RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 SSX4O60224 188 aa12.37□□□□□ -0.43
BRCA1-218ENST00000489037 IGHV4-39P01824 125 aa12.37□□□□□ -0.43
BRCA1-218ENST00000489037 ERCC1P07992 297 aaPredicted RBP12.37□□□□□ -0.43
BRCA1-218ENST00000489037 NR4A1P22736 598 aa12.37□□□□□ -0.43
BRCA1-218ENST00000489037 THBS4P35443 961 aa12.37□□□□□ -0.43
BRCA1-218ENST00000489037 HGFACQ04756 655 aa12.37□□□□□ -0.43
BRCA1-218ENST00000489037 FMODQ06828 376 aa12.37□□□□□ -0.43
BRCA1-218ENST00000489037 FHL1Q13642 323 aa12.37□□□□□ -0.43
BRCA1-218ENST00000489037 TBC1D28Q2M2D7 210 aa12.37□□□□□ -0.43
BRCA1-218ENST00000489037 KRT80Q6KB66 452 aa12.37□□□□□ -0.43
BRCA1-218ENST00000489037 SMARCD3Q6STE5 483 aa12.37□□□□□ -0.43
BRCA1-218ENST00000489037 DPY19L2P2Q6ZN68 376 aa12.37□□□□□ -0.43
BRCA1-218ENST00000489037 MYPOPQ86VE0 399 aaPredicted RBP12.37□□□□□ -0.43
BRCA1-218ENST00000489037 GNPDA2Q8TDQ7 276 aa12.37□□□□□ -0.43
BRCA1-218ENST00000489037 CCDC124Q96CT7 223 aaKnown RBP12.37□□□□□ -0.43
BRCA1-218ENST00000489037 MS4A3Q96HJ5 214 aa12.37□□□□□ -0.43
BRCA1-218ENST00000489037 Q96M85 177 aa12.37□□□□□ -0.43
BRCA1-218ENST00000489037 DLL4Q9NR61 685 aa12.37□□□□□ -0.43
BRCA1-218ENST00000489037 ZNF224Q9NZL3 707 aa12.37□□□□□ -0.43
BRCA1-218ENST00000489037 GDF2Q9UK05 429 aaPredicted RBP12.37□□□□□ -0.43
BRCA1-218ENST00000489037 ADAM18Q9Y3Q7 739 aa12.37□□□□□ -0.43
BRCA1-218ENST00000489037 CMAHPQ9Y471 501 aa12.37□□□□□ -0.43
BRCA1-218ENST00000489037 FKBP7Q9Y680 259 aa12.37□□□□□ -0.43
BRCA1-218ENST00000489037 A0A1W2PPL8 197 aa12.36□□□□□ -0.43
BRCA1-218ENST00000489037 TRIM64A6NGJ6 449 aa12.36□□□□□ -0.43
BRCA1-218ENST00000489037 TRIM64BA6NI03 449 aa12.36□□□□□ -0.43
BRCA1-218ENST00000489037 SMAD7O15105 426 aaKnown RBP12.36□□□□□ -0.43
BRCA1-218ENST00000489037 UBOX5O94941 541 aa12.36□□□□□ -0.43
BRCA1-218ENST00000489037 ZNF35P13682 527 aa12.36□□□□□ -0.43
BRCA1-218ENST00000489037 SDHAP31040 664 aa12.36□□□□□ -0.43
BRCA1-218ENST00000489037 SLC6A6P31641 620 aa12.36□□□□□ -0.43
BRCA1-218ENST00000489037 CDAP32320 146 aa12.36□□□□□ -0.43
BRCA1-218ENST00000489037 APLNRP35414 380 aa12.36□□□□□ -0.43
BRCA1-218ENST00000489037 DSCR9P59020 149 aa12.36□□□□□ -0.43
BRCA1-218ENST00000489037 PCBD1P61457 104 aa12.36□□□□□ -0.43
BRCA1-218ENST00000489037 TRAP1Q12931 704 aaKnown RBP12.36□□□□□ -0.43
BRCA1-218ENST00000489037 KRR1Q13601 381 aaKnown RBP12.36□□□□□ -0.43
BRCA1-218ENST00000489037 EFNB3Q15768 340 aa12.36□□□□□ -0.43
BRCA1-218ENST00000489037 ADIPOQQ15848 244 aa12.36□□□□□ -0.43
BRCA1-218ENST00000489037 SWI5Q1ZZU3 235 aa12.36□□□□□ -0.43
BRCA1-218ENST00000489037 CLEC2AQ6UVW9 174 aa12.36□□□□□ -0.43
BRCA1-218ENST00000489037 ALDH16A1Q8IZ83 802 aa12.36□□□□□ -0.43
BRCA1-218ENST00000489037 SLC30A7Q8NEW0 376 aa12.36□□□□□ -0.43
BRCA1-218ENST00000489037 FGFBP3Q8TAT2 258 aa12.36□□□□□ -0.43
BRCA1-218ENST00000489037 FANK1Q8TC84 345 aa12.36□□□□□ -0.43
BRCA1-218ENST00000489037 HTRA1Q92743 480 aa12.36□□□□□ -0.43
BRCA1-218ENST00000489037 NMD3Q96D46 503 aaKnown RBP12.36□□□□□ -0.43
BRCA1-218ENST00000489037 ZNF75AQ96N20 296 aa12.36□□□□□ -0.43
BRCA1-218ENST00000489037 GPX7Q96SL4 187 aaPredicted RBP12.36□□□□□ -0.43
BRCA1-218ENST00000489037 VRK1Q99986 396 aaPredicted RBP12.36□□□□□ -0.43
BRCA1-218ENST00000489037 RHNO1Q9BSD3 238 aa12.36□□□□□ -0.43
BRCA1-218ENST00000489037 FUZQ9BT04 418 aa12.36□□□□□ -0.43
BRCA1-218ENST00000489037 PLK3Q9H4B4 646 aa12.36□□□□□ -0.43
BRCA1-218ENST00000489037 NRIP3Q9NQ35 241 aa12.36□□□□□ -0.43
BRCA1-218ENST00000489037 SLC7A8Q9UHI5 535 aa12.36□□□□□ -0.43
BRCA1-218ENST00000489037 UGT2A1Q9Y4X1 527 aa12.36□□□□□ -0.43
BRCA1-218ENST00000489037 IER3IP1Q9Y5U9 82 aa12.36□□□□□ -0.43
BRCA1-218ENST00000489037 MTORP42345 2549 aa12.35□□□□□ -0.43
BRCA1-218ENST00000489037 TEX13CA0A0J9YWL9 993 aa12.35□□□□□ -0.43
BRCA1-218ENST00000489037 TCRBV5S2A0A599 114 aa12.35□□□□□ -0.43
BRCA1-218ENST00000489037 PRSS37A4D1T9 235 aa12.35□□□□□ -0.43
BRCA1-218ENST00000489037 C12orf71A8MTZ7 269 aa12.35□□□□□ -0.43
BRCA1-218ENST00000489037 NDUFS7O75251 213 aa12.35□□□□□ -0.43
BRCA1-218ENST00000489037 HOXB6P17509 224 aaKnown RBP12.35□□□□□ -0.43
BRCA1-218ENST00000489037 MSR1P21757 451 aa12.35□□□□□ -0.43
BRCA1-218ENST00000489037 FPR3P25089 353 aa12.35□□□□□ -0.43
BRCA1-218ENST00000489037 GLRXP35754 106 aa12.35□□□□□ -0.43
BRCA1-218ENST00000489037 EFNA4P52798 201 aa12.35□□□□□ -0.43
BRCA1-218ENST00000489037 SELENOVP59797 346 aa12.35□□□□□ -0.43
BRCA1-218ENST00000489037 MS4A2Q01362 244 aa12.35□□□□□ -0.43
BRCA1-218ENST00000489037 TNK1Q13470 666 aa12.35□□□□□ -0.43
BRCA1-218ENST00000489037 FAM27BQ5VT28 67 aa12.35□□□□□ -0.43
BRCA1-218ENST00000489037 UNQ6126/PRO20091Q6UXV3 157 aa12.35□□□□□ -0.43
BRCA1-218ENST00000489037 FAM122BQ7Z309 247 aa12.35□□□□□ -0.43
BRCA1-218ENST00000489037 ZER1Q7Z7L7 766 aa12.35□□□□□ -0.43
BRCA1-218ENST00000489037 ADCK1Q86TW2 530 aa12.35□□□□□ -0.43
BRCA1-218ENST00000489037 CLDN22Q8N7P3 220 aa12.35□□□□□ -0.43
BRCA1-218ENST00000489037 CLPTM1LQ96KA5 538 aa12.35□□□□□ -0.43
BRCA1-218ENST00000489037 COX4I2Q96KJ9 171 aa12.35□□□□□ -0.43
BRCA1-218ENST00000489037 RAB1BQ9H0U4 201 aa12.35□□□□□ -0.43
BRCA1-218ENST00000489037 RERGLQ9H628 205 aa12.35□□□□□ -0.43
BRCA1-218ENST00000489037 REEP1Q9H902 201 aa12.35□□□□□ -0.43
BRCA1-218ENST00000489037 DYNLRB1Q9NP97 96 aa12.35□□□□□ -0.43
BRCA1-218ENST00000489037 IL20RAQ9UHF4 553 aa12.35□□□□□ -0.43
BRCA1-218ENST00000489037 CHD3Q12873 2000 aaKnown RBP12.34□□□□□ -0.43
BRCA1-218ENST00000489037 IGKV1D-43A0A0B4J1Z2 117 aa12.34□□□□□ -0.43
BRCA1-218ENST00000489037 H7C1C5 153 aa12.34□□□□□ -0.43
BRCA1-218ENST00000489037 SOCS2O14508 198 aa12.34□□□□□ -0.43
BRCA1-218ENST00000489037 IMPA2O14732 288 aa12.34□□□□□ -0.43
BRCA1-218ENST00000489037 KHDRBS3O75525 346 aaKnown RBP12.34□□□□□ -0.43
BRCA1-218ENST00000489037 CCNB2O95067 398 aa12.34□□□□□ -0.43
BRCA1-218ENST00000489037 CST2P09228 141 aa12.34□□□□□ -0.43
BRCA1-218ENST00000489037 CSF3P09919 207 aa12.34□□□□□ -0.43
BRCA1-218ENST00000489037 RAP2AP10114 183 aa12.34□□□□□ -0.43
BRCA1-218ENST00000489037 APEHP13798 732 aaKnown RBP12.34□□□□□ -0.43
BRCA1-218ENST00000489037 ZNF26P17031 533 aaPredicted RBP12.34□□□□□ -0.43
BRCA1-218ENST00000489037 LAP3P28838 519 aa12.34□□□□□ -0.43
BRCA1-218ENST00000489037 NOS3P29474 1203 aa12.34□□□□□ -0.43
BRCA1-218ENST00000489037 RAD52P43351 418 aa12.34□□□□□ -0.43
BRCA1-218ENST00000489037 MAGEA2P43356 314 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms