RNA–Protein interactions for RNA: ENST00000490653.1

PRPF4B-208, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-208ENST00000490653 OR5F1O95221 314 aa6.28□□□□□ -1.4
PRPF4B-208ENST00000490653 SLC2A10O95528 541 aa6.28□□□□□ -1.4
PRPF4B-208ENST00000490653 TSPAN15O95858 294 aa6.28□□□□□ -1.4
PRPF4B-208ENST00000490653 MT-ND1P03886 318 aa6.28□□□□□ -1.4
PRPF4B-208ENST00000490653 TP53P04637 393 aaPredicted RBP6.28□□□□□ -1.4
PRPF4B-208ENST00000490653 HIST1H2ABP04908 130 aa6.28□□□□□ -1.4
PRPF4B-208ENST00000490653 TSPAN19P0C672 248 aa6.28□□□□□ -1.4
PRPF4B-208ENST00000490653 ACADSP16219 412 aa6.28□□□□□ -1.4
PRPF4B-208ENST00000490653 SLC25A16P16260 332 aa6.28□□□□□ -1.4
PRPF4B-208ENST00000490653 ZNF16P17020 682 aaPredicted RBP6.28□□□□□ -1.4
PRPF4B-208ENST00000490653 USF1P22415 310 aaPredicted RBP6.28□□□□□ -1.4
PRPF4B-208ENST00000490653 NR4A1P22736 598 aa6.28□□□□□ -1.4
PRPF4B-208ENST00000490653 MDH1P40925 334 aaKnown RBP6.28□□□□□ -1.4
PRPF4B-208ENST00000490653 GYS2P54840 703 aa6.28□□□□□ -1.4
PRPF4B-208ENST00000490653 DSCR9P59020 149 aa6.28□□□□□ -1.4
PRPF4B-208ENST00000490653 SNRPD2P62316 118 aaKnown RBP6.28□□□□□ -1.4
PRPF4B-208ENST00000490653 SELENOWP63302 87 aa6.28□□□□□ -1.4
PRPF4B-208ENST00000490653 VLDLRP98155 873 aa6.28□□□□□ -1.4
PRPF4B-208ENST00000490653 LIPEQ05469 1076 aa6.28□□□□□ -1.4
PRPF4B-208ENST00000490653 FMODQ06828 376 aa6.28□□□□□ -1.4
PRPF4B-208ENST00000490653 DBPQ10586 325 aaPredicted RBP6.28□□□□□ -1.4
PRPF4B-208ENST00000490653 FHL1Q13642 323 aa6.28□□□□□ -1.4
PRPF4B-208ENST00000490653 TRIP10Q15642 601 aa6.28□□□□□ -1.4
PRPF4B-208ENST00000490653 KCNMB1Q16558 191 aa6.28□□□□□ -1.4
PRPF4B-208ENST00000490653 FXNQ16595 210 aa6.28□□□□□ -1.4
PRPF4B-208ENST00000490653 MLANAQ16655 118 aa6.28□□□□□ -1.4
PRPF4B-208ENST00000490653 HIST3H3Q16695 136 aa6.28□□□□□ -1.4
PRPF4B-208ENST00000490653 COQ5Q5HYK3 327 aa6.28□□□□□ -1.4
PRPF4B-208ENST00000490653 TMEM255AQ5JRV8 349 aa6.28□□□□□ -1.4
PRPF4B-208ENST00000490653 ARMC4Q5T2S8 1044 aa6.28□□□□□ -1.4
PRPF4B-208ENST00000490653 INTS11Q5TA45 600 aaKnown RBP6.28□□□□□ -1.4
PRPF4B-208ENST00000490653 CYB5R2Q6BCY4 276 aa6.28□□□□□ -1.4
PRPF4B-208ENST00000490653 C8orf82Q6P1X6 216 aaPredicted RBP6.28□□□□□ -1.4
PRPF4B-208ENST00000490653 HIST3H2AQ7L7L0 130 aa6.28□□□□□ -1.4
PRPF4B-208ENST00000490653 LRRC18Q8N456 261 aa6.28□□□□□ -1.4
PRPF4B-208ENST00000490653 OR2T12Q8NG77 320 aa6.28□□□□□ -1.4
PRPF4B-208ENST00000490653 OR4K5Q8NGD3 323 aa6.28□□□□□ -1.4
PRPF4B-208ENST00000490653 NSMAFQ92636 917 aa6.28□□□□□ -1.4
PRPF4B-208ENST00000490653 GTF3AQ92664 365 aaKnown RBP6.28□□□□□ -1.4
PRPF4B-208ENST00000490653 HIST1H2ACQ93077 130 aa6.28□□□□□ -1.4
PRPF4B-208ENST00000490653 ZNF566Q969W8 418 aa6.28□□□□□ -1.4
PRPF4B-208ENST00000490653 NMD3Q96D46 503 aaKnown RBP6.28□□□□□ -1.4
PRPF4B-208ENST00000490653 MSI2Q96DH6 328 aaKnown RBP6.28□□□□□ -1.4
PRPF4B-208ENST00000490653 SLC25A44Q96H78 314 aaPredicted RBP6.28□□□□□ -1.4
PRPF4B-208ENST00000490653 SH3GL1Q99961 368 aa6.28□□□□□ -1.4
PRPF4B-208ENST00000490653 ELAC2Q9BQ52 826 aaKnown RBP6.28□□□□□ -1.4
PRPF4B-208ENST00000490653 BPESC1Q9GZL8 116 aa6.28□□□□□ -1.4
PRPF4B-208ENST00000490653 CCDC134Q9H6E4 229 aa6.28□□□□□ -1.4
PRPF4B-208ENST00000490653 ZNF442Q9H7R0 627 aa6.28□□□□□ -1.4
PRPF4B-208ENST00000490653 RNF121Q9H920 327 aa6.28□□□□□ -1.4
PRPF4B-208ENST00000490653 B3GAT2Q9NPZ5 323 aa6.28□□□□□ -1.4
PRPF4B-208ENST00000490653 MAN2C1Q9NTJ4 1040 aa6.28□□□□□ -1.4
PRPF4B-208ENST00000490653 TMEM38BQ9NVV0 291 aa6.28□□□□□ -1.4
PRPF4B-208ENST00000490653 GID8Q9NWU2 228 aa6.28□□□□□ -1.4
PRPF4B-208ENST00000490653 CMAHPQ9Y471 501 aa6.28□□□□□ -1.4
PRPF4B-208ENST00000490653 UGT2A1Q9Y4X1 527 aa6.28□□□□□ -1.4
PRPF4B-208ENST00000490653 CAPN7Q9Y6W3 813 aa6.28□□□□□ -1.4
PRPF4B-208ENST00000490653 TRAV27A0A087WT01 109 aa6.27□□□□□ -1.41
PRPF4B-208ENST00000490653 A0A087WUU8 490 aa6.27□□□□□ -1.41
PRPF4B-208ENST00000490653 BBIP1A8MTZ0 92 aa6.27□□□□□ -1.41
PRPF4B-208ENST00000490653 CXCR6O00574 342 aa6.27□□□□□ -1.41
PRPF4B-208ENST00000490653 PHF1O43189 567 aaPredicted RBP6.27□□□□□ -1.41
PRPF4B-208ENST00000490653 TLX2O43763 284 aaPredicted RBP6.27□□□□□ -1.41
PRPF4B-208ENST00000490653 MGRN1O60291 552 aa6.27□□□□□ -1.41
PRPF4B-208ENST00000490653 HPXP02790 462 aa6.27□□□□□ -1.41
PRPF4B-208ENST00000490653 SERPINA5P05154 406 aa6.27□□□□□ -1.41
PRPF4B-208ENST00000490653 GSTP1P09211 210 aaKnown RBP6.27□□□□□ -1.41
PRPF4B-208ENST00000490653 MMP7P09237 267 aaPredicted RBP6.27□□□□□ -1.41
PRPF4B-208ENST00000490653 NAT2P11245 290 aa6.27□□□□□ -1.41
PRPF4B-208ENST00000490653 IFI30P13284 250 aa6.27□□□□□ -1.41
PRPF4B-208ENST00000490653 DAOP14920 347 aa6.27□□□□□ -1.41
PRPF4B-208ENST00000490653 ZNF26P17031 533 aaPredicted RBP6.27□□□□□ -1.41
PRPF4B-208ENST00000490653 CFPP27918 469 aa6.27□□□□□ -1.41
PRPF4B-208ENST00000490653 GLRXP35754 106 aa6.27□□□□□ -1.41
PRPF4B-208ENST00000490653 GSK3BP49841 420 aa6.27□□□□□ -1.41
PRPF4B-208ENST00000490653 PPOXP50336 477 aa6.27□□□□□ -1.41
PRPF4B-208ENST00000490653 SLC7A2P52569 658 aa6.27□□□□□ -1.41
PRPF4B-208ENST00000490653 CLRN1P58418 232 aa6.27□□□□□ -1.41
PRPF4B-208ENST00000490653 CTXN1P60606 82 aa6.27□□□□□ -1.41
PRPF4B-208ENST00000490653 TOP3AQ13472 1001 aaPredicted RBP6.27□□□□□ -1.41
PRPF4B-208ENST00000490653 SGCAQ16586 387 aa6.27□□□□□ -1.41
PRPF4B-208ENST00000490653 IQCCQ4KMZ1 466 aa6.27□□□□□ -1.41
PRPF4B-208ENST00000490653 ELFN2Q5R3F8 820 aa6.27□□□□□ -1.41
PRPF4B-208ENST00000490653 C1QTNF12Q5T7M4 302 aa6.27□□□□□ -1.41
PRPF4B-208ENST00000490653 LCE5AQ5TCM9 118 aa6.27□□□□□ -1.41
PRPF4B-208ENST00000490653 ERICH5Q6P6B1 374 aa6.27□□□□□ -1.41
PRPF4B-208ENST00000490653 SLC25A47Q6Q0C1 308 aa6.27□□□□□ -1.41
PRPF4B-208ENST00000490653 PIWIL3Q7Z3Z3 882 aaKnown RBP6.27□□□□□ -1.41
PRPF4B-208ENST00000490653 NANOGNBQ7Z5D8 188 aa6.27□□□□□ -1.41
PRPF4B-208ENST00000490653 CCDC36Q8IYA8 594 aa6.27□□□□□ -1.41
PRPF4B-208ENST00000490653 PCYOX1LQ8NBM8 494 aa6.27□□□□□ -1.41
PRPF4B-208ENST00000490653 CPEB3Q8NE35 698 aaKnown RBP6.27□□□□□ -1.41
PRPF4B-208ENST00000490653 OR51A7Q8NH64 312 aa6.27□□□□□ -1.41
PRPF4B-208ENST00000490653 RP9Q8TA86 221 aaKnown RBP6.27□□□□□ -1.41
PRPF4B-208ENST00000490653 LIPHQ8WWY8 451 aa6.27□□□□□ -1.41
PRPF4B-208ENST00000490653 YIPF5Q969M3 257 aa6.27□□□□□ -1.41
PRPF4B-208ENST00000490653 MRPL24Q96A35 216 aaKnown RBP6.27□□□□□ -1.41
PRPF4B-208ENST00000490653 NABP1Q96AH0 204 aa6.27□□□□□ -1.41
PRPF4B-208ENST00000490653 SLC19A3Q9BZV2 496 aa6.27□□□□□ -1.41
PRPF4B-208ENST00000490653 RAB1BQ9H0U4 201 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms