RNA–Protein interactions for RNA: ENST00000493608.1

COL6A3-214, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 742 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-214ENST00000493608 FARS2O95363 451 aaKnown RBP9.18□□□□□ -0.94
COL6A3-214ENST00000493608 IGF2P01344 180 aa9.18□□□□□ -0.94
COL6A3-214ENST00000493608 IGFBP1P08833 259 aaPredicted RBP9.18□□□□□ -0.94
COL6A3-214ENST00000493608 LYNX1P0DP58 116 aa9.18□□□□□ -0.94
COL6A3-214ENST00000493608 SLC25A16P16260 332 aa9.18□□□□□ -0.94
COL6A3-214ENST00000493608 LSP1P33241 339 aa9.18□□□□□ -0.94
COL6A3-214ENST00000493608 MSX2P35548 267 aaPredicted RBP9.18□□□□□ -0.94
COL6A3-214ENST00000493608 DAP3P51398 398 aaKnown RBP9.18□□□□□ -0.94
COL6A3-214ENST00000493608 ZNF84P51523 738 aa9.18□□□□□ -0.94
COL6A3-214ENST00000493608 GALK2Q01415 458 aa9.18□□□□□ -0.94
COL6A3-214ENST00000493608 LOXL1Q08397 574 aaPredicted RBP9.18□□□□□ -0.94
COL6A3-214ENST00000493608 CD47Q08722 323 aa9.18□□□□□ -0.94
COL6A3-214ENST00000493608 ANK3Q12955 4377 aaKnown RBP9.18□□□□□ -0.94
COL6A3-214ENST00000493608 GGTLC2Q14390 218 aa9.18□□□□□ -0.94
COL6A3-214ENST00000493608 SGCAQ16586 387 aa9.18□□□□□ -0.94
COL6A3-214ENST00000493608 TMEM249Q2WGJ8 235 aa9.18□□□□□ -0.94
COL6A3-214ENST00000493608 ALKBH6Q3KRA9 238 aa9.18□□□□□ -0.94
COL6A3-214ENST00000493608 GLYATQ6IB77 296 aa9.18□□□□□ -0.94
COL6A3-214ENST00000493608 TMEM53Q6P2H8 277 aa9.18□□□□□ -0.94
COL6A3-214ENST00000493608 HACD2Q6Y1H2 254 aa9.18□□□□□ -0.94
COL6A3-214ENST00000493608 ZNF730Q6ZMV8 503 aa9.18□□□□□ -0.94
COL6A3-214ENST00000493608 SLC16A14Q7RTX9 510 aa9.18□□□□□ -0.94
COL6A3-214ENST00000493608 OAFQ86UD1 273 aa9.18□□□□□ -0.94
COL6A3-214ENST00000493608 OFCC1Q8IZS5 231 aa9.18□□□□□ -0.94
COL6A3-214ENST00000493608 PAQR4Q8N4S7 273 aaPredicted RBP9.18□□□□□ -0.94
COL6A3-214ENST00000493608 OR13C2Q8NGS9 318 aa9.18□□□□□ -0.94
COL6A3-214ENST00000493608 RAB1BQ9H0U4 201 aa9.18□□□□□ -0.94
COL6A3-214ENST00000493608 DENND2DQ9H6A0 471 aaPredicted RBP9.18□□□□□ -0.94
COL6A3-214ENST00000493608 DYNLRB1Q9NP97 96 aa9.18□□□□□ -0.94
COL6A3-214ENST00000493608 MYEF2Q9P2K5 600 aaKnown RBP9.18□□□□□ -0.94
COL6A3-214ENST00000493608 HIF3AQ9Y2N7 669 aa9.18□□□□□ -0.94
COL6A3-214ENST00000493608 SPEF1Q9Y4P9 236 aa9.18□□□□□ -0.94
COL6A3-214ENST00000493608 EFCAB9A8MZ26 197 aa9.17□□□□□ -0.94
COL6A3-214ENST00000493608 CDC42EP2O14613 210 aa9.17□□□□□ -0.94
COL6A3-214ENST00000493608 CRLF1O75462 422 aa9.17□□□□□ -0.94
COL6A3-214ENST00000493608 DIRAS1O95057 198 aa9.17□□□□□ -0.94
COL6A3-214ENST00000493608 PRSS23O95084 383 aa9.17□□□□□ -0.94
COL6A3-214ENST00000493608 SERPINA5P05154 406 aa9.17□□□□□ -0.94
COL6A3-214ENST00000493608 IGHV4-31P0DP07 118 aa9.17□□□□□ -0.94
COL6A3-214ENST00000493608 DAOP14920 347 aa9.17□□□□□ -0.94
COL6A3-214ENST00000493608 USF1P22415 310 aaPredicted RBP9.17□□□□□ -0.94
COL6A3-214ENST00000493608 GLRXP35754 106 aa9.17□□□□□ -0.94
COL6A3-214ENST00000493608 ALDH3B1P43353 468 aa9.17□□□□□ -0.94
COL6A3-214ENST00000493608 NR4A2P43354 598 aa9.17□□□□□ -0.94
COL6A3-214ENST00000493608 GPR4P46093 362 aa9.17□□□□□ -0.94
COL6A3-214ENST00000493608 PPOXP50336 477 aa9.17□□□□□ -0.94
COL6A3-214ENST00000493608 RPL27P61353 136 aaKnown RBP9.17□□□□□ -0.94
COL6A3-214ENST00000493608 ERVS71-1P61550 626 aa9.17□□□□□ -0.94
COL6A3-214ENST00000493608 GNGT1P63211 74 aa9.17□□□□□ -0.94
COL6A3-214ENST00000493608 PRKCDQ05655 676 aa9.17□□□□□ -0.94
COL6A3-214ENST00000493608 FHL1Q13642 323 aa9.17□□□□□ -0.94
COL6A3-214ENST00000493608 MAD2L1BPQ15013 274 aaPredicted RBP9.17□□□□□ -0.94
COL6A3-214ENST00000493608 IQCCQ4KMZ1 466 aa9.17□□□□□ -0.94
COL6A3-214ENST00000493608 FAM86B1Q8N7N1 296 aa9.17□□□□□ -0.94
COL6A3-214ENST00000493608 LRRC75AQ8NAA5 344 aa9.17□□□□□ -0.94
COL6A3-214ENST00000493608 SLC30A7Q8NEW0 376 aa9.17□□□□□ -0.94
COL6A3-214ENST00000493608 MRPL24Q96A35 216 aaKnown RBP9.17□□□□□ -0.94
COL6A3-214ENST00000493608 PIMREGQ9BSJ6 248 aa9.17□□□□□ -0.94
COL6A3-214ENST00000493608 KRTAP4-8Q9BYQ9 185 aa9.17□□□□□ -0.94
COL6A3-214ENST00000493608 NSRP1Q9H0G5 558 aaKnown RBP9.17□□□□□ -0.94
COL6A3-214ENST00000493608 NMNAT1Q9HAN9 279 aaPredicted RBP9.17□□□□□ -0.94
COL6A3-214ENST00000493608 ARL8BQ9NVJ2 186 aa9.17□□□□□ -0.94
COL6A3-214ENST00000493608 ABCD2Q9UBJ2 740 aa9.17□□□□□ -0.94
COL6A3-214ENST00000493608 DUSP13Q9UII6 198 aa9.17□□□□□ -0.94
COL6A3-214ENST00000493608 V9GYQ6 96 aa9.17□□□□□ -0.94
COL6A3-214ENST00000493608 IGHV4-61A0A0C4DH41 118 aa9.16□□□□□ -0.94
COL6A3-214ENST00000493608 A8MV72 311 aaPredicted RBP9.16□□□□□ -0.94
COL6A3-214ENST00000493608 VWC2LB2RUY7 222 aa9.16□□□□□ -0.94
COL6A3-214ENST00000493608 H7C1C5 153 aa9.16□□□□□ -0.94
COL6A3-214ENST00000493608 TLX2O43763 284 aaPredicted RBP9.16□□□□□ -0.94
COL6A3-214ENST00000493608 CLPTM1O96005 669 aa9.16□□□□□ -0.94
COL6A3-214ENST00000493608 CSF3P09919 207 aa9.16□□□□□ -0.94
COL6A3-214ENST00000493608 CCNOP22674 350 aa9.16□□□□□ -0.94
COL6A3-214ENST00000493608 APEX1P27695 318 aaKnown RBP9.16□□□□□ -0.94
COL6A3-214ENST00000493608 PRDX6P30041 224 aa9.16□□□□□ -0.94
COL6A3-214ENST00000493608 LCN6P62502 163 aa9.16□□□□□ -0.94
COL6A3-214ENST00000493608 ERVK-25P63136 954 aa9.16□□□□□ -0.94
COL6A3-214ENST00000493608 PLP2Q04941 152 aa9.16□□□□□ -0.94
COL6A3-214ENST00000493608 FXNQ16595 210 aa9.16□□□□□ -0.94
COL6A3-214ENST00000493608 SLC36A2Q495M3 483 aa9.16□□□□□ -0.94
COL6A3-214ENST00000493608 C10orf128Q5T292 105 aa9.16□□□□□ -0.94
COL6A3-214ENST00000493608 C6orf52Q5T4I8 152 aa9.16□□□□□ -0.94
COL6A3-214ENST00000493608 PODNL1Q6PEZ8 512 aa9.16□□□□□ -0.94
COL6A3-214ENST00000493608 SLC25A47Q6Q0C1 308 aa9.16□□□□□ -0.94
COL6A3-214ENST00000493608 MBOAT2Q6ZWT7 520 aa9.16□□□□□ -0.94
COL6A3-214ENST00000493608 RRM2BQ7LG56 351 aa9.16□□□□□ -0.94
COL6A3-214ENST00000493608 HDDC2Q7Z4H3 204 aa9.16□□□□□ -0.94
COL6A3-214ENST00000493608 CYP4Z1Q86W10 505 aa9.16□□□□□ -0.94
COL6A3-214ENST00000493608 RNF113BQ8IZP6 322 aaKnown RBP9.16□□□□□ -0.94
COL6A3-214ENST00000493608 ICA1LQ8NDH6 482 aa9.16□□□□□ -0.94
COL6A3-214ENST00000493608 CPEB3Q8NE35 698 aaKnown RBP9.16□□□□□ -0.94
COL6A3-214ENST00000493608 OR52J3Q8NH60 311 aa9.16□□□□□ -0.94
COL6A3-214ENST00000493608 AKR7LQ8NHP1 331 aa9.16□□□□□ -0.94
COL6A3-214ENST00000493608 ACOT11Q8WXI4 607 aaPredicted RBP9.16□□□□□ -0.94
COL6A3-214ENST00000493608 NABP1Q96AH0 204 aa9.16□□□□□ -0.94
COL6A3-214ENST00000493608 NMD3Q96D46 503 aaKnown RBP9.16□□□□□ -0.94
COL6A3-214ENST00000493608 FAM46AQ96IP4 442 aaKnown RBP9.16□□□□□ -0.94
COL6A3-214ENST00000493608 MEGF10Q96KG7 1140 aa9.16□□□□□ -0.94
COL6A3-214ENST00000493608 TSPAN32Q96QS1 320 aa9.16□□□□□ -0.94
COL6A3-214ENST00000493608 RBP7Q96R05 134 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms