338 aa2.91□□□□□ -1.94
SMC4-224ENST00000494612 ANKRD36CQ5JPF3 1778 aa2.91□□□□□ -1.94
SMC4-224ENST00000494612 HTTP42858 3142 aa2.91□□□□□ -1.94
SMC4-224ENST00000494612 ZNF609O15014 1411 aa2.91□□□□□ -1.94
SMC4-224ENST00000494612 RLFQ13129 1914 aa2.91□□□□□ -1.94
SMC4-224ENST00000494612 COL6A3P12111 3177 aa2.91□□□□□ -1.94
SMC4-224ENST00000494612 DUOX1Q9NRD9 1551 aa2.91□□□□□ -1.94
SMC4-224ENST00000494612 LRRC37AA6NMS7 1700 aa2.9□□□□□ -1.94
SMC4-224ENST00000494612 RTL9Q8NET4 1388 aa2.9□□□□□ -1.94
SMC4-224ENST00000494612 TRBV6-6A0A0A6YYG2 114 aa2.9□□□□□ -1.95
SMC4-224ENST00000494612 CIB4A0PJX0 185 aa2.9□□□□□ -1.95
SMC4-224ENST00000494612 TMX2-CTNND1H3BSU7 103 aa2.9□□□□□ -1.95
SMC4-224ENST00000494612 AP3B1O00203 1094 aa2.9□□□□□ -1.95
SMC4-224ENST00000494612 CA11O75493 328 aa2.9□□□□□ -1.95
SMC4-224ENST00000494612 ERLIN2O94905 339 aa2.9□□□□□ -1.95
SMC4-224ENST00000494612 CASP14P31944 242 aa2.9□□□□□ -1.95
SMC4-224ENST00000494612 RORAP35398 523 aa2.9□□□□□ -1.95
SMC4-224ENST00000494612 SSR1P43307 286 aaKnown RBP2.9□□□□□ -1.95
SMC4-224ENST00000494612 GYG1P46976 350 aa2.9□□□□□ -1.95
SMC4-224ENST00000494612 CDH4P55283 916 aa2.9□□□□□ -1.95
SMC4-224ENST00000494612 FZD2Q14332 565 aa2.9□□□□□ -1.95
SMC4-224ENST00000494612 MPPED2Q15777 294 aa2.9□□□□□ -1.95
SMC4-224ENST00000494612 RABL6Q3YEC7 729 aaPredicted RBP2.9□□□□□ -1.95
SMC4-224ENST00000494612 C6orf226Q5I0X4 101 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms