RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 CDC20Q12834 499 aa5.71□□□□□ -1.5
SF3A3-208ENST00000489537 FOXF1Q12946 379 aa5.71□□□□□ -1.5
SF3A3-208ENST00000489537 HNRNPA0Q13151 305 aaKnown RBP5.71□□□□□ -1.5
SF3A3-208ENST00000489537 MYBPHQ13203 477 aa5.71□□□□□ -1.5
SF3A3-208ENST00000489537 ALKBH1Q13686 389 aaKnown RBP5.71□□□□□ -1.5
SF3A3-208ENST00000489537 OR7A5Q15622 319 aa5.71□□□□□ -1.5
SF3A3-208ENST00000489537 Q499Y3 187 aa5.71□□□□□ -1.5
SF3A3-208ENST00000489537 ACSM3Q53FZ2 586 aa5.71□□□□□ -1.5
SF3A3-208ENST00000489537 MESTQ5EB52 335 aa5.71□□□□□ -1.5
SF3A3-208ENST00000489537 ACER2Q5QJU3 275 aa5.71□□□□□ -1.5
SF3A3-208ENST00000489537 LINC01590Q5TEZ4 76 aa5.71□□□□□ -1.5
SF3A3-208ENST00000489537 MZT2BQ6NZ67 158 aa5.71□□□□□ -1.5
SF3A3-208ENST00000489537 POMZP3Q6PJE2 187 aa5.71□□□□□ -1.5
SF3A3-208ENST00000489537 ARL9Q6T311 187 aa5.71□□□□□ -1.5
SF3A3-208ENST00000489537 KLHL24Q6TFL4 600 aa5.71□□□□□ -1.5
SF3A3-208ENST00000489537 IL20RBQ6UXL0 311 aa5.71□□□□□ -1.5
SF3A3-208ENST00000489537 Q6ZNX1 250 aa5.71□□□□□ -1.5
SF3A3-208ENST00000489537 ESPNLQ6ZVH7 1005 aa5.71□□□□□ -1.5
SF3A3-208ENST00000489537 SLC35D2Q76EJ3 337 aa5.71□□□□□ -1.5
SF3A3-208ENST00000489537 PPP1R32Q7Z5V6 425 aa5.71□□□□□ -1.5
SF3A3-208ENST00000489537 CEACAM19Q7Z692 300 aa5.71□□□□□ -1.5
SF3A3-208ENST00000489537 KRT77Q7Z794 578 aa5.71□□□□□ -1.5
SF3A3-208ENST00000489537 IGFN1Q86VF2 1251 aa5.71□□□□□ -1.5
SF3A3-208ENST00000489537 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.71□□□□□ -1.5
SF3A3-208ENST00000489537 GLB1L2Q8IW92 636 aa5.71□□□□□ -1.5
SF3A3-208ENST00000489537 TIGD4Q8IY51 512 aa5.71□□□□□ -1.5
SF3A3-208ENST00000489537 MFSD4AQ8N468 514 aa5.71□□□□□ -1.5
SF3A3-208ENST00000489537 TMEM99Q8N816 258 aa5.71□□□□□ -1.5
SF3A3-208ENST00000489537 SYT14Q8NB59 555 aa5.71□□□□□ -1.5
SF3A3-208ENST00000489537 GALNT11Q8NCW6 608 aa5.71□□□□□ -1.5
SF3A3-208ENST00000489537 OR5AK2Q8NH90 309 aa5.71□□□□□ -1.5
SF3A3-208ENST00000489537 OTOSQ8NHW6 89 aa5.71□□□□□ -1.5
SF3A3-208ENST00000489537 ABHD4Q8TB40 342 aa5.71□□□□□ -1.5
SF3A3-208ENST00000489537 GPR148Q8TDV2 347 aa5.71□□□□□ -1.5
SF3A3-208ENST00000489537 CT55Q8WUE5 264 aa5.71□□□□□ -1.5
SF3A3-208ENST00000489537 ADAMTS14Q8WXS8 1223 aa5.71□□□□□ -1.5
SF3A3-208ENST00000489537 NSMAFQ92636 917 aa5.71□□□□□ -1.5
SF3A3-208ENST00000489537 GHSRQ92847 366 aa5.71□□□□□ -1.5
SF3A3-208ENST00000489537 TMEM203Q969S6 136 aa5.71□□□□□ -1.5
SF3A3-208ENST00000489537 RASD2Q96D21 266 aa5.71□□□□□ -1.5
SF3A3-208ENST00000489537 PELI1Q96FA3 418 aa5.71□□□□□ -1.5
SF3A3-208ENST00000489537 SLC25A44Q96H78 314 aaPredicted RBP5.71□□□□□ -1.5
SF3A3-208ENST00000489537 DIRAS2Q96HU8 199 aa5.71□□□□□ -1.5
SF3A3-208ENST00000489537 TMED9Q9BVK6 235 aa5.71□□□□□ -1.5
SF3A3-208ENST00000489537 SPRY4Q9C004 299 aa5.71□□□□□ -1.5
SF3A3-208ENST00000489537 RNF32Q9H0A6 362 aa5.71□□□□□ -1.5
SF3A3-208ENST00000489537 ENKD1Q9H0I2 346 aa5.71□□□□□ -1.5
SF3A3-208ENST00000489537 SYT4Q9H2B2 425 aa5.71□□□□□ -1.5
SF3A3-208ENST00000489537 CDCP1Q9H5V8 836 aa5.71□□□□□ -1.5
SF3A3-208ENST00000489537 MED20Q9H944 212 aa5.71□□□□□ -1.5
SF3A3-208ENST00000489537 NEK6Q9HC98 313 aa5.71□□□□□ -1.5
SF3A3-208ENST00000489537 ZNF160Q9HCG1 818 aa5.71□□□□□ -1.5
SF3A3-208ENST00000489537 SH2D2AQ9NP31 389 aa5.71□□□□□ -1.5
SF3A3-208ENST00000489537 B3GAT2Q9NPZ5 323 aa5.71□□□□□ -1.5
SF3A3-208ENST00000489537 P4HTMQ9NXG6 502 aa5.71□□□□□ -1.5
SF3A3-208ENST00000489537 CKLFQ9UBR5 152 aa5.71□□□□□ -1.5
SF3A3-208ENST00000489537 DAPK2Q9UIK4 370 aa5.71□□□□□ -1.5
SF3A3-208ENST00000489537 IKZF2Q9UKS7 526 aa5.71□□□□□ -1.5
SF3A3-208ENST00000489537 MSRB2Q9Y3D2 182 aa5.71□□□□□ -1.5
SF3A3-208ENST00000489537 KNTC1P50748 2209 aa5.71□□□□□ -1.5
SF3A3-208ENST00000489537 RP1P56715 2156 aa5.7□□□□□ -1.5
SF3A3-208ENST00000489537 ACACAQ13085 2346 aa5.7□□□□□ -1.5
SF3A3-208ENST00000489537 MGAQ8IWI9 3026 aa5.7□□□□□ -1.5
SF3A3-208ENST00000489537 FASNP49327 2511 aaKnown RBP5.7□□□□□ -1.5
SF3A3-208ENST00000489537 NPIPA2E9PIF3 369 aa5.7□□□□□ -1.5
SF3A3-208ENST00000489537 C11orf98E9PRG8 122 aa5.7□□□□□ -1.5
SF3A3-208ENST00000489537 NPIPA3F8WFD2 350 aa5.7□□□□□ -1.5
SF3A3-208ENST00000489537 KLRC4-KLRK1H3BQV0 150 aa5.7□□□□□ -1.5
SF3A3-208ENST00000489537 GPR171O14626 319 aa5.7□□□□□ -1.5
SF3A3-208ENST00000489537 SLC16A7O60669 478 aa5.7□□□□□ -1.5
SF3A3-208ENST00000489537 RAD1O60671 282 aa5.7□□□□□ -1.5
SF3A3-208ENST00000489537 SERPINI2O75830 405 aa5.7□□□□□ -1.5
SF3A3-208ENST00000489537 MRPL3P09001 348 aaKnown RBP5.7□□□□□ -1.5
SF3A3-208ENST00000489537 CNR1P21554 472 aa5.7□□□□□ -1.5
SF3A3-208ENST00000489537 APEX1P27695 318 aaKnown RBP5.7□□□□□ -1.5
SF3A3-208ENST00000489537 OTX2P32243 289 aa5.7□□□□□ -1.5
SF3A3-208ENST00000489537 TNFSF8P32971 234 aa5.7□□□□□ -1.5
SF3A3-208ENST00000489537 PTGDSP41222 190 aa5.7□□□□□ -1.5
SF3A3-208ENST00000489537 SOX8P57073 446 aa5.7□□□□□ -1.5
SF3A3-208ENST00000489537 OR2B6P58173 313 aa5.7□□□□□ -1.5
SF3A3-208ENST00000489537 OR12D2P58182 307 aa5.7□□□□□ -1.5
SF3A3-208ENST00000489537 CLRN1P58418 232 aa5.7□□□□□ -1.5
SF3A3-208ENST00000489537 RAC3P60763 192 aa5.7□□□□□ -1.5
SF3A3-208ENST00000489537 ADAM8P78325 824 aa5.7□□□□□ -1.5
SF3A3-208ENST00000489537 POU3F1Q03052 451 aaPredicted RBP5.7□□□□□ -1.5
SF3A3-208ENST00000489537 LTBQ06643 244 aa5.7□□□□□ -1.5
SF3A3-208ENST00000489537 SLC3A1Q07837 685 aa5.7□□□□□ -1.5
SF3A3-208ENST00000489537 OXA1LQ15070 435 aa5.7□□□□□ -1.5
SF3A3-208ENST00000489537 TAB1Q15750 504 aa5.7□□□□□ -1.5
SF3A3-208ENST00000489537 STK11Q15831 433 aa5.7□□□□□ -1.5
SF3A3-208ENST00000489537 PCK2Q16822 640 aa5.7□□□□□ -1.5
SF3A3-208ENST00000489537 HSD17B12Q53GQ0 312 aa5.7□□□□□ -1.5
SF3A3-208ENST00000489537 ZMAT1Q5H9K5 638 aa5.7□□□□□ -1.5
SF3A3-208ENST00000489537 TMEM244Q5VVB8 128 aa5.7□□□□□ -1.5
SF3A3-208ENST00000489537 LCN10Q6JVE6 187 aa5.7□□□□□ -1.5
SF3A3-208ENST00000489537 FAM199XQ6PEV8 388 aaPredicted RBP5.7□□□□□ -1.5
SF3A3-208ENST00000489537 UNQ9370/PRO34162Q6UXP9 181 aa5.7□□□□□ -1.5
SF3A3-208ENST00000489537 DCDC5Q6ZRR9 648 aa5.7□□□□□ -1.5
SF3A3-208ENST00000489537 SHISA5Q8N114 240 aa5.7□□□□□ -1.5
SF3A3-208ENST00000489537 OR6V1Q8N148 313 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms