RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 AADACL4Q5VUY2 407 aa10.95□□□□□ -0.66
SNX17-208ENST00000493711 PLBD1Q6P4A8 553 aa10.95□□□□□ -0.66
SNX17-208ENST00000493711 ANKRD16Q6P6B7 361 aa10.95□□□□□ -0.66
SNX17-208ENST00000493711 ZNF627Q7L945 461 aa10.95□□□□□ -0.66
SNX17-208ENST00000493711 ENTHD1Q8IYW4 607 aa10.95□□□□□ -0.66
SNX17-208ENST00000493711 GABRG1Q8N1C3 465 aa10.95□□□□□ -0.66
SNX17-208ENST00000493711 C17orf78Q8N4C9 275 aa10.95□□□□□ -0.66
SNX17-208ENST00000493711 PTP4A1Q93096 173 aa10.95□□□□□ -0.66
SNX17-208ENST00000493711 RBM24Q9BX46 236 aaKnown RBP10.95□□□□□ -0.66
SNX17-208ENST00000493711 OPN3Q9H1Y3 402 aaPredicted RBP10.95□□□□□ -0.66
SNX17-208ENST00000493711 OR10A4Q9H209 315 aa10.95□□□□□ -0.66
SNX17-208ENST00000493711 MOV10Q9HCE1 1003 aaKnown RBP10.95□□□□□ -0.66
SNX17-208ENST00000493711 SRA1Q9HD15 236 aaKnown RBP10.95□□□□□ -0.66
SNX17-208ENST00000493711 KCNJ16Q9NPI9 418 aa10.95□□□□□ -0.66
SNX17-208ENST00000493711 HINT3Q9NQE9 182 aaKnown RBP10.95□□□□□ -0.66
SNX17-208ENST00000493711 WARS2Q9UGM6 360 aaKnown RBP10.95□□□□□ -0.66
SNX17-208ENST00000493711 PRSS50Q9UI38 385 aa10.95□□□□□ -0.66
SNX17-208ENST00000493711 KCNG2Q9UJ96 466 aa10.95□□□□□ -0.66
SNX17-208ENST00000493711 GPR52Q9Y2T5 361 aa10.95□□□□□ -0.66
SNX17-208ENST00000493711 IGLV1-36A0A0B4J1U3 117 aa10.94□□□□□ -0.66
SNX17-208ENST00000493711 GLCEO94923 617 aa10.94□□□□□ -0.66
SNX17-208ENST00000493711 IGHV3-9P01782 118 aa10.94□□□□□ -0.66
SNX17-208ENST00000493711 CTLA4P16410 223 aa10.94□□□□□ -0.66
SNX17-208ENST00000493711 PSMB1P20618 241 aaKnown RBP10.94□□□□□ -0.66
SNX17-208ENST00000493711 COX5AP20674 150 aa10.94□□□□□ -0.66
SNX17-208ENST00000493711 LAP3P28838 519 aa10.94□□□□□ -0.66
SNX17-208ENST00000493711 CD79BP40259 229 aa10.94□□□□□ -0.66
SNX17-208ENST00000493711 PEX19P40855 299 aa10.94□□□□□ -0.66
SNX17-208ENST00000493711 ISL1P61371 349 aa10.94□□□□□ -0.66
SNX17-208ENST00000493711 POU4F2Q12837 409 aa10.94□□□□□ -0.66
SNX17-208ENST00000493711 MAD2L1BPQ15013 274 aaPredicted RBP10.94□□□□□ -0.66
SNX17-208ENST00000493711 KCNMB1Q16558 191 aa10.94□□□□□ -0.66
SNX17-208ENST00000493711 KRT80Q6KB66 452 aa10.94□□□□□ -0.66
SNX17-208ENST00000493711 FOXL2NBQ6ZUU3 175 aa10.94□□□□□ -0.66
SNX17-208ENST00000493711 NCCRP1Q6ZVX7 275 aaPredicted RBP10.94□□□□□ -0.66
SNX17-208ENST00000493711 MEPCEQ7L2J0 689 aaKnown RBP10.94□□□□□ -0.66
SNX17-208ENST00000493711 P2RY8Q86VZ1 359 aa10.94□□□□□ -0.66
SNX17-208ENST00000493711 OR6V1Q8N148 313 aa10.94□□□□□ -0.66
SNX17-208ENST00000493711 STEAP2Q8NFT2 490 aa10.94□□□□□ -0.66
SNX17-208ENST00000493711 KISS1RQ969F8 398 aaPredicted RBP10.94□□□□□ -0.66
SNX17-208ENST00000493711 ALKBH3Q96Q83 286 aaPredicted RBP10.94□□□□□ -0.66
SNX17-208ENST00000493711 FOXB1Q99853 325 aa10.94□□□□□ -0.66
SNX17-208ENST00000493711 OR51V1Q9H2C8 321 aa10.94□□□□□ -0.66
SNX17-208ENST00000493711 KCNN2Q9H2S1 579 aa10.94□□□□□ -0.66
SNX17-208ENST00000493711 SIAEQ9HAT2 523 aa10.94□□□□□ -0.66
SNX17-208ENST00000493711 RASSF1Q9NS23 344 aa10.94□□□□□ -0.66
SNX17-208ENST00000493711 HAO2Q9NYQ3 351 aa10.94□□□□□ -0.66
SNX17-208ENST00000493711 ZNF226Q9NYT6 803 aa10.94□□□□□ -0.66
SNX17-208ENST00000493711 LRRC42Q9Y546 428 aa10.94□□□□□ -0.66
SNX17-208ENST00000493711 POLEQ07864 2286 aa10.94□□□□□ -0.66
SNX17-208ENST00000493711 MED12Q93074 2177 aa10.94□□□□□ -0.66
SNX17-208ENST00000493711 DNAJC13O75165 2243 aa10.93□□□□□ -0.66
SNX17-208ENST00000493711 CIB4A0PJX0 185 aa10.93□□□□□ -0.66
SNX17-208ENST00000493711 IRGMA1A4Y4 181 aa10.93□□□□□ -0.66
SNX17-208ENST00000493711 FAM183AA6NL82 134 aa10.93□□□□□ -0.66
SNX17-208ENST00000493711 TMCC2O75069 709 aa10.93□□□□□ -0.66
SNX17-208ENST00000493711 CLDN14O95500 239 aa10.93□□□□□ -0.66
SNX17-208ENST00000493711 HLA-DQA2P01906 255 aa10.93□□□□□ -0.66
SNX17-208ENST00000493711 GNAO1P09471 354 aa10.93□□□□□ -0.66
SNX17-208ENST00000493711 OR8G3PP0DMU2 310 aa10.93□□□□□ -0.66
SNX17-208ENST00000493711 PPP3CBP16298 524 aa10.93□□□□□ -0.66
SNX17-208ENST00000493711 GABRB1P18505 474 aa10.93□□□□□ -0.66
SNX17-208ENST00000493711 MSR1P21757 451 aa10.93□□□□□ -0.66
SNX17-208ENST00000493711 GSTT1P30711 240 aa10.93□□□□□ -0.66
SNX17-208ENST00000493711 HTR1FP30939 366 aa10.93□□□□□ -0.66
SNX17-208ENST00000493711 HOXC12P31275 282 aa10.93□□□□□ -0.66
SNX17-208ENST00000493711 CDH11P55287 796 aa10.93□□□□□ -0.66
SNX17-208ENST00000493711 PCBD1P61457 104 aa10.93□□□□□ -0.66
SNX17-208ENST00000493711 RPS7P62081 194 aaKnown RBP10.93□□□□□ -0.66
SNX17-208ENST00000493711 LSM6P62312 80 aaKnown RBP10.93□□□□□ -0.66
SNX17-208ENST00000493711 ARF1P84077 181 aaKnown RBP10.93□□□□□ -0.66
SNX17-208ENST00000493711 HSF2Q03933 536 aa10.93□□□□□ -0.66
SNX17-208ENST00000493711 FMODQ06828 376 aa10.93□□□□□ -0.66
SNX17-208ENST00000493711 MED21Q13503 144 aa10.93□□□□□ -0.66
SNX17-208ENST00000493711 APOFQ13790 326 aa10.93□□□□□ -0.66
SNX17-208ENST00000493711 KLHL12Q53G59 568 aa10.93□□□□□ -0.66
SNX17-208ENST00000493711 PHYHD1Q5SRE7 291 aa10.93□□□□□ -0.66
SNX17-208ENST00000493711 SFRP5Q5T4F7 317 aa10.93□□□□□ -0.66
SNX17-208ENST00000493711 ZNF474Q6S9Z5 364 aaPredicted RBP10.93□□□□□ -0.66
SNX17-208ENST00000493711 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.93□□□□□ -0.66
SNX17-208ENST00000493711 LUZP2Q86TE4 346 aa10.93□□□□□ -0.66
SNX17-208ENST00000493711 LIX1LQ8IVB5 337 aa10.93□□□□□ -0.66
SNX17-208ENST00000493711 WDFY1Q8IWB7 410 aa10.93□□□□□ -0.66
SNX17-208ENST00000493711 ZNF433Q8N7K0 673 aaPredicted RBP10.93□□□□□ -0.66
SNX17-208ENST00000493711 RELL2Q8NC24 303 aaPredicted RBP10.93□□□□□ -0.66
SNX17-208ENST00000493711 OR10H5Q8NGA6 315 aa10.93□□□□□ -0.66
SNX17-208ENST00000493711 OR9Q1Q8NGQ5 310 aa10.93□□□□□ -0.66
SNX17-208ENST00000493711 FBLIM1Q8WUP2 373 aa10.93□□□□□ -0.66
SNX17-208ENST00000493711 NANOS1Q8WY41 292 aaKnown RBP10.93□□□□□ -0.66
SNX17-208ENST00000493711 NSMAFQ92636 917 aa10.93□□□□□ -0.66
SNX17-208ENST00000493711 ZNF582Q96NG8 517 aaPredicted RBP10.93□□□□□ -0.66
SNX17-208ENST00000493711 MYCBPQ99417 103 aaPredicted RBP10.93□□□□□ -0.66
SNX17-208ENST00000493711 TEAD3Q99594 435 aa10.93□□□□□ -0.66
SNX17-208ENST00000493711 NELFAQ9H3P2 528 aa10.93□□□□□ -0.66
SNX17-208ENST00000493711 RERGLQ9H628 205 aa10.93□□□□□ -0.66
SNX17-208ENST00000493711 SEC61A2Q9H9S3 476 aa10.93□□□□□ -0.66
SNX17-208ENST00000493711 OBP2BQ9NPH6 170 aa10.93□□□□□ -0.66
SNX17-208ENST00000493711 TMEM38BQ9NVV0 291 aa10.93□□□□□ -0.66
SNX17-208ENST00000493711 GALNT8Q9NY28 637 aa10.93□□□□□ -0.66
SNX17-208ENST00000493711 COA3Q9Y2R0 106 aaPredicted RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms