RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 PIWIL3Q7Z3Z3 882 aaKnown RBP7.61□□□□□ -1.19
SSBP1-212ENST00000489378 LDLRAD3Q86YD5 345 aa7.61□□□□□ -1.19
SSBP1-212ENST00000489378 KLBQ86Z14 1044 aa7.61□□□□□ -1.19
SSBP1-212ENST00000489378 UEVLDQ8IX04 471 aa7.61□□□□□ -1.19
SSBP1-212ENST00000489378 RIMKLAQ8IXN7 391 aa7.61□□□□□ -1.19
SSBP1-212ENST00000489378 ZNF101Q8IZC7 436 aa7.61□□□□□ -1.19
SSBP1-212ENST00000489378 MUC20Q8N307 709 aaPredicted RBP7.61□□□□□ -1.19
SSBP1-212ENST00000489378 SLC22A24Q8N4F4 322 aa7.61□□□□□ -1.19
SSBP1-212ENST00000489378 CFHR4Q92496 578 aa7.61□□□□□ -1.19
SSBP1-212ENST00000489378 TAAR8Q969N4 342 aa7.61□□□□□ -1.19
SSBP1-212ENST00000489378 TBX15Q96SF7 602 aa7.61□□□□□ -1.19
SSBP1-212ENST00000489378 C1orf50Q9BV19 199 aa7.61□□□□□ -1.19
SSBP1-212ENST00000489378 CDADC1Q9BWV3 514 aa7.61□□□□□ -1.19
SSBP1-212ENST00000489378 DPY30Q9C005 99 aa7.61□□□□□ -1.19
SSBP1-212ENST00000489378 FN3KRPQ9HA64 309 aa7.61□□□□□ -1.19
SSBP1-212ENST00000489378 ACOXLQ9NUZ1 547 aa7.61□□□□□ -1.19
SSBP1-212ENST00000489378 ZNF180Q9UJW8 692 aa7.61□□□□□ -1.19
SSBP1-212ENST00000489378 ZDHHC8Q9ULC8 765 aa7.61□□□□□ -1.19
SSBP1-212ENST00000489378 UTP11Q9Y3A2 253 aaKnown RBP7.61□□□□□ -1.19
SSBP1-212ENST00000489378 DNAJC15Q9Y5T4 150 aa7.61□□□□□ -1.19
SSBP1-212ENST00000489378 SAR1BQ9Y6B6 198 aa7.61□□□□□ -1.19
SSBP1-212ENST00000489378 CDHR4A6H8M9 788 aa7.6□□□□□ -1.19
SSBP1-212ENST00000489378 TMEM233B4DJY2 109 aa7.6□□□□□ -1.19
SSBP1-212ENST00000489378 HMGN4O00479 90 aa7.6□□□□□ -1.19
SSBP1-212ENST00000489378 MYL2P10916 166 aa7.6□□□□□ -1.19
SSBP1-212ENST00000489378 ARRB2P32121 409 aa7.6□□□□□ -1.19
SSBP1-212ENST00000489378 CFHR2P36980 270 aa7.6□□□□□ -1.19
SSBP1-212ENST00000489378 WNT5AP41221 380 aa7.6□□□□□ -1.19
SSBP1-212ENST00000489378 COPZ1P61923 177 aa7.6□□□□□ -1.19
SSBP1-212ENST00000489378 NRN1LQ496H8 165 aa7.6□□□□□ -1.19
SSBP1-212ENST00000489378 KANK2Q63ZY3 851 aa7.6□□□□□ -1.19
SSBP1-212ENST00000489378 SLC35E4Q6ICL7 350 aa7.6□□□□□ -1.19
SSBP1-212ENST00000489378 OR4F3Q6IEY1 312 aa7.6□□□□□ -1.19
SSBP1-212ENST00000489378 TIFABQ6ZNK6 161 aa7.6□□□□□ -1.19
SSBP1-212ENST00000489378 RNF165Q6ZSG1 346 aa7.6□□□□□ -1.19
SSBP1-212ENST00000489378 SNX32Q86XE0 403 aa7.6□□□□□ -1.19
SSBP1-212ENST00000489378 VRK2Q86Y07 508 aa7.6□□□□□ -1.19
SSBP1-212ENST00000489378 ZNF440Q8IYI8 595 aa7.6□□□□□ -1.19
SSBP1-212ENST00000489378 OR4A15Q8NGL6 344 aa7.6□□□□□ -1.19
SSBP1-212ENST00000489378 OR1J2Q8NGS2 313 aa7.6□□□□□ -1.19
SSBP1-212ENST00000489378 SLC25A40Q8TBP6 338 aa7.6□□□□□ -1.19
SSBP1-212ENST00000489378 KLF14Q8TD94 323 aaPredicted RBP7.6□□□□□ -1.19
SSBP1-212ENST00000489378 GATAD2BQ8WXI9 593 aa7.6□□□□□ -1.19
SSBP1-212ENST00000489378 NAPGQ99747 312 aaPredicted RBP7.6□□□□□ -1.19
SSBP1-212ENST00000489378 OR2J1Q9GZK6 312 aa7.6□□□□□ -1.19
SSBP1-212ENST00000489378 MMP28Q9H239 520 aa7.6□□□□□ -1.19
SSBP1-212ENST00000489378 C1orf198Q9H425 327 aa7.6□□□□□ -1.19
SSBP1-212ENST00000489378 RNF121Q9H920 327 aa7.6□□□□□ -1.19
SSBP1-212ENST00000489378 TMEM165Q9HC07 324 aa7.6□□□□□ -1.19
SSBP1-212ENST00000489378 CYSLTR2Q9NS75 346 aa7.6□□□□□ -1.19
SSBP1-212ENST00000489378 ZDHHC18Q9NUE0 388 aa7.6□□□□□ -1.19
SSBP1-212ENST00000489378 PCDHGB5Q9Y5G0 923 aa7.6□□□□□ -1.19
SSBP1-212ENST00000489378 LYSTQ99698 3801 aa7.59□□□□□ -1.19
SSBP1-212ENST00000489378 C22orf46C9J442 243 aa7.59□□□□□ -1.19
SSBP1-212ENST00000489378 C3orf84H3BNL1 204 aa7.59□□□□□ -1.19
SSBP1-212ENST00000489378 TMEM178BH3BS89 294 aa7.59□□□□□ -1.19
SSBP1-212ENST00000489378 EREGO14944 169 aa7.59□□□□□ -1.19
SSBP1-212ENST00000489378 PEX11AO75192 247 aa7.59□□□□□ -1.19
SSBP1-212ENST00000489378 LYPLA1O75608 230 aaPredicted RBP7.59□□□□□ -1.19
SSBP1-212ENST00000489378 DBIP07108 87 aaKnown RBP7.59□□□□□ -1.19
SSBP1-212ENST00000489378 IGLL1P15814 213 aa7.59□□□□□ -1.19
SSBP1-212ENST00000489378 NCF2P19878 526 aaPredicted RBP7.59□□□□□ -1.19
SSBP1-212ENST00000489378 CCNOP22674 350 aa7.59□□□□□ -1.19
SSBP1-212ENST00000489378 CSNK1A1P48729 337 aa7.59□□□□□ -1.19
SSBP1-212ENST00000489378 CDK5R2Q13319 367 aa7.59□□□□□ -1.19
SSBP1-212ENST00000489378 GNA13Q14344 377 aa7.59□□□□□ -1.19
SSBP1-212ENST00000489378 XKR7Q5GH72 579 aa7.59□□□□□ -1.19
SSBP1-212ENST00000489378 IL23RQ5VWK5 629 aa7.59□□□□□ -1.19
SSBP1-212ENST00000489378 MBNL2Q5VZF2 373 aaKnown RBP7.59□□□□□ -1.19
SSBP1-212ENST00000489378 SLC27A4Q6P1M0 643 aa7.59□□□□□ -1.19
SSBP1-212ENST00000489378 TMEM53Q6P2H8 277 aa7.59□□□□□ -1.19
SSBP1-212ENST00000489378 ZNF836Q6ZNA1 936 aa7.59□□□□□ -1.19
SSBP1-212ENST00000489378 RFPL4BQ6ZWI9 263 aa7.59□□□□□ -1.19
SSBP1-212ENST00000489378 LCA5Q86VQ0 697 aa7.59□□□□□ -1.19
SSBP1-212ENST00000489378 ANKRD46Q86W74 232 aa7.59□□□□□ -1.19
SSBP1-212ENST00000489378 CCDC126Q96EE4 140 aa7.59□□□□□ -1.19
SSBP1-212ENST00000489378 NEIL1Q96FI4 390 aaPredicted RBP7.59□□□□□ -1.19
SSBP1-212ENST00000489378 SAMD8Q96LT4 415 aa7.59□□□□□ -1.19
SSBP1-212ENST00000489378 TRNT1Q96Q11 434 aaKnown RBP7.59□□□□□ -1.19
SSBP1-212ENST00000489378 B9D2Q9BPU9 175 aa7.59□□□□□ -1.19
SSBP1-212ENST00000489378 TRIM15Q9C019 465 aa7.59□□□□□ -1.19
SSBP1-212ENST00000489378 LRMDAQ9H2I8 198 aa7.59□□□□□ -1.19
SSBP1-212ENST00000489378 MTHFD2LQ9H903 347 aaPredicted RBP7.59□□□□□ -1.19
SSBP1-212ENST00000489378 TMEM38BQ9NVV0 291 aa7.59□□□□□ -1.19
SSBP1-212ENST00000489378 FBLN5Q9UBX5 448 aa7.59□□□□□ -1.19
SSBP1-212ENST00000489378 PCLOQ9Y6V0 5065 aa7.58□□□□□ -1.2
SSBP1-212ENST00000489378 IGKV1D-42A0A075B6H8 117 aa7.58□□□□□ -1.2
SSBP1-212ENST00000489378 A0A087WUJ7 227 aa7.58□□□□□ -1.2
SSBP1-212ENST00000489378 IGHV1-69DA0A0B4J2H0 117 aa7.58□□□□□ -1.2
SSBP1-212ENST00000489378 ZNF726A6NNF4 738 aa7.58□□□□□ -1.2
SSBP1-212ENST00000489378 P2RY10O00398 339 aa7.58□□□□□ -1.2
SSBP1-212ENST00000489378 NPHS1O60500 1241 aa7.58□□□□□ -1.2
SSBP1-212ENST00000489378 SERPINI2O75830 405 aa7.58□□□□□ -1.2
SSBP1-212ENST00000489378 CPSF4O95639 269 aaKnown RBP7.58□□□□□ -1.2
SSBP1-212ENST00000489378 IGHV1-69P01742 117 aa7.58□□□□□ -1.2
SSBP1-212ENST00000489378 MMP9P14780 707 aa7.58□□□□□ -1.2
SSBP1-212ENST00000489378 NQO1P15559 274 aaKnown RBP7.58□□□□□ -1.2
SSBP1-212ENST00000489378 PRPS1L1P21108 318 aa7.58□□□□□ -1.2
SSBP1-212ENST00000489378 GABRA5P31644 462 aa7.58□□□□□ -1.2
SSBP1-212ENST00000489378 LIPAP38571 399 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms