RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 SGCAQ16586 387 aa11.78□□□□□ -0.52
COL1A1-208ENST00000494334 SLC36A3Q495N2 470 aa11.78□□□□□ -0.52
COL1A1-208ENST00000494334 ZNF672Q499Z4 452 aaPredicted RBP11.78□□□□□ -0.52
COL1A1-208ENST00000494334 SLC35F1Q5T1Q4 408 aa11.78□□□□□ -0.52
COL1A1-208ENST00000494334 LEG1Q6P5S2 330 aa11.78□□□□□ -0.52
COL1A1-208ENST00000494334 PAMR1Q6UXH9 720 aa11.78□□□□□ -0.52
COL1A1-208ENST00000494334 SLC16A14Q7RTX9 510 aa11.78□□□□□ -0.52
COL1A1-208ENST00000494334 CDH24Q86UP0 819 aa11.78□□□□□ -0.52
COL1A1-208ENST00000494334 MYPOPQ86VE0 399 aaPredicted RBP11.78□□□□□ -0.52
COL1A1-208ENST00000494334 JAZF1Q86VZ6 243 aa11.78□□□□□ -0.52
COL1A1-208ENST00000494334 LRRC18Q8N456 261 aa11.78□□□□□ -0.52
COL1A1-208ENST00000494334 ATG16L2Q8NAA4 619 aa11.78□□□□□ -0.52
COL1A1-208ENST00000494334 OR4Q3Q8NH05 313 aa11.78□□□□□ -0.52
COL1A1-208ENST00000494334 SNX18Q96RF0 628 aa11.78□□□□□ -0.52
COL1A1-208ENST00000494334 NMNAT3Q96T66 252 aa11.78□□□□□ -0.52
COL1A1-208ENST00000494334 NUAK2Q9H093 628 aa11.78□□□□□ -0.52
COL1A1-208ENST00000494334 ST6GALNAC2Q9UJ37 374 aa11.78□□□□□ -0.52
COL1A1-208ENST00000494334 CADP27708 2225 aa11.77□□□□□ -0.53
COL1A1-208ENST00000494334 A0A1W2PPL8 197 aa11.77□□□□□ -0.53
COL1A1-208ENST00000494334 H3BNX3 289 aa11.77□□□□□ -0.53
COL1A1-208ENST00000494334 DCTN6O00399 190 aa11.77□□□□□ -0.53
COL1A1-208ENST00000494334 HS3ST1O14792 307 aa11.77□□□□□ -0.53
COL1A1-208ENST00000494334 KHDRBS3O75525 346 aaKnown RBP11.77□□□□□ -0.53
COL1A1-208ENST00000494334 SCG5P05408 212 aa11.77□□□□□ -0.53
COL1A1-208ENST00000494334 OSMP13725 252 aa11.77□□□□□ -0.53
COL1A1-208ENST00000494334 LAP3P28838 519 aa11.77□□□□□ -0.53
COL1A1-208ENST00000494334 PTDSS1P48651 473 aaKnown RBP11.77□□□□□ -0.53
COL1A1-208ENST00000494334 DAPP51397 102 aa11.77□□□□□ -0.53
COL1A1-208ENST00000494334 IDH3GP51553 393 aaPredicted RBP11.77□□□□□ -0.53
COL1A1-208ENST00000494334 NAAAQ02083 359 aa11.77□□□□□ -0.53
COL1A1-208ENST00000494334 SLC36A2Q495M3 483 aa11.77□□□□□ -0.53
COL1A1-208ENST00000494334 ZNF362Q5T0B9 420 aaPredicted RBP11.77□□□□□ -0.53
COL1A1-208ENST00000494334 FAM27BQ5VT28 67 aa11.77□□□□□ -0.53
COL1A1-208ENST00000494334 SLC22A25Q6T423 547 aa11.77□□□□□ -0.53
COL1A1-208ENST00000494334 DPPA2Q7Z7J5 298 aa11.77□□□□□ -0.53
COL1A1-208ENST00000494334 HIPK1Q86Z02 1210 aa11.77□□□□□ -0.53
COL1A1-208ENST00000494334 DEPDC4Q8N2C3 294 aa11.77□□□□□ -0.53
COL1A1-208ENST00000494334 LNX2Q8N448 690 aa11.77□□□□□ -0.53
COL1A1-208ENST00000494334 ZNF611Q8N823 705 aa11.77□□□□□ -0.53
COL1A1-208ENST00000494334 NPEPL1Q8NDH3 523 aa11.77□□□□□ -0.53
COL1A1-208ENST00000494334 SDR9C7Q8NEX9 313 aa11.77□□□□□ -0.53
COL1A1-208ENST00000494334 OR2T33Q8NG76 320 aa11.77□□□□□ -0.53
COL1A1-208ENST00000494334 OR52E2Q8NGJ4 325 aa11.77□□□□□ -0.53
COL1A1-208ENST00000494334 MS4A3Q96HJ5 214 aa11.77□□□□□ -0.53
COL1A1-208ENST00000494334 FOXN4Q96NZ1 517 aa11.77□□□□□ -0.53
COL1A1-208ENST00000494334 TSSK2Q96PF2 358 aa11.77□□□□□ -0.53
COL1A1-208ENST00000494334 DDOQ99489 341 aa11.77□□□□□ -0.53
COL1A1-208ENST00000494334 SEMA6AQ9H2E6 1030 aa11.77□□□□□ -0.53
COL1A1-208ENST00000494334 RERGLQ9H628 205 aa11.77□□□□□ -0.53
COL1A1-208ENST00000494334 ZNF556Q9HAH1 456 aa11.77□□□□□ -0.53
COL1A1-208ENST00000494334 SRA1Q9HD15 236 aaKnown RBP11.77□□□□□ -0.53
COL1A1-208ENST00000494334 POLE4Q9NR33 117 aa11.77□□□□□ -0.53
COL1A1-208ENST00000494334 CISD1Q9NZ45 108 aaKnown RBP11.77□□□□□ -0.53
COL1A1-208ENST00000494334 B9D1Q9UPM9 204 aa11.77□□□□□ -0.53
COL1A1-208ENST00000494334 MOKQ9UQ07 419 aa11.77□□□□□ -0.53
COL1A1-208ENST00000494334 PLEKHA6Q9Y2H5 1048 aa11.77□□□□□ -0.53
COL1A1-208ENST00000494334 COA3Q9Y2R0 106 aaPredicted RBP11.77□□□□□ -0.53
COL1A1-208ENST00000494334 ITPR2Q14571 2701 aa11.76□□□□□ -0.53
COL1A1-208ENST00000494334 SPG11Q96JI7 2443 aa11.76□□□□□ -0.53
COL1A1-208ENST00000494334 OR6C68A6NDL8 312 aa11.76□□□□□ -0.53
COL1A1-208ENST00000494334 E7EQL1 145 aa11.76□□□□□ -0.53
COL1A1-208ENST00000494334 ATP6V1G2-DDX39BF2Z307 99 aa11.76□□□□□ -0.53
COL1A1-208ENST00000494334 G3V2T6 193 aa11.76□□□□□ -0.53
COL1A1-208ENST00000494334 H3BN98 237 aa11.76□□□□□ -0.53
COL1A1-208ENST00000494334 RAB36O95755 333 aa11.76□□□□□ -0.53
COL1A1-208ENST00000494334 RENP00797 406 aa11.76□□□□□ -0.53
COL1A1-208ENST00000494334 RAF1P04049 648 aa11.76□□□□□ -0.53
COL1A1-208ENST00000494334 MMP7P09237 267 aaPredicted RBP11.76□□□□□ -0.53
COL1A1-208ENST00000494334 ZNF14P17017 642 aaPredicted RBP11.76□□□□□ -0.53
COL1A1-208ENST00000494334 ZNF23P17027 643 aa11.76□□□□□ -0.53
COL1A1-208ENST00000494334 CD53P19397 219 aa11.76□□□□□ -0.53
COL1A1-208ENST00000494334 CRABP1P29762 137 aa11.76□□□□□ -0.53
COL1A1-208ENST00000494334 CALCRP30988 508 aa11.76□□□□□ -0.53
COL1A1-208ENST00000494334 GUCA1AP43080 201 aaPredicted RBP11.76□□□□□ -0.53
COL1A1-208ENST00000494334 CDH11P55287 796 aa11.76□□□□□ -0.53
COL1A1-208ENST00000494334 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.76□□□□□ -0.53
COL1A1-208ENST00000494334 DBPQ10586 325 aaPredicted RBP11.76□□□□□ -0.53
COL1A1-208ENST00000494334 KEAP1Q14145 624 aa11.76□□□□□ -0.53
COL1A1-208ENST00000494334 RAB39AQ14964 217 aa11.76□□□□□ -0.53
COL1A1-208ENST00000494334 ZSCAN26Q16670 478 aa11.76□□□□□ -0.53
COL1A1-208ENST00000494334 ZFP1Q6P2D0 407 aa11.76□□□□□ -0.53
COL1A1-208ENST00000494334 FAHD1Q6P587 224 aa11.76□□□□□ -0.53
COL1A1-208ENST00000494334 B3GLCTQ6Y288 498 aa11.76□□□□□ -0.53
COL1A1-208ENST00000494334 ZDHHC13Q8IUH4 622 aa11.76□□□□□ -0.53
COL1A1-208ENST00000494334 ZNF584Q8IVC4 421 aa11.76□□□□□ -0.53
COL1A1-208ENST00000494334 OR6V1Q8N148 313 aa11.76□□□□□ -0.53
COL1A1-208ENST00000494334 TEX47Q8TBZ9 253 aa11.76□□□□□ -0.53
COL1A1-208ENST00000494334 NINJ1Q92982 152 aa11.76□□□□□ -0.53
COL1A1-208ENST00000494334 FBXW5Q969U6 566 aa11.76□□□□□ -0.53
COL1A1-208ENST00000494334 FBXO17Q96EF6 278 aa11.76□□□□□ -0.53
COL1A1-208ENST00000494334 CENPNQ96H22 339 aaPredicted RBP11.76□□□□□ -0.53
COL1A1-208ENST00000494334 PKP2Q99959 881 aa11.76□□□□□ -0.53
COL1A1-208ENST00000494334 KCNN2Q9H2S1 579 aa11.76□□□□□ -0.53
COL1A1-208ENST00000494334 RNF121Q9H920 327 aa11.76□□□□□ -0.53
COL1A1-208ENST00000494334 RPRD1BQ9NQG5 326 aaKnown RBP11.76□□□□□ -0.53
COL1A1-208ENST00000494334 POU2F3Q9UKI9 436 aa11.76□□□□□ -0.53
COL1A1-208ENST00000494334 EDARQ9UNE0 448 aa11.76□□□□□ -0.53
COL1A1-208ENST00000494334 BAIAP2Q9UQB8 552 aa11.76□□□□□ -0.53
COL1A1-208ENST00000494334 APCP25054 2843 aa11.76□□□□□ -0.53
COL1A1-208ENST00000494334 ROS1P08922 2347 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms