RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 FBXW9Q5XUX1 488 aa4.47□□□□□ -1.69
PTCD3-219ENST00000494323 GPR139Q6DWJ6 353 aa4.47□□□□□ -1.69
PTCD3-219ENST00000494323 FAM166AQ6J272 317 aa4.47□□□□□ -1.69
PTCD3-219ENST00000494323 ZCCHC12Q6PEW1 402 aa4.47□□□□□ -1.69
PTCD3-219ENST00000494323 TMPPEQ6ZT21 453 aa4.47□□□□□ -1.69
PTCD3-219ENST00000494323 MTERF4Q7Z6M4 381 aaKnown RBP4.47□□□□□ -1.69
PTCD3-219ENST00000494323 P2RY8Q86VZ1 359 aa4.47□□□□□ -1.69
PTCD3-219ENST00000494323 PARP16Q8N5Y8 322 aa4.47□□□□□ -1.69
PTCD3-219ENST00000494323 TMCO5AQ8N6Q1 288 aa4.47□□□□□ -1.69
PTCD3-219ENST00000494323 OR7A2PQ8NGA2 310 aa4.47□□□□□ -1.69
PTCD3-219ENST00000494323 OR52E4Q8NGH9 312 aa4.47□□□□□ -1.69
PTCD3-219ENST00000494323 OR5W2Q8NH69 310 aa4.47□□□□□ -1.69
PTCD3-219ENST00000494323 PROX1Q92786 737 aa4.47□□□□□ -1.69
PTCD3-219ENST00000494323 FBXO17Q96EF6 278 aa4.47□□□□□ -1.69
PTCD3-219ENST00000494323 MS4A4EQ96PG1 132 aa4.47□□□□□ -1.69
PTCD3-219ENST00000494323 FAM110AQ9BQ89 295 aa4.47□□□□□ -1.69
PTCD3-219ENST00000494323 INPP5KQ9BT40 448 aa4.47□□□□□ -1.69
PTCD3-219ENST00000494323 TEX12Q9BXU0 123 aa4.47□□□□□ -1.69
PTCD3-219ENST00000494323 NPFFR1Q9GZQ6 430 aa4.47□□□□□ -1.69
PTCD3-219ENST00000494323 HOXD1Q9GZZ0 328 aa4.47□□□□□ -1.69
PTCD3-219ENST00000494323 IQCGQ9H095 443 aaKnown RBP4.47□□□□□ -1.69
PTCD3-219ENST00000494323 PIGUQ9H490 435 aa4.47□□□□□ -1.69
PTCD3-219ENST00000494323 EML4Q9HC35 981 aaKnown RBP4.47□□□□□ -1.69
PTCD3-219ENST00000494323 SIRT3Q9NTG7 399 aaPredicted RBP4.47□□□□□ -1.69
PTCD3-219ENST00000494323 ACSS1Q9NUB1 689 aaPredicted RBP4.47□□□□□ -1.69
PTCD3-219ENST00000494323 ZCCHC3Q9NUD5 404 aaKnown RBP4.47□□□□□ -1.69
PTCD3-219ENST00000494323 C1orf109Q9NX04 203 aa4.47□□□□□ -1.69
PTCD3-219ENST00000494323 MRPL15Q9P015 296 aaKnown RBP4.47□□□□□ -1.69
PTCD3-219ENST00000494323 DCDC2Q9UHG0 476 aa4.47□□□□□ -1.69
PTCD3-219ENST00000494323 EMCNQ9ULC0 261 aa4.47□□□□□ -1.69
PTCD3-219ENST00000494323 KCNS2Q9ULS6 477 aa4.47□□□□□ -1.69
PTCD3-219ENST00000494323 MGAT4BQ9UQ53 548 aa4.47□□□□□ -1.69
PTCD3-219ENST00000494323 STK38LQ9Y2H1 464 aa4.47□□□□□ -1.69
PTCD3-219ENST00000494323 NOSIPQ9Y314 301 aaKnown RBP4.47□□□□□ -1.69
PTCD3-219ENST00000494323 SLC25A15Q9Y619 301 aa4.47□□□□□ -1.69
PTCD3-219ENST00000494323 CEPT1Q9Y6K0 416 aa4.47□□□□□ -1.69
PTCD3-219ENST00000494323 WNK2Q9Y3S1 2297 aa4.46□□□□□ -1.7
PTCD3-219ENST00000494323 IGHV4-61A0A0C4DH41 118 aa4.46□□□□□ -1.7
PTCD3-219ENST00000494323 IGLV5-39A0A0G2JS06 123 aa4.46□□□□□ -1.7
PTCD3-219ENST00000494323 GOLGA8QA0A0J9YX86 632 aa4.46□□□□□ -1.7
PTCD3-219ENST00000494323 TMEM272A0A1B0GTI8 110 aa4.46□□□□□ -1.7
PTCD3-219ENST00000494323 LRP5LA4QPB2 252 aa4.46□□□□□ -1.7
PTCD3-219ENST00000494323 GOLGA8OA6NCC3 632 aa4.46□□□□□ -1.7
PTCD3-219ENST00000494323 ZNF716A6NP11 495 aa4.46□□□□□ -1.7
PTCD3-219ENST00000494323 ATP6V1G2-DDX39BF2Z307 99 aa4.46□□□□□ -1.7
PTCD3-219ENST00000494323 NPIPB9F8W1W9 429 aa4.46□□□□□ -1.7
PTCD3-219ENST00000494323 GOLGA8NF8WBI6 632 aa4.46□□□□□ -1.7
PTCD3-219ENST00000494323 H7C417 338 aa4.46□□□□□ -1.7
PTCD3-219ENST00000494323 SLC28A1O00337 649 aa4.46□□□□□ -1.7
PTCD3-219ENST00000494323 SOCS2O14508 198 aa4.46□□□□□ -1.7
PTCD3-219ENST00000494323 CFLARO15519 480 aa4.46□□□□□ -1.7
PTCD3-219ENST00000494323 ZNF264O43296 627 aa4.46□□□□□ -1.7
PTCD3-219ENST00000494323 MRPL33O75394 65 aaKnown RBP4.46□□□□□ -1.7
PTCD3-219ENST00000494323 TPPPO94811 219 aa4.46□□□□□ -1.7
PTCD3-219ENST00000494323 SLU7O95391 586 aaKnown RBP4.46□□□□□ -1.7
PTCD3-219ENST00000494323 HSPA4LO95757 839 aa4.46□□□□□ -1.7
PTCD3-219ENST00000494323 IFI6P09912 130 aa4.46□□□□□ -1.7
PTCD3-219ENST00000494323 UBTFL6P0CB48 400 aaPredicted RBP4.46□□□□□ -1.7
PTCD3-219ENST00000494323 BCKDHAP12694 445 aa4.46□□□□□ -1.7
PTCD3-219ENST00000494323 CPA3P15088 417 aa4.46□□□□□ -1.7
PTCD3-219ENST00000494323 ZNF182P17025 639 aaPredicted RBP4.46□□□□□ -1.7
PTCD3-219ENST00000494323 LCN1P31025 176 aa4.46□□□□□ -1.7
PTCD3-219ENST00000494323 FRKP42685 505 aaPredicted RBP4.46□□□□□ -1.7
PTCD3-219ENST00000494323 COMPP49747 757 aaPredicted RBP4.46□□□□□ -1.7
PTCD3-219ENST00000494323 RPL38P63173 70 aaKnown RBP4.46□□□□□ -1.7
PTCD3-219ENST00000494323 CHRNB3Q05901 458 aa4.46□□□□□ -1.7
PTCD3-219ENST00000494323 MERTKQ12866 999 aa4.46□□□□□ -1.7
PTCD3-219ENST00000494323 SELENBP1Q13228 472 aa4.46□□□□□ -1.7
PTCD3-219ENST00000494323 PDE7AQ13946 482 aa4.46□□□□□ -1.7
PTCD3-219ENST00000494323 TWIST1Q15672 202 aa4.46□□□□□ -1.7
PTCD3-219ENST00000494323 ADIPOQQ15848 244 aa4.46□□□□□ -1.7
PTCD3-219ENST00000494323 DCST2Q5T1A1 773 aa4.46□□□□□ -1.7
PTCD3-219ENST00000494323 PDZK1Q5T2W1 519 aa4.46□□□□□ -1.7
PTCD3-219ENST00000494323 LIPNQ5VXI9 398 aa4.46□□□□□ -1.7
PTCD3-219ENST00000494323 OR7E24Q6IFN5 339 aa4.46□□□□□ -1.7
PTCD3-219ENST00000494323 ZYG11AQ6WRX3 759 aa4.46□□□□□ -1.7
PTCD3-219ENST00000494323 LINGO2Q7L985 606 aa4.46□□□□□ -1.7
PTCD3-219ENST00000494323 HMGN2P46Q86SG4 172 aa4.46□□□□□ -1.7
PTCD3-219ENST00000494323 HAPLN4Q86UW8 402 aa4.46□□□□□ -1.7
PTCD3-219ENST00000494323 CLEC4FQ8N1N0 589 aa4.46□□□□□ -1.7
PTCD3-219ENST00000494323 WDR31Q8NA23 367 aa4.46□□□□□ -1.7
PTCD3-219ENST00000494323 NOA1Q8NC60 698 aaKnown RBP4.46□□□□□ -1.7
PTCD3-219ENST00000494323 OR5D16Q8NGK9 328 aa4.46□□□□□ -1.7
PTCD3-219ENST00000494323 OR5AK3PQ8NH89 298 aa4.46□□□□□ -1.7
PTCD3-219ENST00000494323 ANP32BQ92688 251 aaKnown RBP4.46□□□□□ -1.7
PTCD3-219ENST00000494323 TMEM18Q96B42 140 aa4.46□□□□□ -1.7
PTCD3-219ENST00000494323 APH1AQ96BI3 265 aa4.46□□□□□ -1.7
PTCD3-219ENST00000494323 ARL5BQ96KC2 179 aa4.46□□□□□ -1.7
PTCD3-219ENST00000494323 TMEM68Q96MH6 324 aa4.46□□□□□ -1.7
PTCD3-219ENST00000494323 MUS81Q96NY9 551 aa4.46□□□□□ -1.7
PTCD3-219ENST00000494323 STACQ99469 402 aa4.46□□□□□ -1.7
PTCD3-219ENST00000494323 SDF2Q99470 211 aa4.46□□□□□ -1.7
PTCD3-219ENST00000494323 FMO2Q99518 471 aa4.46□□□□□ -1.7
PTCD3-219ENST00000494323 LAT2Q9GZY6 243 aa4.46□□□□□ -1.7
PTCD3-219ENST00000494323 TSPYL1Q9H0U9 437 aa4.46□□□□□ -1.7
PTCD3-219ENST00000494323 TUBB1Q9H4B7 451 aa4.46□□□□□ -1.7
PTCD3-219ENST00000494323 SERINC1Q9NRX5 453 aa4.46□□□□□ -1.7
PTCD3-219ENST00000494323 FAF1Q9UNN5 650 aaPredicted RBP4.46□□□□□ -1.7
PTCD3-219ENST00000494323 MOKQ9UQ07 419 aa4.46□□□□□ -1.7
PTCD3-219ENST00000494323 TENM1Q9UKZ4 2725 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms