RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 GUCA1AP43080 201 aaPredicted RBP16.87■□□□□ 0.29
SREBF1-216ENST00000490796 CCL8P80075 99 aa16.87■□□□□ 0.29
SREBF1-216ENST00000490796 PIN1Q13526 163 aaPredicted RBP16.87■□□□□ 0.29
SREBF1-216ENST00000490796 SGCAQ16586 387 aa16.87■□□□□ 0.29
SREBF1-216ENST00000490796 HIST3H3Q16695 136 aa16.87■□□□□ 0.29
SREBF1-216ENST00000490796 LRRC23Q53EV4 343 aaPredicted RBP16.87■□□□□ 0.29
SREBF1-216ENST00000490796 OR1J1Q8NGS3 322 aa16.87■□□□□ 0.29
SREBF1-216ENST00000490796 MRPL13Q9BYD1 178 aaKnown RBP16.87■□□□□ 0.29
SREBF1-216ENST00000490796 METTL17Q9H7H0 456 aaPredicted RBP16.87■□□□□ 0.29
SREBF1-216ENST00000490796 VIPAS39Q9H9C1 493 aa16.87■□□□□ 0.29
SREBF1-216ENST00000490796 GID8Q9NWU2 228 aa16.87■□□□□ 0.29
SREBF1-216ENST00000490796 BBIP1A8MTZ0 92 aa16.86■□□□□ 0.29
SREBF1-216ENST00000490796 IGF2P01344 180 aa16.86■□□□□ 0.29
SREBF1-216ENST00000490796 GAAP10253 952 aa16.86■□□□□ 0.29
SREBF1-216ENST00000490796 THRBP10828 461 aa16.86■□□□□ 0.29
SREBF1-216ENST00000490796 ITGA2P17301 1181 aa16.86■□□□□ 0.29
SREBF1-216ENST00000490796 GCH1P30793 250 aa16.86■□□□□ 0.29
SREBF1-216ENST00000490796 OR1E2P47887 323 aa16.86■□□□□ 0.29
SREBF1-216ENST00000490796 CRYBA2P53672 197 aa16.86■□□□□ 0.29
SREBF1-216ENST00000490796 ERVS71-1P61550 626 aa16.86■□□□□ 0.29
SREBF1-216ENST00000490796 TOP3AQ13472 1001 aaPredicted RBP16.86■□□□□ 0.29
SREBF1-216ENST00000490796 COQ5Q5HYK3 327 aa16.86■□□□□ 0.29
SREBF1-216ENST00000490796 PABPC1L2AQ5JQF8 200 aa16.86■□□□□ 0.29
SREBF1-216ENST00000490796 C10orf128Q5T292 105 aa16.86■□□□□ 0.29
SREBF1-216ENST00000490796 CALHM3Q86XJ0 350 aa16.86■□□□□ 0.29
SREBF1-216ENST00000490796 PCYOX1LQ8NBM8 494 aa16.86■□□□□ 0.29
SREBF1-216ENST00000490796 MOSPD2Q8NHP6 518 aa16.86■□□□□ 0.29
SREBF1-216ENST00000490796 NSMAFQ92636 917 aa16.86■□□□□ 0.29
SREBF1-216ENST00000490796 TPD52L3Q96J77 140 aa16.86■□□□□ 0.29
SREBF1-216ENST00000490796 LRRC37BQ96QE4 947 aa16.86■□□□□ 0.29
SREBF1-216ENST00000490796 TSPAN32Q96QS1 320 aa16.86■□□□□ 0.29
SREBF1-216ENST00000490796 IGLV3-9A0A075B6K5 115 aa16.85■□□□□ 0.29
SREBF1-216ENST00000490796 FAM157AC9JC47 383 aa16.85■□□□□ 0.29
SREBF1-216ENST00000490796 SLC2A10O95528 541 aa16.85■□□□□ 0.29
SREBF1-216ENST00000490796 STOMP27105 288 aa16.85■□□□□ 0.29
SREBF1-216ENST00000490796 CDAP32320 146 aa16.85■□□□□ 0.29
SREBF1-216ENST00000490796 GDI2P50395 445 aaKnown RBP16.85■□□□□ 0.29
SREBF1-216ENST00000490796 ARFIP2P53365 341 aa16.85■□□□□ 0.29
SREBF1-216ENST00000490796 MRPS34P82930 218 aaKnown RBP16.85■□□□□ 0.29
SREBF1-216ENST00000490796 MVKQ03426 396 aa16.85■□□□□ 0.29
SREBF1-216ENST00000490796 GLO1Q04760 184 aa16.85■□□□□ 0.29
SREBF1-216ENST00000490796 ST3GAL3Q11203 375 aa16.85■□□□□ 0.29
SREBF1-216ENST00000490796 LAPTM4AQ15012 233 aa16.85■□□□□ 0.29
SREBF1-216ENST00000490796 ZNF718Q3SXZ3 478 aa16.85■□□□□ 0.29
SREBF1-216ENST00000490796 CYBRD1Q53TN4 286 aa16.85■□□□□ 0.29
SREBF1-216ENST00000490796 ALG10Q5BKT4 473 aa16.85■□□□□ 0.29
SREBF1-216ENST00000490796 FAHD2BQ6P2I3 314 aaPredicted RBP16.85■□□□□ 0.29
SREBF1-216ENST00000490796 TEX29Q8N6K0 151 aa16.85■□□□□ 0.29
SREBF1-216ENST00000490796 C10orf82Q8WW14 230 aa16.85■□□□□ 0.29
SREBF1-216ENST00000490796 FAHD2AQ96GK7 314 aa16.85■□□□□ 0.29
SREBF1-216ENST00000490796 TIMD4Q96H15 378 aa16.85■□□□□ 0.29
SREBF1-216ENST00000490796 RBP7Q96R05 134 aa16.85■□□□□ 0.29
SREBF1-216ENST00000490796 RACGAP1Q9H0H5 632 aa16.85■□□□□ 0.29
SREBF1-216ENST00000490796 SMURF2Q9HAU4 748 aa16.85■□□□□ 0.29
SREBF1-216ENST00000490796 C20orf141Q9NUB4 165 aa16.85■□□□□ 0.29
SREBF1-216ENST00000490796 NKIRAS2Q9NYR9 191 aa16.85■□□□□ 0.29
SREBF1-216ENST00000490796 TRAV20A0A0B4J274 112 aa16.84■□□□□ 0.29
SREBF1-216ENST00000490796 IGHV1-69-2A0A0G2JMI3 117 aa16.84■□□□□ 0.29
SREBF1-216ENST00000490796 PLSCR5A0PG75 271 aa16.84■□□□□ 0.29
SREBF1-216ENST00000490796 WNT9BO14905 357 aa16.84■□□□□ 0.29
SREBF1-216ENST00000490796 RP2O75695 350 aa16.84■□□□□ 0.29
SREBF1-216ENST00000490796 MMP7P09237 267 aaPredicted RBP16.84■□□□□ 0.29
SREBF1-216ENST00000490796 TAF11Q15544 211 aa16.84■□□□□ 0.29
SREBF1-216ENST00000490796 TSTQ16762 297 aaKnown RBP16.84■□□□□ 0.29
SREBF1-216ENST00000490796 ARMC4Q5T2S8 1044 aa16.84■□□□□ 0.29
SREBF1-216ENST00000490796 AVPI1Q5T686 147 aa16.84■□□□□ 0.29
SREBF1-216ENST00000490796 ALDH16A1Q8IZ83 802 aa16.84■□□□□ 0.29
SREBF1-216ENST00000490796 LZICQ8WZA0 190 aa16.84■□□□□ 0.29
SREBF1-216ENST00000490796 RAB39BQ96DA2 213 aa16.84■□□□□ 0.29
SREBF1-216ENST00000490796 SEPHS2Q99611 448 aa16.84■□□□□ 0.29
SREBF1-216ENST00000490796 TXNIPQ9H3M7 391 aa16.84■□□□□ 0.29
SREBF1-216ENST00000490796 SAP30LQ9HAJ7 183 aa16.84■□□□□ 0.29
SREBF1-216ENST00000490796 LOC100653049A0A140TA62 436 aa16.83■□□□□ 0.28
SREBF1-216ENST00000490796 C5orf49A4QMS7 147 aa16.83■□□□□ 0.28
SREBF1-216ENST00000490796 HTR3EA5X5Y0 456 aa16.83■□□□□ 0.28
SREBF1-216ENST00000490796 NPIPB13A6NJU9 1138 aa16.83■□□□□ 0.28
SREBF1-216ENST00000490796 CLDN25C9JDP6 229 aa16.83■□□□□ 0.28
SREBF1-216ENST00000490796 NPIPB4C9JG80 1138 aa16.83■□□□□ 0.28
SREBF1-216ENST00000490796 KRT34O76011 436 aa16.83■□□□□ 0.28
SREBF1-216ENST00000490796 IFI30P13284 250 aa16.83■□□□□ 0.28
SREBF1-216ENST00000490796 ZNF32P17041 273 aa16.83■□□□□ 0.28
SREBF1-216ENST00000490796 KDELR2P33947 212 aa16.83■□□□□ 0.28
SREBF1-216ENST00000490796 CRYBB2P43320 205 aa16.83■□□□□ 0.28
SREBF1-216ENST00000490796 ZNF81P51508 661 aa16.83■□□□□ 0.28
SREBF1-216ENST00000490796 ZNF133P52736 654 aaPredicted RBP16.83■□□□□ 0.28
SREBF1-216ENST00000490796 FMODQ06828 376 aa16.83■□□□□ 0.28
SREBF1-216ENST00000490796 SF3A3Q12874 501 aaKnown RBP eCLIP16.83■□□□□ 0.281e-7■■■■□ 19.6
SREBF1-216ENST00000490796 KLF10Q13118 480 aa16.83■□□□□ 0.28
SREBF1-216ENST00000490796 HFEQ30201 348 aa16.83■□□□□ 0.28
SREBF1-216ENST00000490796 ACSM5Q6NUN0 579 aa16.83■□□□□ 0.28
SREBF1-216ENST00000490796 USP51Q70EK9 711 aa16.83■□□□□ 0.28
SREBF1-216ENST00000490796 OR2T12Q8NG77 320 aa16.83■□□□□ 0.28
SREBF1-216ENST00000490796 FNDC8Q8TC99 324 aa16.83■□□□□ 0.28
SREBF1-216ENST00000490796 LIPHQ8WWY8 451 aa16.83■□□□□ 0.28
SREBF1-216ENST00000490796 HDAC2Q92769 488 aaKnown RBP16.83■□□□□ 0.28
SREBF1-216ENST00000490796 ZNF583Q96ND8 569 aa16.83■□□□□ 0.28
SREBF1-216ENST00000490796 ALG12Q9BV10 488 aa16.83■□□□□ 0.28
SREBF1-216ENST00000490796 ZNF665Q9H7R5 613 aa16.83■□□□□ 0.28
SREBF1-216ENST00000490796 A0A0A6YYJ9 748 aa16.82■□□□□ 0.28
SREBF1-216ENST00000490796 FAM220BPB1ANY3 271 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms