RNA–Protein interactions for RNA: ENST00000488117.5

C9orf72-205, Transcript of chromosome 9 open reading frame 72, humanhuman

TSL 2

Gene C9orf72, Length 4,808 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-205ENST00000488117 MED11Q9P086 117 aa2.39□□□□□ -2.03
C9orf72-205ENST00000488117 MGAT4CQ9UBM8 478 aa2.39□□□□□ -2.03
C9orf72-205ENST00000488117 MRM2Q9UI43 246 aaKnown RBP2.39□□□□□ -2.03
C9orf72-205ENST00000488117 OR52A1Q9UKL2 312 aa2.39□□□□□ -2.03
C9orf72-205ENST00000488117 ZMIZ1Q9ULJ6 1067 aa2.39□□□□□ -2.03
C9orf72-205ENST00000488117 PLEKHA6Q9Y2H5 1048 aa2.39□□□□□ -2.03
C9orf72-205ENST00000488117 COA3Q9Y2R0 106 aaPredicted RBP2.39□□□□□ -2.03
C9orf72-205ENST00000488117 WDFY4Q6ZS81 3184 aa2.39□□□□□ -2.03
C9orf72-205ENST00000488117 TRAV18A0A075B6X5 111 aa2.39□□□□□ -2.03
C9orf72-205ENST00000488117 IGHV3-20A0A0C4DH32 117 aa2.39□□□□□ -2.03
C9orf72-205ENST00000488117 TMEM269A0A1B0GVZ9 245 aa2.39□□□□□ -2.03
C9orf72-205ENST00000488117 H3BML4 177 aa2.39□□□□□ -2.03
C9orf72-205ENST00000488117 SULT1C2O00338 296 aa2.39□□□□□ -2.03
C9orf72-205ENST00000488117 ARPC1BO15143 372 aaKnown RBP2.39□□□□□ -2.03
C9orf72-205ENST00000488117 SYT7O43581 403 aa2.39□□□□□ -2.03
C9orf72-205ENST00000488117 PRKNO60260 465 aaPredicted RBP2.39□□□□□ -2.03
C9orf72-205ENST00000488117 FADS1O60427 444 aa2.39□□□□□ -2.03
C9orf72-205ENST00000488117 AKR7A3O95154 331 aa2.39□□□□□ -2.03
C9orf72-205ENST00000488117 IFNGR1P15260 489 aa2.39□□□□□ -2.03
C9orf72-205ENST00000488117 TCEA1P23193 301 aaKnown RBP2.39□□□□□ -2.03
C9orf72-205ENST00000488117 DNASE1P24855 282 aa2.39□□□□□ -2.03
C9orf72-205ENST00000488117 CDK2P24941 298 aa2.39□□□□□ -2.03
C9orf72-205ENST00000488117 CASRP41180 1078 aa2.39□□□□□ -2.03
C9orf72-205ENST00000488117 EIF1AXP47813 144 aaKnown RBP2.39□□□□□ -2.03
C9orf72-205ENST00000488117 SSR4P51571 173 aa2.39□□□□□ -2.03
C9orf72-205ENST00000488117 BIDP55957 195 aa2.39□□□□□ -2.03
C9orf72-205ENST00000488117 TAS2R20P59543 309 aa2.39□□□□□ -2.03
C9orf72-205ENST00000488117 SNTA1Q13424 505 aa2.39□□□□□ -2.03
C9orf72-205ENST00000488117 IL11RAQ14626 422 aa2.39□□□□□ -2.03
C9orf72-205ENST00000488117 MEF2DQ14814 521 aa2.39□□□□□ -2.03
C9orf72-205ENST00000488117 RBMS2Q15434 407 aaKnown RBP2.39□□□□□ -2.03
C9orf72-205ENST00000488117 C4orf46Q504U0 113 aa2.39□□□□□ -2.03
C9orf72-205ENST00000488117 APOOLQ6UXV4 268 aa2.39□□□□□ -2.03
C9orf72-205ENST00000488117 LANCL3Q6ZV70 420 aa2.39□□□□□ -2.03
C9orf72-205ENST00000488117 CREB3L2Q70SY1 520 aa2.39□□□□□ -2.03
C9orf72-205ENST00000488117 ADGRE4PQ86SQ3 457 aa2.39□□□□□ -2.03
C9orf72-205ENST00000488117 GPAT4Q86UL3 456 aa2.39□□□□□ -2.03
C9orf72-205ENST00000488117 GLCCI1Q86VQ1 547 aa2.39□□□□□ -2.03
C9orf72-205ENST00000488117 WDR5BQ86VZ2 330 aa2.39□□□□□ -2.03
C9orf72-205ENST00000488117 TIGD4Q8IY51 512 aa2.39□□□□□ -2.03
C9orf72-205ENST00000488117 RFLNBQ8N5W9 214 aa2.39□□□□□ -2.03
C9orf72-205ENST00000488117 ZNF283Q8N7M2 679 aa2.39□□□□□ -2.03
C9orf72-205ENST00000488117 OR6N1Q8NGY5 312 aa2.39□□□□□ -2.03
C9orf72-205ENST00000488117 ZPLD1Q8TCW7 415 aa2.39□□□□□ -2.03
C9orf72-205ENST00000488117 TNFAIP8L1Q8WVP5 186 aa2.39□□□□□ -2.03
C9orf72-205ENST00000488117 ASB10Q8WXI3 467 aa2.39□□□□□ -2.03
C9orf72-205ENST00000488117 UPRTQ96BW1 309 aa2.39□□□□□ -2.03
C9orf72-205ENST00000488117 HAVCR1Q96D42 359 aa2.39□□□□□ -2.03
C9orf72-205ENST00000488117 SLC25A44Q96H78 314 aaPredicted RBP2.39□□□□□ -2.03
C9orf72-205ENST00000488117 TSSK2Q96PF2 358 aa2.39□□□□□ -2.03
C9orf72-205ENST00000488117 SCGB3A2Q96PL1 93 aa2.39□□□□□ -2.03
C9orf72-205ENST00000488117 NUDT22Q9BRQ3 303 aa2.39□□□□□ -2.03
C9orf72-205ENST00000488117 PDCD10Q9BUL8 212 aa2.39□□□□□ -2.03
C9orf72-205ENST00000488117 TRAF4Q9BUZ4 470 aaPredicted RBP2.39□□□□□ -2.03
C9orf72-205ENST00000488117 C1orf198Q9H425 327 aa2.39□□□□□ -2.03
C9orf72-205ENST00000488117 GAREM1Q9H706 876 aa2.39□□□□□ -2.03
C9orf72-205ENST00000488117 SCPEP1Q9HB40 452 aa2.39□□□□□ -2.03
C9orf72-205ENST00000488117 HRASLSQ9HDD0 168 aa2.39□□□□□ -2.03
C9orf72-205ENST00000488117 ATXN7L1Q9ULK2 861 aaPredicted RBP2.39□□□□□ -2.03
C9orf72-205ENST00000488117 MGAT4AQ9UM21 535 aa2.39□□□□□ -2.03
C9orf72-205ENST00000488117 B3GALT5Q9Y2C3 310 aa2.39□□□□□ -2.03
C9orf72-205ENST00000488117 PCDHGA9Q9Y5G4 932 aaKnown RBP2.39□□□□□ -2.03
C9orf72-205ENST00000488117 PLXND1Q9Y4D7 1925 aa2.39□□□□□ -2.03
C9orf72-205ENST00000488117 A0A0A6YYH2 397 aa2.39□□□□□ -2.03
C9orf72-205ENST00000488117 TRBV5-5A0A0J9YX44 114 aa2.39□□□□□ -2.03
C9orf72-205ENST00000488117 A0A1B0GUH1 482 aa2.39□□□□□ -2.03
C9orf72-205ENST00000488117 A0A1W2PPC1 479 aa2.39□□□□□ -2.03
C9orf72-205ENST00000488117 SLC22A23A1A5C7 686 aa2.39□□□□□ -2.03
C9orf72-205ENST00000488117 A6NJ64 397 aa2.39□□□□□ -2.03
C9orf72-205ENST00000488117 H3BSH0 61 aa2.39□□□□□ -2.03
C9orf72-205ENST00000488117 SULT2B1O00204 365 aa2.39□□□□□ -2.03
C9orf72-205ENST00000488117 XRCC3O43542 346 aa2.39□□□□□ -2.03
C9orf72-205ENST00000488117 SIGLEC6O43699 453 aa2.39□□□□□ -2.03
C9orf72-205ENST00000488117 DXOO77932 396 aaKnown RBP2.39□□□□□ -2.03
C9orf72-205ENST00000488117 ZFPL1O95159 310 aa2.39□□□□□ -2.03
C9orf72-205ENST00000488117 CYB5AP00167 134 aa2.39□□□□□ -2.03
C9orf72-205ENST00000488117 DCNP07585 359 aaKnown RBP2.39□□□□□ -2.03
C9orf72-205ENST00000488117 HCKP08631 526 aa2.39□□□□□ -2.03
C9orf72-205ENST00000488117 ICAM2P13598 275 aa2.39□□□□□ -2.03
C9orf72-205ENST00000488117 ALOX5APP20292 161 aa2.39□□□□□ -2.03
C9orf72-205ENST00000488117 BDKRB2P30411 391 aa2.39□□□□□ -2.03
C9orf72-205ENST00000488117 CSF2RBP32927 897 aa2.39□□□□□ -2.03
C9orf72-205ENST00000488117 THBS2P35442 1172 aa2.39□□□□□ -2.03
C9orf72-205ENST00000488117 CCR6P51684 374 aa2.39□□□□□ -2.03
C9orf72-205ENST00000488117 GRB2P62993 217 aaKnown RBP2.39□□□□□ -2.03
C9orf72-205ENST00000488117 FOXF1Q12946 379 aa2.39□□□□□ -2.03
C9orf72-205ENST00000488117 SF3B4Q15427 424 aaKnown RBP eCLIP2.39□□□□□ -2.03
C9orf72-205ENST00000488117 FCN2Q15485 313 aa2.39□□□□□ -2.03
C9orf72-205ENST00000488117 RAET1LQ5VY80 246 aa2.39□□□□□ -2.03
C9orf72-205ENST00000488117 CARD17Q5XLA6 110 aa2.39□□□□□ -2.03
C9orf72-205ENST00000488117 OLFML2AQ68BL7 652 aa2.39□□□□□ -2.03
C9orf72-205ENST00000488117 RAB12Q6IQ22 244 aa2.39□□□□□ -2.03
C9orf72-205ENST00000488117 DEGS2Q6QHC5 323 aa2.39□□□□□ -2.03
C9orf72-205ENST00000488117 PGAP1Q75T13 922 aa2.39□□□□□ -2.03
C9orf72-205ENST00000488117 FAM122BQ7Z309 247 aa2.39□□□□□ -2.03
C9orf72-205ENST00000488117 DCXRQ7Z4W1 244 aa2.39□□□□□ -2.03
C9orf72-205ENST00000488117 SERPINA12Q8IW75 414 aa2.39□□□□□ -2.03
C9orf72-205ENST00000488117 ADPRHL1Q8NDY3 354 aa2.39□□□□□ -2.03
C9orf72-205ENST00000488117 NOXO1Q8NFA2 376 aa2.39□□□□□ -2.03
C9orf72-205ENST00000488117 OR5D14Q8NGL3 314 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms