RNA–Protein interactions for RNA: ENST00000491104.1

CACNA1C-227, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 5

Gene CACNA1C, Length 669 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-227ENST00000491104 ZNF226Q9NYT6 803 aa9.44□□□□□ -0.9
CACNA1C-227ENST00000491104 NDRG4Q9ULP0 352 aaKnown RBP9.44□□□□□ -0.9
CACNA1C-227ENST00000491104 B9D1Q9UPM9 204 aa9.44□□□□□ -0.9
CACNA1C-227ENST00000491104 ZNF503-AS2A6NEH8 195 aa9.43□□□□□ -0.9
CACNA1C-227ENST00000491104 TVP23AA6NH52 213 aa9.43□□□□□ -0.9
CACNA1C-227ENST00000491104 C16orf97H3BN30 126 aa9.43□□□□□ -0.9
CACNA1C-227ENST00000491104 SLC16A6O15403 523 aa9.43□□□□□ -0.9
CACNA1C-227ENST00000491104 AHCYL1O43865 530 aa9.43□□□□□ -0.9
CACNA1C-227ENST00000491104 PATE4P0C8F1 98 aa9.43□□□□□ -0.9
CACNA1C-227ENST00000491104 NR2C1P13056 603 aa9.43□□□□□ -0.9
CACNA1C-227ENST00000491104 VHLP40337 213 aa9.43□□□□□ -0.9
CACNA1C-227ENST00000491104 SLC25A1P53007 311 aa9.43□□□□□ -0.9
CACNA1C-227ENST00000491104 CDC42P60953 191 aa9.43□□□□□ -0.9
CACNA1C-227ENST00000491104 ADARB1P78563 741 aaKnown RBP9.43□□□□□ -0.9
CACNA1C-227ENST00000491104 SNCBQ16143 134 aa9.43□□□□□ -0.9
CACNA1C-227ENST00000491104 SGCAQ16586 387 aa9.43□□□□□ -0.9
CACNA1C-227ENST00000491104 C6orf52Q5T4I8 152 aa9.43□□□□□ -0.9
CACNA1C-227ENST00000491104 UGT2A3Q6UWM9 527 aa9.43□□□□□ -0.9
CACNA1C-227ENST00000491104 B3GLCTQ6Y288 498 aa9.43□□□□□ -0.9
CACNA1C-227ENST00000491104 FOXL2NBQ6ZUU3 175 aa9.43□□□□□ -0.9
CACNA1C-227ENST00000491104 LRRC18Q8N456 261 aa9.43□□□□□ -0.9
CACNA1C-227ENST00000491104 DHRSXQ8N5I4 330 aa9.43□□□□□ -0.9
CACNA1C-227ENST00000491104 WDR31Q8NA23 367 aa9.43□□□□□ -0.9
CACNA1C-227ENST00000491104 PROKR2Q8NFJ6 384 aa9.43□□□□□ -0.9
CACNA1C-227ENST00000491104 OR52N5Q8NH56 324 aa9.43□□□□□ -0.9
CACNA1C-227ENST00000491104 FGFBP3Q8TAT2 258 aa9.43□□□□□ -0.9
CACNA1C-227ENST00000491104 TMEM163Q8TC26 289 aa9.43□□□□□ -0.9
CACNA1C-227ENST00000491104 FNDC8Q8TC99 324 aa9.43□□□□□ -0.9
CACNA1C-227ENST00000491104 BCL2L2Q92843 193 aaPredicted RBP9.43□□□□□ -0.9
CACNA1C-227ENST00000491104 PTP4A1Q93096 173 aa9.43□□□□□ -0.9
CACNA1C-227ENST00000491104 NABP1Q96AH0 204 aa9.43□□□□□ -0.9
CACNA1C-227ENST00000491104 LRRC46Q96FV0 321 aa9.43□□□□□ -0.9
CACNA1C-227ENST00000491104 SH3GL3Q99963 347 aa9.43□□□□□ -0.9
CACNA1C-227ENST00000491104 PRRG3Q9BZD7 231 aa9.43□□□□□ -0.9
CACNA1C-227ENST00000491104 RACGAP1Q9H0H5 632 aa9.43□□□□□ -0.9
CACNA1C-227ENST00000491104 VCX3BQ9H321 246 aa9.43□□□□□ -0.9
CACNA1C-227ENST00000491104 NOX3Q9HBY0 568 aa9.43□□□□□ -0.9
CACNA1C-227ENST00000491104 RASSF1Q9NS23 344 aa9.43□□□□□ -0.9
CACNA1C-227ENST00000491104 DNAJC27Q9NZQ0 273 aa9.43□□□□□ -0.9
CACNA1C-227ENST00000491104 FKBP7Q9Y680 259 aa9.43□□□□□ -0.9
CACNA1C-227ENST00000491104 HELZ2Q9BYK8 2649 aaKnown RBP9.43□□□□□ -0.9
CACNA1C-227ENST00000491104 PRR14LQ5THK1 2151 aa9.43□□□□□ -0.9
CACNA1C-227ENST00000491104 CCDC182A6NF36 153 aa9.42□□□□□ -0.9
CACNA1C-227ENST00000491104 GAAP10253 952 aa9.42□□□□□ -0.9
CACNA1C-227ENST00000491104 PSKH1P11801 424 aa9.42□□□□□ -0.9
CACNA1C-227ENST00000491104 PAICSP22234 425 aaKnown RBP9.42□□□□□ -0.9
CACNA1C-227ENST00000491104 SLC2A5P22732 501 aa9.42□□□□□ -0.9
CACNA1C-227ENST00000491104 LAP3P28838 519 aa9.42□□□□□ -0.9
CACNA1C-227ENST00000491104 CRABP1P29762 137 aa9.42□□□□□ -0.9
CACNA1C-227ENST00000491104 CAPGP40121 348 aa9.42□□□□□ -0.9
CACNA1C-227ENST00000491104 RPS27P42677 84 aaKnown RBP9.42□□□□□ -0.9
CACNA1C-227ENST00000491104 CAPZA2P47755 286 aa9.42□□□□□ -0.9
CACNA1C-227ENST00000491104 SH3BGRP55822 239 aaPredicted RBP9.42□□□□□ -0.9
CACNA1C-227ENST00000491104 RPS7P62081 194 aaKnown RBP9.42□□□□□ -0.9
CACNA1C-227ENST00000491104 MRPS34P82930 218 aaKnown RBP9.42□□□□□ -0.9
CACNA1C-227ENST00000491104 EFNB1P98172 346 aa9.42□□□□□ -0.9
CACNA1C-227ENST00000491104 IL5RAQ01344 420 aa9.42□□□□□ -0.9
CACNA1C-227ENST00000491104 APOFQ13790 326 aa9.42□□□□□ -0.9
CACNA1C-227ENST00000491104 KEAP1Q14145 624 aa9.42□□□□□ -0.9
CACNA1C-227ENST00000491104 TAB1Q15750 504 aa9.42□□□□□ -0.9
CACNA1C-227ENST00000491104 LINC01590Q5TEZ4 76 aa9.42□□□□□ -0.9
CACNA1C-227ENST00000491104 ANKRD16Q6P6B7 361 aa9.42□□□□□ -0.9
CACNA1C-227ENST00000491104 DNM1P34Q6PK57 102 aa9.42□□□□□ -0.9
CACNA1C-227ENST00000491104 ZBTB46Q86UZ6 589 aa9.42□□□□□ -0.9
CACNA1C-227ENST00000491104 SKA3Q8IX90 412 aa9.42□□□□□ -0.9
CACNA1C-227ENST00000491104 ENTHD1Q8IYW4 607 aa9.42□□□□□ -0.9
CACNA1C-227ENST00000491104 SLC22A24Q8N4F4 322 aa9.42□□□□□ -0.9
CACNA1C-227ENST00000491104 C1orf162Q8NEQ5 155 aaPredicted RBP9.42□□□□□ -0.9
CACNA1C-227ENST00000491104 STEAP2Q8NFT2 490 aa9.42□□□□□ -0.9
CACNA1C-227ENST00000491104 OR6K6Q8NGW6 343 aa9.42□□□□□ -0.9
CACNA1C-227ENST00000491104 OR2T4Q8NH00 348 aa9.42□□□□□ -0.9
CACNA1C-227ENST00000491104 C11orf40Q8WZ69 217 aa9.42□□□□□ -0.9
CACNA1C-227ENST00000491104 ZMYND19Q96E35 227 aaPredicted RBP9.42□□□□□ -0.9
CACNA1C-227ENST00000491104 MUS81Q96NY9 551 aa9.42□□□□□ -0.9
CACNA1C-227ENST00000491104 WFIKKN1Q96NZ8 548 aa9.42□□□□□ -0.9
CACNA1C-227ENST00000491104 C1QTNF6Q9BXI9 259 aa9.42□□□□□ -0.9
CACNA1C-227ENST00000491104 POLE4Q9NR33 117 aa9.42□□□□□ -0.9
CACNA1C-227ENST00000491104 SLC17A5Q9NRA2 495 aa9.42□□□□□ -0.9
CACNA1C-227ENST00000491104 MRPL22Q9NWU5 206 aaKnown RBP9.42□□□□□ -0.9
CACNA1C-227ENST00000491104 IMPAD1Q9NX62 359 aa9.42□□□□□ -0.9
CACNA1C-227ENST00000491104 ZNF224Q9NZL3 707 aa9.42□□□□□ -0.9
CACNA1C-227ENST00000491104 HLA-HP01893 362 aa9.41□□□□□ -0.9
CACNA1C-227ENST00000491104 HLA-DQA2P01906 255 aa9.41□□□□□ -0.9
CACNA1C-227ENST00000491104 TFP02787 698 aa9.41□□□□□ -0.9
CACNA1C-227ENST00000491104 THBDP07204 575 aa9.41□□□□□ -0.9
CACNA1C-227ENST00000491104 GNAO1P09471 354 aa9.41□□□□□ -0.9
CACNA1C-227ENST00000491104 GABRB1P18505 474 aa9.41□□□□□ -0.9
CACNA1C-227ENST00000491104 MSR1P21757 451 aa9.41□□□□□ -0.9
CACNA1C-227ENST00000491104 COL8A1P27658 744 aa9.41□□□□□ -0.9
CACNA1C-227ENST00000491104 HOXC12P31275 282 aa9.41□□□□□ -0.9
CACNA1C-227ENST00000491104 TGFBR3Q03167 851 aa9.41□□□□□ -0.9
CACNA1C-227ENST00000491104 ENDOGQ14249 297 aaKnown RBP9.41□□□□□ -0.9
CACNA1C-227ENST00000491104 AADACL4Q5VUY2 407 aa9.41□□□□□ -0.9
CACNA1C-227ENST00000491104 ZNF691Q5VV52 312 aa9.41□□□□□ -0.9
CACNA1C-227ENST00000491104 TTC23Q5W5X9 447 aa9.41□□□□□ -0.9
CACNA1C-227ENST00000491104 ZNF627Q7L945 461 aa9.41□□□□□ -0.9
CACNA1C-227ENST00000491104 WFDC8Q8IUA0 241 aa9.41□□□□□ -0.9
CACNA1C-227ENST00000491104 LINC00346Q8IVM7 164 aa9.41□□□□□ -0.9
CACNA1C-227ENST00000491104 GLB1L2Q8IW92 636 aa9.41□□□□□ -0.9
CACNA1C-227ENST00000491104 ZNF511Q8NB15 262 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms