RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 GRIP1Q9Y3R0 1128 aa10.68□□□□□ -0.7
COL6A1-205ENST00000492851 A0A0A6YYJ9 748 aa10.67□□□□□ -0.7
COL6A1-205ENST00000492851 LOC100653049A0A140TA62 436 aa10.67□□□□□ -0.7
COL6A1-205ENST00000492851 ELOVL7A1L3X0 281 aa10.67□□□□□ -0.7
COL6A1-205ENST00000492851 FAM220BPB1ANY3 271 aa10.67□□□□□ -0.7
COL6A1-205ENST00000492851 LYNX1G3V0Z9 82 aa10.67□□□□□ -0.7
COL6A1-205ENST00000492851 FXYD1O00168 92 aa10.67□□□□□ -0.7
COL6A1-205ENST00000492851 NDUFAB1O14561 156 aa10.67□□□□□ -0.7
COL6A1-205ENST00000492851 PPIHO43447 177 aaKnown RBP10.67□□□□□ -0.7
COL6A1-205ENST00000492851 KRT34O76011 436 aa10.67□□□□□ -0.7
COL6A1-205ENST00000492851 FAM157BP0CG42 384 aa10.67□□□□□ -0.7
COL6A1-205ENST00000492851 LYNX1P0DP58 116 aa10.67□□□□□ -0.7
COL6A1-205ENST00000492851 SAGP10523 405 aaPredicted RBP10.67□□□□□ -0.7
COL6A1-205ENST00000492851 STOMP27105 288 aa10.67□□□□□ -0.7
COL6A1-205ENST00000492851 GCH1P30793 250 aa10.67□□□□□ -0.7
COL6A1-205ENST00000492851 CRYBB2P43320 205 aa10.67□□□□□ -0.7
COL6A1-205ENST00000492851 OR1E2P47887 323 aa10.67□□□□□ -0.7
COL6A1-205ENST00000492851 MYBPC1Q00872 1141 aa10.67□□□□□ -0.7
COL6A1-205ENST00000492851 RUNX1T1Q06455 604 aa10.67□□□□□ -0.7
COL6A1-205ENST00000492851 TRIP10Q15642 601 aa10.67□□□□□ -0.7
COL6A1-205ENST00000492851 ZNF718Q3SXZ3 478 aa10.67□□□□□ -0.7
COL6A1-205ENST00000492851 FAM27BQ5VT28 67 aa10.67□□□□□ -0.7
COL6A1-205ENST00000492851 ARL9Q6T311 187 aa10.67□□□□□ -0.7
COL6A1-205ENST00000492851 IL17RELQ6ZVW7 336 aa10.67□□□□□ -0.7
COL6A1-205ENST00000492851 RNF113BQ8IZP6 322 aaKnown RBP10.67□□□□□ -0.7
COL6A1-205ENST00000492851 LRRC18Q8N456 261 aa10.67□□□□□ -0.7
COL6A1-205ENST00000492851 CPEB3Q8NE35 698 aaKnown RBP10.67□□□□□ -0.7
COL6A1-205ENST00000492851 PFN4Q8NHR9 129 aa10.67□□□□□ -0.7
COL6A1-205ENST00000492851 BPIFA2Q96DR5 249 aa10.67□□□□□ -0.7
COL6A1-205ENST00000492851 TPD52L3Q96J77 140 aa10.67□□□□□ -0.7
COL6A1-205ENST00000492851 SOX7Q9BT81 388 aa10.67□□□□□ -0.7
COL6A1-205ENST00000492851 NDEL1Q9GZM8 345 aa10.67□□□□□ -0.7
COL6A1-205ENST00000492851 RACGAP1Q9H0H5 632 aa10.67□□□□□ -0.7
COL6A1-205ENST00000492851 CYSLTR2Q9NS75 346 aa10.67□□□□□ -0.7
COL6A1-205ENST00000492851 DECR2Q9NUI1 292 aa10.67□□□□□ -0.7
COL6A1-205ENST00000492851 CGGBP1Q9UFW8 167 aaPredicted RBP10.67□□□□□ -0.7
COL6A1-205ENST00000492851 FZR1Q9UM11 496 aa10.67□□□□□ -0.7
COL6A1-205ENST00000492851 CUBNO60494 3623 aa10.66□□□□□ -0.7
COL6A1-205ENST00000492851 PLSCR5A0PG75 271 aa10.66□□□□□ -0.7
COL6A1-205ENST00000492851 A6NIZ1 184 aa10.66□□□□□ -0.7
COL6A1-205ENST00000492851 IGHV3-13P01766 116 aa10.66□□□□□ -0.7
COL6A1-205ENST00000492851 IFNW1P05000 195 aa10.66□□□□□ -0.7
COL6A1-205ENST00000492851 MMP7P09237 267 aaPredicted RBP10.66□□□□□ -0.7
COL6A1-205ENST00000492851 TUBG1P23258 451 aa10.66□□□□□ -0.7
COL6A1-205ENST00000492851 IL2RGP31785 369 aa10.66□□□□□ -0.7
COL6A1-205ENST00000492851 SLC9A3P48764 834 aa10.66□□□□□ -0.7
COL6A1-205ENST00000492851 GDI2P50395 445 aaKnown RBP10.66□□□□□ -0.7
COL6A1-205ENST00000492851 RAP1BP61224 184 aa10.66□□□□□ -0.7
COL6A1-205ENST00000492851 RPL27P61353 136 aaKnown RBP10.66□□□□□ -0.7
COL6A1-205ENST00000492851 RAP1AP62834 184 aa10.66□□□□□ -0.7
COL6A1-205ENST00000492851 CD47Q08722 323 aa10.66□□□□□ -0.7
COL6A1-205ENST00000492851 CCNIQ14094 377 aa10.66□□□□□ -0.7
COL6A1-205ENST00000492851 LAPTM4AQ15012 233 aa10.66□□□□□ -0.7
COL6A1-205ENST00000492851 MAD2L1BPQ15013 274 aaPredicted RBP10.66□□□□□ -0.7
COL6A1-205ENST00000492851 SGCAQ16586 387 aa10.66□□□□□ -0.7
COL6A1-205ENST00000492851 KRTAP24-1Q3LI83 254 aa10.66□□□□□ -0.7
COL6A1-205ENST00000492851 LRRC23Q53EV4 343 aaPredicted RBP10.66□□□□□ -0.7
COL6A1-205ENST00000492851 PABPC1L2AQ5JQF8 200 aa10.66□□□□□ -0.7
COL6A1-205ENST00000492851 SYT9Q86SS6 491 aa10.66□□□□□ -0.7
COL6A1-205ENST00000492851 MICU2Q8IYU8 434 aa10.66□□□□□ -0.7
COL6A1-205ENST00000492851 OR1J1Q8NGS3 322 aa10.66□□□□□ -0.7
COL6A1-205ENST00000492851 OR51F2Q8NH61 342 aa10.66□□□□□ -0.7
COL6A1-205ENST00000492851 RP9Q8TA86 221 aaKnown RBP10.66□□□□□ -0.7
COL6A1-205ENST00000492851 TMEM186Q96B77 213 aa10.66□□□□□ -0.7
COL6A1-205ENST00000492851 PRRC1Q96M27 445 aa10.66□□□□□ -0.7
COL6A1-205ENST00000492851 HOPXQ9BPY8 73 aaPredicted RBP10.66□□□□□ -0.7
COL6A1-205ENST00000492851 FNDC11Q9BVV2 318 aa10.66□□□□□ -0.7
COL6A1-205ENST00000492851 C19orf24Q9BVV8 132 aa10.66□□□□□ -0.7
COL6A1-205ENST00000492851 TUBG2Q9NRH3 451 aa10.66□□□□□ -0.7
COL6A1-205ENST00000492851 ZNF275Q9NSD4 429 aaPredicted RBP10.66□□□□□ -0.7
COL6A1-205ENST00000492851 C20orf141Q9NUB4 165 aa10.66□□□□□ -0.7
COL6A1-205ENST00000492851 MYEF2Q9P2K5 600 aaKnown RBP10.66□□□□□ -0.7
COL6A1-205ENST00000492851 TIMM10BQ9Y5J6 103 aa10.66□□□□□ -0.7
COL6A1-205ENST00000492851 CAPN7Q9Y6W3 813 aa10.66□□□□□ -0.7
COL6A1-205ENST00000492851 YLPM1P49750 1951 aaKnown RBP10.65□□□□□ -0.7
COL6A1-205ENST00000492851 STAB1Q9NY15 2570 aa10.65□□□□□ -0.7
COL6A1-205ENST00000492851 TRAV20A0A0B4J274 112 aa10.65□□□□□ -0.7
COL6A1-205ENST00000492851 H3BSA7 217 aa10.65□□□□□ -0.7
COL6A1-205ENST00000492851 TPD52L2O43399 206 aaKnown RBP10.65□□□□□ -0.7
COL6A1-205ENST00000492851 AHCYL1O43865 530 aa10.65□□□□□ -0.7
COL6A1-205ENST00000492851 IGHMP01871 453 aa10.65□□□□□ -0.7
COL6A1-205ENST00000492851 MSMBP08118 114 aa10.65□□□□□ -0.7
COL6A1-205ENST00000492851 IFI30P13284 250 aa10.65□□□□□ -0.7
COL6A1-205ENST00000492851 CCL2P13500 99 aa10.65□□□□□ -0.7
COL6A1-205ENST00000492851 TNFRSF1BP20333 461 aa10.65□□□□□ -0.7
COL6A1-205ENST00000492851 CCNOP22674 350 aa10.65□□□□□ -0.7
COL6A1-205ENST00000492851 ARHGDIAP52565 204 aa10.65□□□□□ -0.7
COL6A1-205ENST00000492851 SLC3A1Q07837 685 aa10.65□□□□□ -0.7
COL6A1-205ENST00000492851 TRAM2Q15035 370 aa10.65□□□□□ -0.7
COL6A1-205ENST00000492851 HFEQ30201 348 aa10.65□□□□□ -0.7
COL6A1-205ENST00000492851 ZMAT1Q5H9K5 638 aa10.65□□□□□ -0.7
COL6A1-205ENST00000492851 SLC25A47Q6Q0C1 308 aa10.65□□□□□ -0.7
COL6A1-205ENST00000492851 RRM2BQ7LG56 351 aa10.65□□□□□ -0.7
COL6A1-205ENST00000492851 OAFQ86UD1 273 aa10.65□□□□□ -0.7
COL6A1-205ENST00000492851 PAQR4Q8N4S7 273 aaPredicted RBP10.65□□□□□ -0.7
COL6A1-205ENST00000492851 MOSPD2Q8NHP6 518 aa10.65□□□□□ -0.7
COL6A1-205ENST00000492851 CLDND2Q8NHS1 167 aa10.65□□□□□ -0.7
COL6A1-205ENST00000492851 HDAC2Q92769 488 aaKnown RBP10.65□□□□□ -0.7
COL6A1-205ENST00000492851 RAB1CQ92928 201 aa10.65□□□□□ -0.7
COL6A1-205ENST00000492851 RAB39BQ96DA2 213 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms