RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 KHDRBS3O75525 346 aaKnown RBP15.11■□□□□ 0.01
LIME1-208ENST00000493265 RAD51DO75771 328 aa15.11■□□□□ 0.01
LIME1-208ENST00000493265 CLDN14O95500 239 aa15.11■□□□□ 0.01
LIME1-208ENST00000493265 ITGA5P08648 1049 aa15.11■□□□□ 0.01
LIME1-208ENST00000493265 GNAO1P09471 354 aa15.11■□□□□ 0.01
LIME1-208ENST00000493265 SPI1P17947 270 aa15.11■□□□□ 0.01
LIME1-208ENST00000493265 CRABP1P29762 137 aa15.11■□□□□ 0.01
LIME1-208ENST00000493265 RPS7P62081 194 aaKnown RBP15.11■□□□□ 0.01
LIME1-208ENST00000493265 KEAP1Q14145 624 aa15.11■□□□□ 0.01
LIME1-208ENST00000493265 SGCAQ16586 387 aa15.11■□□□□ 0.01
LIME1-208ENST00000493265 DEPDC4Q8N2C3 294 aa15.11■□□□□ 0.01
LIME1-208ENST00000493265 FNDC8Q8TC99 324 aa15.11■□□□□ 0.01
LIME1-208ENST00000493265 ZNRF4Q8WWF5 429 aa15.11■□□□□ 0.01
LIME1-208ENST00000493265 MUS81Q96NY9 551 aa15.11■□□□□ 0.01
LIME1-208ENST00000493265 SNX18Q96RF0 628 aa15.11■□□□□ 0.01
LIME1-208ENST00000493265 DDOQ99489 341 aa15.11■□□□□ 0.01
LIME1-208ENST00000493265 APOL4Q9BPW4 351 aa15.11■□□□□ 0.01
LIME1-208ENST00000493265 ZNF226Q9NYT6 803 aa15.11■□□□□ 0.01
LIME1-208ENST00000493265 TAS2R16Q9NYV7 291 aa15.11■□□□□ 0.01
LIME1-208ENST00000493265 DNAJC27Q9NZQ0 273 aa15.11■□□□□ 0.01
LIME1-208ENST00000493265 B9D1Q9UPM9 204 aa15.11■□□□□ 0.01
LIME1-208ENST00000493265 NCOA6Q14686 2063 aaPredicted RBP15.1■□□□□ 0.01
LIME1-208ENST00000493265 FREM1Q5H8C1 2179 aa15.1■□□□□ 0.01
LIME1-208ENST00000493265 E9PQ18 207 aa15.1■□□□□ 0.01
LIME1-208ENST00000493265 H0YAE9 185 aa15.1■□□□□ 0.01
LIME1-208ENST00000493265 CNOT4O95628 575 aaKnown RBP15.1■□□□□ 0.01
LIME1-208ENST00000493265 HLA-DQA2P01906 255 aa15.1■□□□□ 0.01
LIME1-208ENST00000493265 B4GALT1P15291 398 aa15.1■□□□□ 0.01
LIME1-208ENST00000493265 IL32P24001 234 aa15.1■□□□□ 0.01
LIME1-208ENST00000493265 GRNP28799 593 aaKnown RBP15.1■□□□□ 0.01
LIME1-208ENST00000493265 CD79BP40259 229 aa15.1■□□□□ 0.01
LIME1-208ENST00000493265 P2RY6Q15077 328 aa15.1■□□□□ 0.01
LIME1-208ENST00000493265 ALKBH2Q6NS38 261 aa15.1■□□□□ 0.01
LIME1-208ENST00000493265 KLHL24Q6TFL4 600 aa15.1■□□□□ 0.01
LIME1-208ENST00000493265 ZNF813Q6ZN06 617 aa15.1■□□□□ 0.01
LIME1-208ENST00000493265 BHLHA15Q7RTS1 189 aaPredicted RBP15.1■□□□□ 0.01
LIME1-208ENST00000493265 ENTHD1Q8IYW4 607 aa15.1■□□□□ 0.01
LIME1-208ENST00000493265 ZNF433Q8N7K0 673 aaPredicted RBP15.1■□□□□ 0.01
LIME1-208ENST00000493265 OR6K6Q8NGW6 343 aa15.1■□□□□ 0.01
LIME1-208ENST00000493265 OR2T4Q8NH00 348 aa15.1■□□□□ 0.01
LIME1-208ENST00000493265 TFAP2CQ92754 450 aa15.1■□□□□ 0.01
LIME1-208ENST00000493265 PTP4A1Q93096 173 aa15.1■□□□□ 0.01
LIME1-208ENST00000493265 KISS1RQ969F8 398 aaPredicted RBP15.1■□□□□ 0.01
LIME1-208ENST00000493265 H2AFY2Q9P0M6 372 aaPredicted RBP15.1■□□□□ 0.01
LIME1-208ENST00000493265 ALPK2Q86TB3 2170 aa15.09■□□□□ 0.01
LIME1-208ENST00000493265 IGLV1-36A0A0B4J1U3 117 aa15.09■□□□□ 0.01
LIME1-208ENST00000493265 TVP23AA6NH52 213 aa15.09■□□□□ 0.01
LIME1-208ENST00000493265 ZNF99A8MXY4 864 aaPredicted RBP15.09■□□□□ 0.01
LIME1-208ENST00000493265 RPL36A-HNRNPH2H7BZ11 118 aa15.09■□□□□ 0.01
LIME1-208ENST00000493265 MPZL1O95297 269 aa15.09■□□□□ 0.01
LIME1-208ENST00000493265 AGAP20933 346 aa15.09■□□□□ 0.01
LIME1-208ENST00000493265 GUCA1AP43080 201 aaPredicted RBP15.09■□□□□ 0.01
LIME1-208ENST00000493265 HSPA13P48723 471 aa15.09■□□□□ 0.01
LIME1-208ENST00000493265 SLC25A1P53007 311 aa15.09■□□□□ 0.01
LIME1-208ENST00000493265 TGFBR3Q03167 851 aa15.09■□□□□ 0.01
LIME1-208ENST00000493265 APOFQ13790 326 aa15.09■□□□□ 0.01
LIME1-208ENST00000493265 SNTB1Q13884 538 aaKnown RBP15.09■□□□□ 0.01
LIME1-208ENST00000493265 STK11Q15831 433 aa15.09■□□□□ 0.01
LIME1-208ENST00000493265 HIKESHIQ53FT3 197 aa15.09■□□□□ 0.01
LIME1-208ENST00000493265 C10orf128Q5T292 105 aa15.09■□□□□ 0.01
LIME1-208ENST00000493265 SFRP5Q5T4F7 317 aa15.09■□□□□ 0.01
LIME1-208ENST00000493265 ZNF691Q5VV52 312 aa15.09■□□□□ 0.01
LIME1-208ENST00000493265 B3GLCTQ6Y288 498 aa15.09■□□□□ 0.01
LIME1-208ENST00000493265 STAC2Q6ZMT1 411 aa15.09■□□□□ 0.01
LIME1-208ENST00000493265 OR8J1Q8NGP2 316 aa15.09■□□□□ 0.01
LIME1-208ENST00000493265 LRRC46Q96FV0 321 aa15.09■□□□□ 0.01
LIME1-208ENST00000493265 ZNF184Q99676 751 aaPredicted RBP15.09■□□□□ 0.01
LIME1-208ENST00000493265 FOXB1Q99853 325 aa15.09■□□□□ 0.01
LIME1-208ENST00000493265 NMNAT2Q9BZQ4 307 aa15.09■□□□□ 0.01
LIME1-208ENST00000493265 ELOVL5Q9NYP7 299 aa15.09■□□□□ 0.01
LIME1-208ENST00000493265 UGT2A1Q9Y4X1 527 aa15.09■□□□□ 0.01
LIME1-208ENST00000493265 FKBP7Q9Y680 259 aa15.09■□□□□ 0.01
LIME1-208ENST00000493265 FBN2P35556 2912 aa15.08■□□□□ 0
LIME1-208ENST00000493265 A0A1W2PR80 420 aa15.08■□□□□ 0
LIME1-208ENST00000493265 SH3D21A4FU49 640 aa15.08■□□□□ 0
LIME1-208ENST00000493265 COX5AP20674 150 aa15.08■□□□□ 0
LIME1-208ENST00000493265 LAP3P28838 519 aa15.08■□□□□ 0
LIME1-208ENST00000493265 CAPZA2P47755 286 aa15.08■□□□□ 0
LIME1-208ENST00000493265 ZNF133P52736 654 aaPredicted RBP15.08■□□□□ 0
LIME1-208ENST00000493265 EFNB1P98172 346 aa15.08■□□□□ 0
LIME1-208ENST00000493265 MEP1BQ16820 701 aa15.08■□□□□ 0
LIME1-208ENST00000493265 LYPD4Q6UWN0 246 aa15.08■□□□□ 0
LIME1-208ENST00000493265 ZBTB46Q86UZ6 589 aa15.08■□□□□ 0
LIME1-208ENST00000493265 GLB1L2Q8IW92 636 aa15.08■□□□□ 0
LIME1-208ENST00000493265 C8orf59Q8N0T1 100 aaPredicted RBP15.08■□□□□ 0
LIME1-208ENST00000493265 LRRC18Q8N456 261 aa15.08■□□□□ 0
LIME1-208ENST00000493265 SETD9Q8NE22 299 aa15.08■□□□□ 0
LIME1-208ENST00000493265 OR1K1Q8NGR3 316 aa15.08■□□□□ 0
LIME1-208ENST00000493265 RNASE6Q93091 150 aaKnown RBP15.08■□□□□ 0
LIME1-208ENST00000493265 ZMYND19Q96E35 227 aaPredicted RBP15.08■□□□□ 0
LIME1-208ENST00000493265 SH3GL3Q99963 347 aa15.08■□□□□ 0
LIME1-208ENST00000493265 EMC7Q9NPA0 242 aa15.08■□□□□ 0
LIME1-208ENST00000493265 TMEM38BQ9NVV0 291 aa15.08■□□□□ 0
LIME1-208ENST00000493265 PDZD2O15018 2839 aa15.08■□□□□ 0
LIME1-208ENST00000493265 PCNX1Q96RV3 2341 aa15.08■□□□□ 0
LIME1-208ENST00000493265 CSMD2Q7Z408 3487 aa15.07■□□□□ 0
LIME1-208ENST00000493265 C16orf97H3BN30 126 aa15.07■□□□□ 0
LIME1-208ENST00000493265 ENTPD6O75354 484 aa15.07■□□□□ 0
LIME1-208ENST00000493265 SCG5P05408 212 aa15.07■□□□□ 0
LIME1-208ENST00000493265 UGT2B10P36537 528 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms