RNA–Protein interactions for RNA: ENST00000491421.5

LSM2-213, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-213ENST00000491421 CCDC22O60826 627 aa7.09□□□□□ -1.27
LSM2-213ENST00000491421 SNAP29O95721 258 aa7.09□□□□□ -1.27
LSM2-213ENST00000491421 LCKP06239 509 aa7.09□□□□□ -1.27
LSM2-213ENST00000491421 TACSTD2P09758 323 aa7.09□□□□□ -1.27
LSM2-213ENST00000491421 SAGP10523 405 aaPredicted RBP7.09□□□□□ -1.27
LSM2-213ENST00000491421 NAT2P11245 290 aa7.09□□□□□ -1.27
LSM2-213ENST00000491421 SRD5A1P18405 259 aa7.09□□□□□ -1.27
LSM2-213ENST00000491421 MAKP20794 623 aa7.09□□□□□ -1.27
LSM2-213ENST00000491421 APLNRP35414 380 aa7.09□□□□□ -1.27
LSM2-213ENST00000491421 MDH1P40925 334 aaKnown RBP7.09□□□□□ -1.27
LSM2-213ENST00000491421 RAD52P43351 418 aa7.09□□□□□ -1.27
LSM2-213ENST00000491421 ZNF133P52736 654 aaPredicted RBP7.09□□□□□ -1.27
LSM2-213ENST00000491421 KLF3P57682 345 aaPredicted RBP7.09□□□□□ -1.27
LSM2-213ENST00000491421 RPL27P61353 136 aaKnown RBP7.09□□□□□ -1.27
LSM2-213ENST00000491421 MRPS34P82930 218 aaKnown RBP7.09□□□□□ -1.27
LSM2-213ENST00000491421 FMODQ06828 376 aa7.09□□□□□ -1.27
LSM2-213ENST00000491421 TRAM2Q15035 370 aa7.09□□□□□ -1.27
LSM2-213ENST00000491421 TAF11Q15544 211 aa7.09□□□□□ -1.27
LSM2-213ENST00000491421 ALKBH6Q3KRA9 238 aa7.09□□□□□ -1.27
LSM2-213ENST00000491421 IFI44LQ53G44 452 aa7.09□□□□□ -1.27
LSM2-213ENST00000491421 PABPC1L2AQ5JQF8 200 aa7.09□□□□□ -1.27
LSM2-213ENST00000491421 ELFN2Q5R3F8 820 aa7.09□□□□□ -1.27
LSM2-213ENST00000491421 FAM120AOSQ5T036 256 aa7.09□□□□□ -1.27
LSM2-213ENST00000491421 IL17RELQ6ZVW7 336 aa7.09□□□□□ -1.27
LSM2-213ENST00000491421 FKBP9P1Q75LS8 142 aa7.09□□□□□ -1.27
LSM2-213ENST00000491421 NRMQ8IXM6 262 aa7.09□□□□□ -1.27
LSM2-213ENST00000491421 OFCC1Q8IZS5 231 aa7.09□□□□□ -1.27
LSM2-213ENST00000491421 ICA1LQ8NDH6 482 aa7.09□□□□□ -1.27
LSM2-213ENST00000491421 SYNPRQ8TBG9 265 aa7.09□□□□□ -1.27
LSM2-213ENST00000491421 GEMIN6Q8WXD5 167 aaKnown RBP7.09□□□□□ -1.27
LSM2-213ENST00000491421 TMEM158Q8WZ71 300 aa7.09□□□□□ -1.27
LSM2-213ENST00000491421 NSMAFQ92636 917 aa7.09□□□□□ -1.27
LSM2-213ENST00000491421 HDAC2Q92769 488 aaKnown RBP7.09□□□□□ -1.27
LSM2-213ENST00000491421 RDH5Q92781 318 aa7.09□□□□□ -1.27
LSM2-213ENST00000491421 HPS1Q92902 700 aa7.09□□□□□ -1.27
LSM2-213ENST00000491421 NMD3Q96D46 503 aaKnown RBP7.09□□□□□ -1.27
LSM2-213ENST00000491421 HSH2DQ96JZ2 352 aa7.09□□□□□ -1.27
LSM2-213ENST00000491421 HOPXQ9BPY8 73 aaPredicted RBP7.09□□□□□ -1.27
LSM2-213ENST00000491421 SOX7Q9BT81 388 aa7.09□□□□□ -1.27
LSM2-213ENST00000491421 ALG12Q9BV10 488 aa7.09□□□□□ -1.27
LSM2-213ENST00000491421 MAN2C1Q9NTJ4 1040 aa7.09□□□□□ -1.27
LSM2-213ENST00000491421 GPR160Q9UJ42 338 aa7.09□□□□□ -1.27
LSM2-213ENST00000491421 UGT2A1Q9Y4X1 527 aa7.09□□□□□ -1.27
LSM2-213ENST00000491421 SNX13Q9Y5W8 968 aa7.09□□□□□ -1.27
LSM2-213ENST00000491421 CHD3Q12873 2000 aaKnown RBP7.08□□□□□ -1.28
LSM2-213ENST00000491421 SVEP1Q4LDE5 3571 aa7.08□□□□□ -1.28
LSM2-213ENST00000491421 ARFGEF3Q5TH69 2177 aa7.08□□□□□ -1.28
LSM2-213ENST00000491421 FBN3Q75N90 2809 aa7.08□□□□□ -1.28
LSM2-213ENST00000491421 TRAV27A0A087WT01 109 aa7.08□□□□□ -1.28
LSM2-213ENST00000491421 IGKV1D-43A0A0B4J1Z2 117 aa7.08□□□□□ -1.28
LSM2-213ENST00000491421 A6NIZ1 184 aa7.08□□□□□ -1.28
LSM2-213ENST00000491421 EFCAB9A8MZ26 197 aa7.08□□□□□ -1.28
LSM2-213ENST00000491421 NME4O00746 187 aa7.08□□□□□ -1.28
LSM2-213ENST00000491421 NDUFAB1O14561 156 aa7.08□□□□□ -1.28
LSM2-213ENST00000491421 FFAR1O14842 300 aa7.08□□□□□ -1.28
LSM2-213ENST00000491421 LILRA1O75019 489 aa7.08□□□□□ -1.28
LSM2-213ENST00000491421 CLPTM1O96005 669 aa7.08□□□□□ -1.28
LSM2-213ENST00000491421 SERPINA1P01009 418 aa7.08□□□□□ -1.28
LSM2-213ENST00000491421 IGHMP01871 453 aa7.08□□□□□ -1.28
LSM2-213ENST00000491421 HPXP02790 462 aa7.08□□□□□ -1.28
LSM2-213ENST00000491421 MMP7P09237 267 aaPredicted RBP7.08□□□□□ -1.28
LSM2-213ENST00000491421 ZNF250P15622 560 aa7.08□□□□□ -1.28
LSM2-213ENST00000491421 FUT4P22083 530 aa7.08□□□□□ -1.28
LSM2-213ENST00000491421 ACHEP22303 614 aa7.08□□□□□ -1.28
LSM2-213ENST00000491421 CCNOP22674 350 aa7.08□□□□□ -1.28
LSM2-213ENST00000491421 IL2RGP31785 369 aa7.08□□□□□ -1.28
LSM2-213ENST00000491421 GUCA1AP43080 201 aaPredicted RBP7.08□□□□□ -1.28
LSM2-213ENST00000491421 GPR6P46095 362 aaPredicted RBP7.08□□□□□ -1.28
LSM2-213ENST00000491421 GSK3BP49841 420 aa7.08□□□□□ -1.28
LSM2-213ENST00000491421 NUDT2P50583 147 aa7.08□□□□□ -1.28
LSM2-213ENST00000491421 GYS2P54840 703 aa7.08□□□□□ -1.28
LSM2-213ENST00000491421 UCP2P55851 309 aa7.08□□□□□ -1.28
LSM2-213ENST00000491421 CTXN1P60606 82 aa7.08□□□□□ -1.28
LSM2-213ENST00000491421 RAP1BP61224 184 aa7.08□□□□□ -1.28
LSM2-213ENST00000491421 ERVS71-1P61550 626 aa7.08□□□□□ -1.28
LSM2-213ENST00000491421 RAP1AP62834 184 aa7.08□□□□□ -1.28
LSM2-213ENST00000491421 PRKCDQ05655 676 aa7.08□□□□□ -1.28
LSM2-213ENST00000491421 CCNIQ14094 377 aa7.08□□□□□ -1.28
LSM2-213ENST00000491421 TRIP10Q15642 601 aa7.08□□□□□ -1.28
LSM2-213ENST00000491421 SGCAQ16586 387 aa7.08□□□□□ -1.28
LSM2-213ENST00000491421 ANKDD1AQ495B1 522 aa7.08□□□□□ -1.28
LSM2-213ENST00000491421 THEM4Q5T1C6 240 aa7.08□□□□□ -1.28
LSM2-213ENST00000491421 FAM205BPQ63HN1 556 aa7.08□□□□□ -1.28
LSM2-213ENST00000491421 TMEM154Q6P9G4 183 aa7.08□□□□□ -1.28
LSM2-213ENST00000491421 UGT2A3Q6UWM9 527 aa7.08□□□□□ -1.28
LSM2-213ENST00000491421 HACD2Q6Y1H2 254 aa7.08□□□□□ -1.28
LSM2-213ENST00000491421 ZNF730Q6ZMV8 503 aa7.08□□□□□ -1.28
LSM2-213ENST00000491421 CBLL1Q75N03 491 aa7.08□□□□□ -1.28
LSM2-213ENST00000491421 OAFQ86UD1 273 aa7.08□□□□□ -1.28
LSM2-213ENST00000491421 IGFN1Q86VF2 1251 aa7.08□□□□□ -1.28
LSM2-213ENST00000491421 CYP4Z1Q86W10 505 aa7.08□□□□□ -1.28
LSM2-213ENST00000491421 MEX3DQ86XN8 651 aaKnown RBP7.08□□□□□ -1.28
LSM2-213ENST00000491421 CLDN22Q8N7P3 220 aa7.08□□□□□ -1.28
LSM2-213ENST00000491421 LINC01356Q8N9X3 169 aa7.08□□□□□ -1.28
LSM2-213ENST00000491421 CPEB3Q8NE35 698 aaKnown RBP7.08□□□□□ -1.28
LSM2-213ENST00000491421 OR13C2Q8NGS9 318 aa7.08□□□□□ -1.28
LSM2-213ENST00000491421 OR51A7Q8NH64 312 aa7.08□□□□□ -1.28
LSM2-213ENST00000491421 ZNF519Q8TB69 540 aa7.08□□□□□ -1.28
LSM2-213ENST00000491421 FNDC8Q8TC99 324 aa7.08□□□□□ -1.28
LSM2-213ENST00000491421 SNX33Q8WV41 574 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms