RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 GABREP78334 506 aa12.43□□□□□ -0.42
VCP-207ENST00000493886 HES5Q5TA89 166 aa12.43□□□□□ -0.42
VCP-207ENST00000493886 PYHIN1Q6K0P9 492 aa12.43□□□□□ -0.42
VCP-207ENST00000493886 PAPD4Q6PIY7 484 aaKnown RBP12.43□□□□□ -0.42
VCP-207ENST00000493886 SLC16A9Q7RTY1 509 aa12.43□□□□□ -0.42
VCP-207ENST00000493886 GRINAQ7Z429 371 aa12.43□□□□□ -0.42
VCP-207ENST00000493886 ADGRG3Q86Y34 549 aa12.43□□□□□ -0.42
VCP-207ENST00000493886 LIX1LQ8IVB5 337 aa12.43□□□□□ -0.42
VCP-207ENST00000493886 ZNF433Q8N7K0 673 aaPredicted RBP12.43□□□□□ -0.42
VCP-207ENST00000493886 OR2I1PQ8NGU4 316 aa12.43□□□□□ -0.42
VCP-207ENST00000493886 SLC25A36Q96CQ1 311 aa12.43□□□□□ -0.42
VCP-207ENST00000493886 KCTD12Q96CX2 325 aaKnown RBP12.43□□□□□ -0.42
VCP-207ENST00000493886 HYLS1Q96M11 299 aa12.43□□□□□ -0.42
VCP-207ENST00000493886 OR51J1Q9H342 316 aa12.43□□□□□ -0.42
VCP-207ENST00000493886 APMAPQ9HDC9 416 aa12.43□□□□□ -0.42
VCP-207ENST00000493886 SLCO1C1Q9NYB5 712 aa12.43□□□□□ -0.42
VCP-207ENST00000493886 TAS2R5Q9NYW4 299 aa12.43□□□□□ -0.42
VCP-207ENST00000493886 TMEM238LA0A1B0GVL6 79 aa12.43□□□□□ -0.42
VCP-207ENST00000493886 VSTM2BA6NLU5 285 aa12.43□□□□□ -0.42
VCP-207ENST00000493886 I3L521 148 aa12.43□□□□□ -0.42
VCP-207ENST00000493886 MT-ATP6P00846 226 aa12.43□□□□□ -0.42
VCP-207ENST00000493886 FBXW4P57775 412 aa12.43□□□□□ -0.42
VCP-207ENST00000493886 COL28A1Q2UY09 1125 aa12.43□□□□□ -0.42
VCP-207ENST00000493886 SFRP4Q6FHJ7 346 aaPredicted RBP12.43□□□□□ -0.42
VCP-207ENST00000493886 PPP1R3BQ86XI6 285 aa12.43□□□□□ -0.42
VCP-207ENST00000493886 OR8H3Q8N146 312 aa12.43□□□□□ -0.42
VCP-207ENST00000493886 NUBPLQ8TB37 319 aa12.43□□□□□ -0.42
VCP-207ENST00000493886 RANBP3Q9H6Z4 567 aaPredicted RBP12.43□□□□□ -0.42
VCP-207ENST00000493886 ZFP64Q9NPA5 681 aa12.43□□□□□ -0.42
VCP-207ENST00000493886 PPIEQ9UNP9 301 aaKnown RBP12.43□□□□□ -0.42
VCP-207ENST00000493886 FLVCR2Q9UPI3 526 aa12.43□□□□□ -0.42
VCP-207ENST00000493886 ANKRD61A6NGH8 418 aa12.42□□□□□ -0.42
VCP-207ENST00000493886 PRR32B1ATL7 298 aa12.42□□□□□ -0.42
VCP-207ENST00000493886 C11orf98E9PRG8 122 aa12.42□□□□□ -0.42
VCP-207ENST00000493886 LAMTOR5O43504 91 aa12.42□□□□□ -0.42
VCP-207ENST00000493886 NPIPB7O75200 414 aa12.42□□□□□ -0.42
VCP-207ENST00000493886 RENP00797 406 aa12.42□□□□□ -0.42
VCP-207ENST00000493886 CD1AP06126 327 aa12.42□□□□□ -0.42
VCP-207ENST00000493886 RPS11P62280 158 aaKnown RBP eCLIP12.42□□□□□ -0.42
VCP-207ENST00000493886 FAM69AQ5T7M9 428 aa12.42□□□□□ -0.42
VCP-207ENST00000493886 MISPQ8IVT2 679 aa12.42□□□□□ -0.42
VCP-207ENST00000493886 OR2T4Q8NH00 348 aa12.42□□□□□ -0.42
VCP-207ENST00000493886 IFI44Q8TCB0 444 aa12.42□□□□□ -0.42
VCP-207ENST00000493886 WDR77Q9BQA1 342 aaPredicted RBP12.42□□□□□ -0.42
VCP-207ENST00000493886 GLTPQ9NZD2 209 aa12.42□□□□□ -0.42
VCP-207ENST00000493886 TRBV11-1A0A0K0K1C0 115 aa12.42□□□□□ -0.42
VCP-207ENST00000493886 A8MVM7 634 aa12.42□□□□□ -0.42
VCP-207ENST00000493886 FLRT2O43155 660 aa12.42□□□□□ -0.42
VCP-207ENST00000493886 SSNA1O43805 119 aa12.42□□□□□ -0.42
VCP-207ENST00000493886 PHF19Q5T6S3 580 aa12.42□□□□□ -0.42
VCP-207ENST00000493886 OR5M10Q6IEU7 315 aa12.42□□□□□ -0.42
VCP-207ENST00000493886 TMEM65Q6PI78 240 aa12.42□□□□□ -0.42
VCP-207ENST00000493886 CREB3L2Q70SY1 520 aa12.42□□□□□ -0.42
VCP-207ENST00000493886 LINGO2Q7L985 606 aa12.42□□□□□ -0.42
VCP-207ENST00000493886 OR6V1Q8N148 313 aa12.42□□□□□ -0.42
VCP-207ENST00000493886 IFT46Q9NQC8 304 aa12.42□□□□□ -0.42
VCP-207ENST00000493886 TRBV23-1A0A0A0MS06 115 aa12.41□□□□□ -0.42
VCP-207ENST00000493886 TRAV1-2A0A0B4J238 106 aa12.41□□□□□ -0.42
VCP-207ENST00000493886 ONECUT2O95948 504 aa12.41□□□□□ -0.42
VCP-207ENST00000493886 EPXP11678 715 aa12.41□□□□□ -0.42
VCP-207ENST00000493886 BTN1A1Q13410 526 aa12.41□□□□□ -0.42
VCP-207ENST00000493886 SGCBQ16585 318 aa12.41□□□□□ -0.42
VCP-207ENST00000493886 ZNF684Q5T5D7 378 aa12.41□□□□□ -0.42
VCP-207ENST00000493886 C1orf140Q5VVS0 124 aa12.41□□□□□ -0.42
VCP-207ENST00000493886 LCN10Q6JVE6 187 aa12.41□□□□□ -0.42
VCP-207ENST00000493886 FAAP20Q6NZ36 180 aa12.41□□□□□ -0.42
VCP-207ENST00000493886 RELTQ969Z4 430 aa12.41□□□□□ -0.42
VCP-207ENST00000493886 SCMH1Q96GD3 660 aa12.41□□□□□ -0.42
VCP-207ENST00000493886 SPSB2Q99619 263 aa12.41□□□□□ -0.42
VCP-207ENST00000493886 SYT4Q9H2B2 425 aa12.41□□□□□ -0.42
VCP-207ENST00000493886 OCIAD1Q9NX40 245 aa12.41□□□□□ -0.42
VCP-207ENST00000493886 ING4Q9UNL4 249 aa12.41□□□□□ -0.42
VCP-207ENST00000493886 C2orf72A6NCS6 295 aa12.41□□□□□ -0.42
VCP-207ENST00000493886 TVP23AA6NH52 213 aa12.41□□□□□ -0.42
VCP-207ENST00000493886 GATBO75879 557 aaKnown RBP12.41□□□□□ -0.42
VCP-207ENST00000493886 ANXA3P12429 323 aa12.41□□□□□ -0.42
VCP-207ENST00000493886 BTG1P62324 171 aa12.41□□□□□ -0.42
VCP-207ENST00000493886 ST3GAL2Q16842 350 aa12.41□□□□□ -0.42
VCP-207ENST00000493886 CPEB2Q7Z5Q1 589 aaKnown RBP12.41□□□□□ -0.42
VCP-207ENST00000493886 TMEM68Q96MH6 324 aa12.41□□□□□ -0.42
VCP-207ENST00000493886 OR11A1Q9GZK7 315 aa12.41□□□□□ -0.42
VCP-207ENST00000493886 KLHDC2Q9Y2U9 406 aa12.41□□□□□ -0.42
VCP-207ENST00000493886 EXPH5Q8NEV8 1989 aa12.41□□□□□ -0.42
VCP-207ENST00000493886 TMEM200CA6NKL6 621 aa12.41□□□□□ -0.42
VCP-207ENST00000493886 PATE3B3GLJ2 98 aa12.41□□□□□ -0.42
VCP-207ENST00000493886 GPRIN2O60269 458 aa12.41□□□□□ -0.42
VCP-207ENST00000493886 ARL6IP5O75915 188 aa12.41□□□□□ -0.42
VCP-207ENST00000493886 UCHL1P09936 223 aa12.41□□□□□ -0.42
VCP-207ENST00000493886 ZXDAP98168 799 aa12.41□□□□□ -0.42
VCP-207ENST00000493886 CEP76Q8TAP6 659 aa12.41□□□□□ -0.42
VCP-207ENST00000493886 RPS4Y2Q8TD47 263 aa12.41□□□□□ -0.42
VCP-207ENST00000493886 C8orf44Q96CB5 159 aa12.41□□□□□ -0.42
VCP-207ENST00000493886 ADAD1Q96M93 576 aaKnown RBP12.41□□□□□ -0.42
VCP-207ENST00000493886 CRB3Q9BUF7 120 aa12.41□□□□□ -0.42
VCP-207ENST00000493886 CHIAQ9BZP6 476 aa12.41□□□□□ -0.42
VCP-207ENST00000493886 CNTRLQ7Z7A1 2325 aa12.4□□□□□ -0.42
VCP-207ENST00000493886 XKRYO14609 159 aa12.4□□□□□ -0.42
VCP-207ENST00000493886 RPP14O95059 124 aaKnown RBP12.4□□□□□ -0.42
VCP-207ENST00000493886 PLGP00747 810 aaPredicted RBP12.4□□□□□ -0.42
VCP-207ENST00000493886 TMEM11P17152 192 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms