RNA–Protein interactions for RNA: ENST00000489921.1

TNFRSF1B-202, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 3

Gene TNFRSF1B, Length 409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-202ENST00000489921 MAKP20794 623 aa16.57■□□□□ 0.24
TNFRSF1B-202ENST00000489921 LSP1P33241 339 aa16.57■□□□□ 0.24
TNFRSF1B-202ENST00000489921 KLF3P57682 345 aaPredicted RBP16.57■□□□□ 0.24
TNFRSF1B-202ENST00000489921 LMO4P61968 165 aa16.57■□□□□ 0.24
TNFRSF1B-202ENST00000489921 TBC1D28Q2M2D7 210 aa16.57■□□□□ 0.24
TNFRSF1B-202ENST00000489921 LRRC23Q53EV4 343 aaPredicted RBP16.57■□□□□ 0.24
TNFRSF1B-202ENST00000489921 PABPC1L2AQ5JQF8 200 aa16.57■□□□□ 0.24
TNFRSF1B-202ENST00000489921 MICU2Q8IYU8 434 aa16.57■□□□□ 0.24
TNFRSF1B-202ENST00000489921 CLDN22Q8N7P3 220 aa16.57■□□□□ 0.24
TNFRSF1B-202ENST00000489921 OR2T12Q8NG77 320 aa16.57■□□□□ 0.24
TNFRSF1B-202ENST00000489921 GTF3AQ92664 365 aaKnown RBP16.57■□□□□ 0.24
TNFRSF1B-202ENST00000489921 BPIFA2Q96DR5 249 aa16.57■□□□□ 0.24
TNFRSF1B-202ENST00000489921 POM121L2Q96KW2 1035 aa16.57■□□□□ 0.24
TNFRSF1B-202ENST00000489921 NARFLQ9H6Q4 476 aa16.57■□□□□ 0.24
TNFRSF1B-202ENST00000489921 HINT3Q9NQE9 182 aaKnown RBP16.57■□□□□ 0.24
TNFRSF1B-202ENST00000489921 MRGBPQ9NV56 204 aa16.57■□□□□ 0.24
TNFRSF1B-202ENST00000489921 ZNF446Q9NWS9 450 aa16.57■□□□□ 0.24
TNFRSF1B-202ENST00000489921 GID8Q9NWU2 228 aa16.57■□□□□ 0.24
TNFRSF1B-202ENST00000489921 ZNF346Q9UL40 294 aaKnown RBP16.57■□□□□ 0.24
TNFRSF1B-202ENST00000489921 NBEAL1Q6ZS30 2694 aa16.57■□□□□ 0.24
TNFRSF1B-202ENST00000489921 LOC100509620A0A075B734 347 aa16.56■□□□□ 0.24
TNFRSF1B-202ENST00000489921 IQCMA0A1B0GVH7 501 aa16.56■□□□□ 0.24
TNFRSF1B-202ENST00000489921 B4DSR2 109 aa16.56■□□□□ 0.24
TNFRSF1B-202ENST00000489921 FFAR1O14842 300 aa16.56■□□□□ 0.24
TNFRSF1B-202ENST00000489921 PTHP01270 115 aa16.56■□□□□ 0.24
TNFRSF1B-202ENST00000489921 LCKP06239 509 aa16.56■□□□□ 0.24
TNFRSF1B-202ENST00000489921 WNT5AP41221 380 aa16.56■□□□□ 0.24
TNFRSF1B-202ENST00000489921 RAD52P43351 418 aa16.56■□□□□ 0.24
TNFRSF1B-202ENST00000489921 CCL8P80075 99 aa16.56■□□□□ 0.24
TNFRSF1B-202ENST00000489921 MAPRE2Q15555 327 aa16.56■□□□□ 0.24
TNFRSF1B-202ENST00000489921 NKPD1Q17RQ9 610 aa16.56■□□□□ 0.24
TNFRSF1B-202ENST00000489921 UGT2A3Q6UWM9 527 aa16.56■□□□□ 0.24
TNFRSF1B-202ENST00000489921 HDDC2Q7Z4H3 204 aa16.56■□□□□ 0.24
TNFRSF1B-202ENST00000489921 VTCN1Q7Z7D3 282 aa16.56■□□□□ 0.24
TNFRSF1B-202ENST00000489921 MEX3DQ86XN8 651 aaKnown RBP16.56■□□□□ 0.24
TNFRSF1B-202ENST00000489921 ZNF101Q8IZC7 436 aa16.56■□□□□ 0.24
TNFRSF1B-202ENST00000489921 PCYOX1LQ8NBM8 494 aa16.56■□□□□ 0.24
TNFRSF1B-202ENST00000489921 OR1J2Q8NGS2 313 aa16.56■□□□□ 0.24
TNFRSF1B-202ENST00000489921 TPD52L3Q96J77 140 aa16.56■□□□□ 0.24
TNFRSF1B-202ENST00000489921 PRRC1Q96M27 445 aa16.56■□□□□ 0.24
TNFRSF1B-202ENST00000489921 TREM2Q9NZC2 230 aa16.56■□□□□ 0.24
TNFRSF1B-202ENST00000489921 ARMCX1Q9P291 453 aa16.56■□□□□ 0.24
TNFRSF1B-202ENST00000489921 ELOVL7A1L3X0 281 aa16.55■□□□□ 0.24
TNFRSF1B-202ENST00000489921 J3KTA2 159 aa16.55■□□□□ 0.24
TNFRSF1B-202ENST00000489921 IGHV3-13P01766 116 aa16.55■□□□□ 0.24
TNFRSF1B-202ENST00000489921 IGHMP01871 453 aa16.55■□□□□ 0.24
TNFRSF1B-202ENST00000489921 SAGP10523 405 aaPredicted RBP16.55■□□□□ 0.24
TNFRSF1B-202ENST00000489921 IFI30P13284 250 aa16.55■□□□□ 0.24
TNFRSF1B-202ENST00000489921 ZNF32P17041 273 aa16.55■□□□□ 0.24
TNFRSF1B-202ENST00000489921 STOMP27105 288 aa16.55■□□□□ 0.24
TNFRSF1B-202ENST00000489921 YAP1P46937 504 aaKnown RBP16.55■□□□□ 0.24
TNFRSF1B-202ENST00000489921 PSG4Q00888 419 aa16.55■□□□□ 0.24
TNFRSF1B-202ENST00000489921 PLP2Q04941 152 aa16.55■□□□□ 0.24
TNFRSF1B-202ENST00000489921 ST3GAL3Q11203 375 aa16.55■□□□□ 0.24
TNFRSF1B-202ENST00000489921 ALG10Q5BKT4 473 aa16.55■□□□□ 0.24
TNFRSF1B-202ENST00000489921 FAM27BQ5VT28 67 aa16.55■□□□□ 0.24
TNFRSF1B-202ENST00000489921 SLC15A3Q8IY34 581 aa16.55■□□□□ 0.24
TNFRSF1B-202ENST00000489921 POU5F2Q8N7G0 328 aa16.55■□□□□ 0.24
TNFRSF1B-202ENST00000489921 C11orf40Q8WZ69 217 aa16.55■□□□□ 0.24
TNFRSF1B-202ENST00000489921 NSMAFQ92636 917 aa16.55■□□□□ 0.24
TNFRSF1B-202ENST00000489921 RCN3Q96D15 328 aa16.55■□□□□ 0.24
TNFRSF1B-202ENST00000489921 BCL2L14Q9BZR8 327 aa16.55■□□□□ 0.24
TNFRSF1B-202ENST00000489921 NKIRAS2Q9NYR9 191 aa16.55■□□□□ 0.24
TNFRSF1B-202ENST00000489921 RHCGQ9UBD6 479 aa16.55■□□□□ 0.24
TNFRSF1B-202ENST00000489921 PPIHO43447 177 aaKnown RBP16.54■□□□□ 0.24
TNFRSF1B-202ENST00000489921 PRSS23O95084 383 aa16.54■□□□□ 0.24
TNFRSF1B-202ENST00000489921 GAAP10253 952 aa16.54■□□□□ 0.24
TNFRSF1B-202ENST00000489921 APLNRP35414 380 aa16.54■□□□□ 0.24
TNFRSF1B-202ENST00000489921 CRYBB2P43320 205 aa16.54■□□□□ 0.24
TNFRSF1B-202ENST00000489921 RPL27P61353 136 aaKnown RBP16.54■□□□□ 0.24
TNFRSF1B-202ENST00000489921 GUCY1A3Q02108 690 aa16.54■□□□□ 0.24
TNFRSF1B-202ENST00000489921 TAF11Q15544 211 aa16.54■□□□□ 0.24
TNFRSF1B-202ENST00000489921 SGCAQ16586 387 aa16.54■□□□□ 0.24
TNFRSF1B-202ENST00000489921 C8orf82Q6P1X6 216 aaPredicted RBP16.54■□□□□ 0.24
TNFRSF1B-202ENST00000489921 FOXL2NBQ6ZUU3 175 aa16.54■□□□□ 0.24
TNFRSF1B-202ENST00000489921 TSEN54Q7Z6J9 526 aaKnown RBP16.54■□□□□ 0.24
TNFRSF1B-202ENST00000489921 IGFN1Q86VF2 1251 aa16.54■□□□□ 0.24
TNFRSF1B-202ENST00000489921 AKR7LQ8NHP1 331 aa16.54■□□□□ 0.24
TNFRSF1B-202ENST00000489921 MARS2Q96GW9 593 aaKnown RBP16.54■□□□□ 0.24
TNFRSF1B-202ENST00000489921 WNT5BQ9H1J7 359 aa16.54■□□□□ 0.24
TNFRSF1B-202ENST00000489921 CCDC134Q9H6E4 229 aa16.54■□□□□ 0.24
TNFRSF1B-202ENST00000489921 SLCO1C1Q9NYB5 712 aa16.54■□□□□ 0.24
TNFRSF1B-202ENST00000489921 STX18Q9P2W9 335 aaKnown RBP16.54■□□□□ 0.24
TNFRSF1B-202ENST00000489921 HTR3EA5X5Y0 456 aa16.53■□□□□ 0.24
TNFRSF1B-202ENST00000489921 CDC14BO60729 498 aa16.53■□□□□ 0.24
TNFRSF1B-202ENST00000489921 TFP02787 698 aa16.53■□□□□ 0.24
TNFRSF1B-202ENST00000489921 SCG5P05408 212 aa16.53■□□□□ 0.24
TNFRSF1B-202ENST00000489921 VIMP08670 466 aaKnown RBP16.53■□□□□ 0.24
TNFRSF1B-202ENST00000489921 ZNF26P17031 533 aaPredicted RBP16.53■□□□□ 0.24
TNFRSF1B-202ENST00000489921 MPV17P39210 176 aa16.53■□□□□ 0.24
TNFRSF1B-202ENST00000489921 MMP15P51511 669 aa16.53■□□□□ 0.24
TNFRSF1B-202ENST00000489921 SELENOVP59797 346 aa16.53■□□□□ 0.24
TNFRSF1B-202ENST00000489921 ERVK-25P63136 954 aa16.53■□□□□ 0.24
TNFRSF1B-202ENST00000489921 HSF2Q03933 536 aa16.53■□□□□ 0.24
TNFRSF1B-202ENST00000489921 PRKCDQ05655 676 aa16.53■□□□□ 0.24
TNFRSF1B-202ENST00000489921 CD47Q08722 323 aa16.53■□□□□ 0.24
TNFRSF1B-202ENST00000489921 TOP3AQ13472 1001 aaPredicted RBP16.53■□□□□ 0.24
TNFRSF1B-202ENST00000489921 THEM4Q5T1C6 240 aa16.53■□□□□ 0.24
TNFRSF1B-202ENST00000489921 NRMQ8IXM6 262 aa16.53■□□□□ 0.24
TNFRSF1B-202ENST00000489921 OFCC1Q8IZS5 231 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms