RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 TP53P04637 393 aaPredicted RBP13.76□□□□□ -0.21
C9orf3-219ENST00000488186 ZNF3P17036 446 aa13.76□□□□□ -0.21
C9orf3-219ENST00000488186 PAICSP22234 425 aaKnown RBP13.76□□□□□ -0.21
C9orf3-219ENST00000488186 GRK5P34947 590 aa13.76□□□□□ -0.21
C9orf3-219ENST00000488186 TUBA1BP68363 451 aa13.76□□□□□ -0.21
C9orf3-219ENST00000488186 TUBA4AP68366 448 aa13.76□□□□□ -0.21
C9orf3-219ENST00000488186 ELF3P78545 371 aaPredicted RBP13.76□□□□□ -0.21
C9orf3-219ENST00000488186 MRPS34P82930 218 aaKnown RBP13.76□□□□□ -0.21
C9orf3-219ENST00000488186 PIGFQ07326 219 aa13.76□□□□□ -0.21
C9orf3-219ENST00000488186 RCN1Q15293 331 aa13.76□□□□□ -0.21
C9orf3-219ENST00000488186 SLC36A2Q495M3 483 aa13.76□□□□□ -0.21
C9orf3-219ENST00000488186 KDM4DQ6B0I6 523 aa13.76□□□□□ -0.21
C9orf3-219ENST00000488186 TMEM53Q6P2H8 277 aa13.76□□□□□ -0.21
C9orf3-219ENST00000488186 TMEM108Q6UXF1 575 aa13.76□□□□□ -0.21
C9orf3-219ENST00000488186 ZBTB49Q6ZSB9 765 aa13.76□□□□□ -0.21
C9orf3-219ENST00000488186 TUBA1AQ71U36 451 aa13.76□□□□□ -0.21
C9orf3-219ENST00000488186 ZNF627Q7L945 461 aa13.76□□□□□ -0.21
C9orf3-219ENST00000488186 DPPA2Q7Z7J5 298 aa13.76□□□□□ -0.21
C9orf3-219ENST00000488186 PARP8Q8N3A8 854 aa13.76□□□□□ -0.21
C9orf3-219ENST00000488186 LRRC18Q8N456 261 aa13.76□□□□□ -0.21
C9orf3-219ENST00000488186 OR4Q3Q8NH05 313 aa13.76□□□□□ -0.21
C9orf3-219ENST00000488186 NMD3Q96D46 503 aaKnown RBP13.76□□□□□ -0.21
C9orf3-219ENST00000488186 SLC38A2Q96QD8 506 aa13.76□□□□□ -0.21
C9orf3-219ENST00000488186 SH3GL3Q99963 347 aa13.76□□□□□ -0.21
C9orf3-219ENST00000488186 KCNS3Q9BQ31 491 aa13.76□□□□□ -0.21
C9orf3-219ENST00000488186 PRRG3Q9BZD7 231 aa13.76□□□□□ -0.21
C9orf3-219ENST00000488186 NUAK2Q9H093 628 aa13.76□□□□□ -0.21
C9orf3-219ENST00000488186 CCNB1IP1Q9NPC3 277 aa13.76□□□□□ -0.21
C9orf3-219ENST00000488186 RPRD1BQ9NQG5 326 aaKnown RBP13.76□□□□□ -0.21
C9orf3-219ENST00000488186 COA3Q9Y2R0 106 aaPredicted RBP13.76□□□□□ -0.21
C9orf3-219ENST00000488186 TACC2O95359 2948 aa13.76□□□□□ -0.21
C9orf3-219ENST00000488186 IGKV1D-43A0A0B4J1Z2 117 aa13.75□□□□□ -0.21
C9orf3-219ENST00000488186 MITFO75030 526 aaPredicted RBP13.75□□□□□ -0.21
C9orf3-219ENST00000488186 RAB36O95755 333 aa13.75□□□□□ -0.21
C9orf3-219ENST00000488186 HLA-HP01893 362 aa13.75□□□□□ -0.21
C9orf3-219ENST00000488186 HLA-DQA2P01906 255 aa13.75□□□□□ -0.21
C9orf3-219ENST00000488186 CD3EP07766 207 aa13.75□□□□□ -0.21
C9orf3-219ENST00000488186 CTLA4P16410 223 aa13.75□□□□□ -0.21
C9orf3-219ENST00000488186 LAP3P28838 519 aa13.75□□□□□ -0.21
C9orf3-219ENST00000488186 RAD23AP54725 363 aa13.75□□□□□ -0.21
C9orf3-219ENST00000488186 CDK5Q00535 292 aa13.75□□□□□ -0.21
C9orf3-219ENST00000488186 DAG1Q14118 895 aa13.75□□□□□ -0.21
C9orf3-219ENST00000488186 ETFDHQ16134 617 aa13.75□□□□□ -0.21
C9orf3-219ENST00000488186 NRN1LQ496H8 165 aa13.75□□□□□ -0.21
C9orf3-219ENST00000488186 GLB1L2Q8IW92 636 aa13.75□□□□□ -0.21
C9orf3-219ENST00000488186 SKA3Q8IX90 412 aa13.75□□□□□ -0.21
C9orf3-219ENST00000488186 DEPDC4Q8N2C3 294 aa13.75□□□□□ -0.21
C9orf3-219ENST00000488186 CBR4Q8N4T8 237 aa13.75□□□□□ -0.21
C9orf3-219ENST00000488186 CYB561A3Q8NBI2 242 aa13.75□□□□□ -0.21
C9orf3-219ENST00000488186 SLC37A3Q8NCC5 494 aa13.75□□□□□ -0.21
C9orf3-219ENST00000488186 NELFAQ9H3P2 528 aa13.75□□□□□ -0.21
C9orf3-219ENST00000488186 RIBC2Q9H4K1 309 aa13.75□□□□□ -0.21
C9orf3-219ENST00000488186 B9D1Q9UPM9 204 aa13.75□□□□□ -0.21
C9orf3-219ENST00000488186 SPG11Q96JI7 2443 aa13.74□□□□□ -0.21
C9orf3-219ENST00000488186 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.74□□□□□ -0.21
C9orf3-219ENST00000488186 OR6C68A6NDL8 312 aa13.74□□□□□ -0.21
C9orf3-219ENST00000488186 EI24O14681 340 aa13.74□□□□□ -0.21
C9orf3-219ENST00000488186 ANPEPP15144 967 aa13.74□□□□□ -0.21
C9orf3-219ENST00000488186 CBR1P16152 277 aa13.74□□□□□ -0.21
C9orf3-219ENST00000488186 MSR1P21757 451 aa13.74□□□□□ -0.21
C9orf3-219ENST00000488186 PTAFRP25105 342 aa13.74□□□□□ -0.21
C9orf3-219ENST00000488186 ARR3P36575 388 aa13.74□□□□□ -0.21
C9orf3-219ENST00000488186 PTDSS1P48651 473 aaKnown RBP13.74□□□□□ -0.21
C9orf3-219ENST00000488186 ALDH3A2P51648 485 aa13.74□□□□□ -0.21
C9orf3-219ENST00000488186 PCBD1P61457 104 aa13.74□□□□□ -0.21
C9orf3-219ENST00000488186 RAB1AP62820 205 aa13.74□□□□□ -0.21
C9orf3-219ENST00000488186 PLP2Q04941 152 aa13.74□□□□□ -0.21
C9orf3-219ENST00000488186 NPRL3Q12980 569 aa13.74□□□□□ -0.21
C9orf3-219ENST00000488186 PTGES3Q15185 160 aaKnown RBP13.74□□□□□ -0.21
C9orf3-219ENST00000488186 SNAPC1Q16533 368 aa13.74□□□□□ -0.21
C9orf3-219ENST00000488186 GSG1Q2KHT4 349 aa13.74□□□□□ -0.21
C9orf3-219ENST00000488186 TMEM236Q5W0B7 351 aa13.74□□□□□ -0.21
C9orf3-219ENST00000488186 ACSM5Q6NUN0 579 aa13.74□□□□□ -0.21
C9orf3-219ENST00000488186 MDP1Q86V88 176 aa13.74□□□□□ -0.21
C9orf3-219ENST00000488186 NPEPL1Q8NDH3 523 aa13.74□□□□□ -0.21
C9orf3-219ENST00000488186 PROKR2Q8NFJ6 384 aa13.74□□□□□ -0.21
C9orf3-219ENST00000488186 OR2T4Q8NH00 348 aa13.74□□□□□ -0.21
C9orf3-219ENST00000488186 HTRA1Q92743 480 aa13.74□□□□□ -0.21
C9orf3-219ENST00000488186 FOXN4Q96NZ1 517 aa13.74□□□□□ -0.21
C9orf3-219ENST00000488186 TSSK2Q96PF2 358 aa13.74□□□□□ -0.21
C9orf3-219ENST00000488186 CLEC4MQ9H2X3 399 aaPredicted RBP13.74□□□□□ -0.21
C9orf3-219ENST00000488186 FN3KQ9H479 309 aa13.74□□□□□ -0.21
C9orf3-219ENST00000488186 DCLRE1BQ9H816 532 aa13.74□□□□□ -0.21
C9orf3-219ENST00000488186 CMC2Q9NRP2 79 aa13.74□□□□□ -0.21
C9orf3-219ENST00000488186 RASSF1Q9NS23 344 aa13.74□□□□□ -0.21
C9orf3-219ENST00000488186 TVP23BQ9NYZ1 205 aa13.74□□□□□ -0.21
C9orf3-219ENST00000488186 FKBP7Q9Y680 259 aa13.74□□□□□ -0.21
C9orf3-219ENST00000488186 FBN2P35556 2912 aa13.74□□□□□ -0.21
C9orf3-219ENST00000488186 FAM171A2A8MVW0 826 aa13.73□□□□□ -0.21
C9orf3-219ENST00000488186 PRR23D1E9PI22 279 aaPredicted RBP13.73□□□□□ -0.21
C9orf3-219ENST00000488186 CTAG2O75638 210 aa13.73□□□□□ -0.21
C9orf3-219ENST00000488186 PRR23D2P0DMB1 279 aaPredicted RBP13.73□□□□□ -0.21
C9orf3-219ENST00000488186 PPP2R2BQ00005 443 aa13.73□□□□□ -0.21
C9orf3-219ENST00000488186 GLO1Q04760 184 aa13.73□□□□□ -0.21
C9orf3-219ENST00000488186 BSPH1Q075Z2 132 aa13.73□□□□□ -0.21
C9orf3-219ENST00000488186 CRMP1Q14194 572 aa13.73□□□□□ -0.21
C9orf3-219ENST00000488186 TRIP10Q15642 601 aa13.73□□□□□ -0.21
C9orf3-219ENST00000488186 NCMAPQ5T1S8 102 aa13.73□□□□□ -0.21
C9orf3-219ENST00000488186 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.73□□□□□ -0.21
C9orf3-219ENST00000488186 OR6V1Q8N148 313 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms