RNA–Protein interactions for RNA: ENST00000488927.2

HDAC7-224, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-224ENST00000488927 FAM221AA4D161 298 aa13.95□□□□□ -0.18
HDAC7-224ENST00000488927 EI24O14681 340 aa13.95□□□□□ -0.18
HDAC7-224ENST00000488927 CTLA4P16410 223 aa13.95□□□□□ -0.18
HDAC7-224ENST00000488927 MSR1P21757 451 aa13.95□□□□□ -0.18
HDAC7-224ENST00000488927 PAICSP22234 425 aaKnown RBP13.95□□□□□ -0.18
HDAC7-224ENST00000488927 PTAFRP25105 342 aa13.95□□□□□ -0.18
HDAC7-224ENST00000488927 LAP3P28838 519 aa13.95□□□□□ -0.18
HDAC7-224ENST00000488927 TLE4Q04727 773 aa13.95□□□□□ -0.18
HDAC7-224ENST00000488927 GLO1Q04760 184 aa13.95□□□□□ -0.18
HDAC7-224ENST00000488927 PTGES3Q15185 160 aaKnown RBP13.95□□□□□ -0.18
HDAC7-224ENST00000488927 GSG1Q2KHT4 349 aa13.95□□□□□ -0.18
HDAC7-224ENST00000488927 FAM27BQ5VT28 67 aa13.95□□□□□ -0.18
HDAC7-224ENST00000488927 FBXW10Q5XX13 1052 aa13.95□□□□□ -0.18
HDAC7-224ENST00000488927 ZBTB49Q6ZSB9 765 aa13.95□□□□□ -0.18
HDAC7-224ENST00000488927 SLC16A14Q7RTX9 510 aa13.95□□□□□ -0.18
HDAC7-224ENST00000488927 ZBTB46Q86UZ6 589 aa13.95□□□□□ -0.18
HDAC7-224ENST00000488927 GLB1L2Q8IW92 636 aa13.95□□□□□ -0.18
HDAC7-224ENST00000488927 ZNF295-AS1Q8N0V1 137 aa13.95□□□□□ -0.18
HDAC7-224ENST00000488927 CBR4Q8N4T8 237 aa13.95□□□□□ -0.18
HDAC7-224ENST00000488927 IQCF1Q8N6M8 205 aa13.95□□□□□ -0.18
HDAC7-224ENST00000488927 SLC37A3Q8NCC5 494 aa13.95□□□□□ -0.18
HDAC7-224ENST00000488927 OR2T4Q8NH00 348 aa13.95□□□□□ -0.18
HDAC7-224ENST00000488927 PLEKHA8Q96JA3 519 aa13.95□□□□□ -0.18
HDAC7-224ENST00000488927 GABARAPL3Q9BY60 117 aa13.95□□□□□ -0.18
HDAC7-224ENST00000488927 SEC61A2Q9H9S3 476 aa13.95□□□□□ -0.18
HDAC7-224ENST00000488927 RPRD1BQ9NQG5 326 aaKnown RBP13.95□□□□□ -0.18
HDAC7-224ENST00000488927 TMEFF2Q9UIK5 374 aaPredicted RBP13.95□□□□□ -0.18
HDAC7-224ENST00000488927 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.94□□□□□ -0.18
HDAC7-224ENST00000488927 A0A1W2PR80 420 aa13.94□□□□□ -0.18
HDAC7-224ENST00000488927 OR6C68A6NDL8 312 aa13.94□□□□□ -0.18
HDAC7-224ENST00000488927 DEFB108AA8MXU0 73 aa13.94□□□□□ -0.18
HDAC7-224ENST00000488927 MITFO75030 526 aaPredicted RBP13.94□□□□□ -0.18
HDAC7-224ENST00000488927 CTAG2O75638 210 aa13.94□□□□□ -0.18
HDAC7-224ENST00000488927 CD79AP11912 226 aa13.94□□□□□ -0.18
HDAC7-224ENST00000488927 CBR1P16152 277 aa13.94□□□□□ -0.18
HDAC7-224ENST00000488927 CDAP32320 146 aa13.94□□□□□ -0.18
HDAC7-224ENST00000488927 PTDSS1P48651 473 aaKnown RBP13.94□□□□□ -0.18
HDAC7-224ENST00000488927 CENPAP49450 140 aa13.94□□□□□ -0.18
HDAC7-224ENST00000488927 SLC25A1P53007 311 aa13.94□□□□□ -0.18
HDAC7-224ENST00000488927 PCBD1P61457 104 aa13.94□□□□□ -0.18
HDAC7-224ENST00000488927 NPRL3Q12980 569 aa13.94□□□□□ -0.18
HDAC7-224ENST00000488927 SGCAQ16586 387 aa13.94□□□□□ -0.18
HDAC7-224ENST00000488927 ZNF362Q5T0B9 420 aaPredicted RBP13.94□□□□□ -0.18
HDAC7-224ENST00000488927 HIST2H2BCQ6DN03 193 aa13.94□□□□□ -0.18
HDAC7-224ENST00000488927 ACSM5Q6NUN0 579 aa13.94□□□□□ -0.18
HDAC7-224ENST00000488927 TMEM53Q6P2H8 277 aa13.94□□□□□ -0.18
HDAC7-224ENST00000488927 SEZ6L2Q6UXD5 910 aa13.94□□□□□ -0.18
HDAC7-224ENST00000488927 SKA3Q8IX90 412 aa13.94□□□□□ -0.18
HDAC7-224ENST00000488927 OR6V1Q8N148 313 aa13.94□□□□□ -0.18
HDAC7-224ENST00000488927 NABP1Q96AH0 204 aa13.94□□□□□ -0.18
HDAC7-224ENST00000488927 RADILQ96JH8 1075 aa13.94□□□□□ -0.18
HDAC7-224ENST00000488927 DDOQ99489 341 aa13.94□□□□□ -0.18
HDAC7-224ENST00000488927 RERGLQ9H628 205 aa13.94□□□□□ -0.18
HDAC7-224ENST00000488927 SRA1Q9HD15 236 aaKnown RBP13.94□□□□□ -0.18
HDAC7-224ENST00000488927 POLE4Q9NR33 117 aa13.94□□□□□ -0.18
HDAC7-224ENST00000488927 RASSF1Q9NS23 344 aa13.94□□□□□ -0.18
HDAC7-224ENST00000488927 B3GNT2Q9NY97 397 aa13.94□□□□□ -0.18
HDAC7-224ENST00000488927 CRNNQ9UBG3 495 aaPredicted RBP13.94□□□□□ -0.18
HDAC7-224ENST00000488927 B9D1Q9UPM9 204 aa13.94□□□□□ -0.18
HDAC7-224ENST00000488927 ASH1LQ9NR48 2969 aaKnown RBP13.94□□□□□ -0.18
HDAC7-224ENST00000488927 IGLV1-36A0A0B4J1U3 117 aa13.93□□□□□ -0.18
HDAC7-224ENST00000488927 C12orf71A8MTZ7 269 aa13.93□□□□□ -0.18
HDAC7-224ENST00000488927 SURF4O15260 269 aa13.93□□□□□ -0.18
HDAC7-224ENST00000488927 RRP9O43818 475 aaKnown RBP13.93□□□□□ -0.18
HDAC7-224ENST00000488927 RAB36O95755 333 aa13.93□□□□□ -0.18
HDAC7-224ENST00000488927 IGKV3-15P01624 115 aa13.93□□□□□ -0.18
HDAC7-224ENST00000488927 HLA-HP01893 362 aa13.93□□□□□ -0.18
HDAC7-224ENST00000488927 HRGP04196 525 aa13.93□□□□□ -0.18
HDAC7-224ENST00000488927 CST2P09228 141 aa13.93□□□□□ -0.18
HDAC7-224ENST00000488927 ZNF83P51522 516 aa13.93□□□□□ -0.18
HDAC7-224ENST00000488927 BLVRAP53004 296 aa13.93□□□□□ -0.18
HDAC7-224ENST00000488927 LSM6P62312 80 aaKnown RBP13.93□□□□□ -0.18
HDAC7-224ENST00000488927 CRMP1Q14194 572 aa13.93□□□□□ -0.18
HDAC7-224ENST00000488927 ETFDHQ16134 617 aa13.93□□□□□ -0.18
HDAC7-224ENST00000488927 NCMAPQ5T1S8 102 aa13.93□□□□□ -0.18
HDAC7-224ENST00000488927 SYT9Q86SS6 491 aa13.93□□□□□ -0.18
HDAC7-224ENST00000488927 CYB561A3Q8NBI2 242 aa13.93□□□□□ -0.18
HDAC7-224ENST00000488927 PIK3IP1Q96FE7 263 aa13.93□□□□□ -0.18
HDAC7-224ENST00000488927 PLPPR2Q96GM1 343 aa13.93□□□□□ -0.18
HDAC7-224ENST00000488927 SH3GL3Q99963 347 aa13.93□□□□□ -0.18
HDAC7-224ENST00000488927 CCNB1IP1Q9NPC3 277 aa13.93□□□□□ -0.18
HDAC7-224ENST00000488927 NPAP1Q9NZP6 1156 aa13.93□□□□□ -0.18
HDAC7-224ENST00000488927 COA3Q9Y2R0 106 aaPredicted RBP13.93□□□□□ -0.18
HDAC7-224ENST00000488927 PKDREJQ9NTG1 2253 aa13.93□□□□□ -0.18
HDAC7-224ENST00000488927 ZAR1LA6NP61 321 aa13.92□□□□□ -0.18
HDAC7-224ENST00000488927 M0R1B8 84 aa13.92□□□□□ -0.18
HDAC7-224ENST00000488927 PTHP01270 115 aa13.92□□□□□ -0.18
HDAC7-224ENST00000488927 IGLV1-44P01699 117 aa13.92□□□□□ -0.18
HDAC7-224ENST00000488927 CD3EP07766 207 aa13.92□□□□□ -0.18
HDAC7-224ENST00000488927 RAB1AP62820 205 aa13.92□□□□□ -0.18
HDAC7-224ENST00000488927 TUBA1BP68363 451 aa13.92□□□□□ -0.18
HDAC7-224ENST00000488927 TUBA4AP68366 448 aa13.92□□□□□ -0.18
HDAC7-224ENST00000488927 TRIP10Q15642 601 aa13.92□□□□□ -0.18
HDAC7-224ENST00000488927 SNAPC1Q16533 368 aa13.92□□□□□ -0.18
HDAC7-224ENST00000488927 KCNMB1Q16558 191 aa13.92□□□□□ -0.18
HDAC7-224ENST00000488927 SLX4IPQ5VYV7 408 aa13.92□□□□□ -0.18
HDAC7-224ENST00000488927 TMEM236Q5W0B7 351 aa13.92□□□□□ -0.18
HDAC7-224ENST00000488927 TUBA1AQ71U36 451 aa13.92□□□□□ -0.18
HDAC7-224ENST00000488927 MDP1Q86V88 176 aa13.92□□□□□ -0.18
HDAC7-224ENST00000488927 TMEM200AQ86VY9 491 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms