RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 VPS26BQ4G0F5 336 aa1.69□□□□□ -2.14
R3HDM1-219ENST00000488035 SOHLH1Q5JUK2 328 aa1.69□□□□□ -2.14
R3HDM1-219ENST00000488035 HES5Q5TA89 166 aa1.69□□□□□ -2.14
R3HDM1-219ENST00000488035 FAM92BQ6ZTR7 304 aa1.69□□□□□ -2.14
R3HDM1-219ENST00000488035 TAS2R42Q7RTR8 314 aa1.69□□□□□ -2.14
R3HDM1-219ENST00000488035 NANOGNBQ7Z5D8 188 aa1.69□□□□□ -2.14
R3HDM1-219ENST00000488035 ZNF695Q8IW36 515 aa1.69□□□□□ -2.14
R3HDM1-219ENST00000488035 PDIK1LQ8N165 341 aa1.69□□□□□ -2.14
R3HDM1-219ENST00000488035 RAB3IL1Q8TBN0 382 aa1.69□□□□□ -2.14
R3HDM1-219ENST00000488035 SLC7A13Q8TCU3 470 aa1.69□□□□□ -2.14
R3HDM1-219ENST00000488035 FAM3DQ96BQ1 224 aa1.69□□□□□ -2.14
R3HDM1-219ENST00000488035 STARD4Q96DR4 205 aa1.69□□□□□ -2.14
R3HDM1-219ENST00000488035 PKNOX2Q96KN3 472 aa1.69□□□□□ -2.14
R3HDM1-219ENST00000488035 P2RX4Q99571 388 aa1.69□□□□□ -2.14
R3HDM1-219ENST00000488035 NUP58Q9BVL2 599 aa1.69□□□□□ -2.14
R3HDM1-219ENST00000488035 RACGAP1Q9H0H5 632 aa1.69□□□□□ -2.14
R3HDM1-219ENST00000488035 TM9SF3Q9HD45 589 aa1.69□□□□□ -2.14
R3HDM1-219ENST00000488035 KCNJ16Q9NPI9 418 aa1.69□□□□□ -2.14
R3HDM1-219ENST00000488035 ZNF629Q9UEG4 869 aaPredicted RBP1.69□□□□□ -2.14
R3HDM1-219ENST00000488035 NUP50Q9UKX7 468 aa1.69□□□□□ -2.14
R3HDM1-219ENST00000488035 CABIN1Q9Y6J0 2220 aa1.68□□□□□ -2.14
R3HDM1-219ENST00000488035 CAMTA1Q9Y6Y1 1673 aa1.68□□□□□ -2.14
R3HDM1-219ENST00000488035 IGKV2D-24A0A075B6R9 120 aa1.68□□□□□ -2.14
R3HDM1-219ENST00000488035 TRAV39A0A0B4J263 110 aa1.68□□□□□ -2.14
R3HDM1-219ENST00000488035 A0A0B4J2A0 478 aa1.68□□□□□ -2.14
R3HDM1-219ENST00000488035 HEATR9A2RTY3 570 aa1.68□□□□□ -2.14
R3HDM1-219ENST00000488035 AP3B1O00203 1094 aa1.68□□□□□ -2.14
R3HDM1-219ENST00000488035 MRPS12O15235 138 aaKnown RBP1.68□□□□□ -2.14
R3HDM1-219ENST00000488035 EIF3HO15372 352 aaKnown RBP eCLIP1.68□□□□□ -2.14
R3HDM1-219ENST00000488035 MAGEB4O15481 346 aaPredicted RBP1.68□□□□□ -2.14
R3HDM1-219ENST00000488035 RNF13O43567 381 aa1.68□□□□□ -2.14
R3HDM1-219ENST00000488035 EEDO75530 441 aaKnown RBP1.68□□□□□ -2.14
R3HDM1-219ENST00000488035 FABP3P05413 133 aa1.68□□□□□ -2.14
R3HDM1-219ENST00000488035 ZNF250P15622 560 aa1.68□□□□□ -2.14
R3HDM1-219ENST00000488035 TNNI1P19237 187 aa1.68□□□□□ -2.14
R3HDM1-219ENST00000488035 GDI1P31150 447 aa1.68□□□□□ -2.14
R3HDM1-219ENST00000488035 TMED10P49755 219 aaKnown RBP1.68□□□□□ -2.14
R3HDM1-219ENST00000488035 RND2P52198 227 aa1.68□□□□□ -2.14
R3HDM1-219ENST00000488035 ACLYP53396 1101 aa1.68□□□□□ -2.14
R3HDM1-219ENST00000488035 CDH6P55285 790 aa1.68□□□□□ -2.14
R3HDM1-219ENST00000488035 HERVK_113P61574 105 aa1.68□□□□□ -2.14
R3HDM1-219ENST00000488035 MXD1Q05195 221 aa1.68□□□□□ -2.14
R3HDM1-219ENST00000488035 ECH1Q13011 328 aa1.68□□□□□ -2.14
R3HDM1-219ENST00000488035 ALKBH6Q3KRA9 238 aa1.68□□□□□ -2.14
R3HDM1-219ENST00000488035 PTPN20Q4JDL3 420 aa1.68□□□□□ -2.14
R3HDM1-219ENST00000488035 LINC00483Q53H64 154 aa1.68□□□□□ -2.14
R3HDM1-219ENST00000488035 SLC8B1Q6J4K2 584 aa1.68□□□□□ -2.14
R3HDM1-219ENST00000488035 CEMP1Q6PRD7 247 aaPredicted RBP1.68□□□□□ -2.14
R3HDM1-219ENST00000488035 TMEM179Q6ZVK1 233 aa1.68□□□□□ -2.14
R3HDM1-219ENST00000488035 TMEM135Q86UB9 458 aa1.68□□□□□ -2.14
R3HDM1-219ENST00000488035 SAXO1Q8IYX7 474 aa1.68□□□□□ -2.14
R3HDM1-219ENST00000488035 SPATA4Q8NEY3 305 aa1.68□□□□□ -2.14
R3HDM1-219ENST00000488035 RHEBL1Q8TAI7 183 aa1.68□□□□□ -2.14
R3HDM1-219ENST00000488035 ZNF502Q8TBZ5 544 aa1.68□□□□□ -2.14
R3HDM1-219ENST00000488035 CXorf40AQ8TE69 158 aa1.68□□□□□ -2.14
R3HDM1-219ENST00000488035 PIBF1Q8WXW3 757 aa1.68□□□□□ -2.14
R3HDM1-219ENST00000488035 ELMO1Q92556 727 aa1.68□□□□□ -2.14
R3HDM1-219ENST00000488035 N4BP2L2Q92802 583 aaPredicted RBP1.68□□□□□ -2.14
R3HDM1-219ENST00000488035 STMN2Q93045 179 aa1.68□□□□□ -2.14
R3HDM1-219ENST00000488035 RASD2Q96D21 266 aa1.68□□□□□ -2.14
R3HDM1-219ENST00000488035 NEURL3Q96EH8 262 aa1.68□□□□□ -2.14
R3HDM1-219ENST00000488035 PIK3IP1Q96FE7 263 aa1.68□□□□□ -2.14
R3HDM1-219ENST00000488035 TPD52L3Q96J77 140 aa1.68□□□□□ -2.14
R3HDM1-219ENST00000488035 OR5B12Q96R08 314 aa1.68□□□□□ -2.14
R3HDM1-219ENST00000488035 OR2A5Q96R48 311 aa1.68□□□□□ -2.14
R3HDM1-219ENST00000488035 SH3GL3Q99963 347 aa1.68□□□□□ -2.14
R3HDM1-219ENST00000488035 IFI27L2Q9H2X8 130 aa1.68□□□□□ -2.14
R3HDM1-219ENST00000488035 SHPKQ9UHJ6 478 aa1.68□□□□□ -2.14
R3HDM1-219ENST00000488035 ZNF222Q9UK12 451 aa1.68□□□□□ -2.14
R3HDM1-219ENST00000488035 IGHV5-51A0A0C4DH38 117 aa1.67□□□□□ -2.14
R3HDM1-219ENST00000488035 IGHV3-66A0A0C4DH42 116 aa1.67□□□□□ -2.14
R3HDM1-219ENST00000488035 GLYATL1P3A0A0U1RQE8 302 aa1.67□□□□□ -2.14
R3HDM1-219ENST00000488035 SMCO2A6NFE2 343 aa1.67□□□□□ -2.14
R3HDM1-219ENST00000488035 TRIM64CA6NLI5 447 aa1.67□□□□□ -2.14
R3HDM1-219ENST00000488035 CDC7O00311 574 aa1.67□□□□□ -2.14
R3HDM1-219ENST00000488035 AIREO43918 545 aa1.67□□□□□ -2.14
R3HDM1-219ENST00000488035 SPAG7O75391 227 aa1.67□□□□□ -2.14
R3HDM1-219ENST00000488035 OR2J3O76001 311 aa1.67□□□□□ -2.14
R3HDM1-219ENST00000488035 SRP72O76094 671 aaKnown RBP1.67□□□□□ -2.14
R3HDM1-219ENST00000488035 GABARAPO95166 117 aa1.67□□□□□ -2.14
R3HDM1-219ENST00000488035 SERPINA5P05154 406 aa1.67□□□□□ -2.14
R3HDM1-219ENST00000488035 CDKN2BP42772 138 aa1.67□□□□□ -2.14
R3HDM1-219ENST00000488035 CYB561P49447 251 aa1.67□□□□□ -2.14
R3HDM1-219ENST00000488035 SSR4P51571 173 aa1.67□□□□□ -2.14
R3HDM1-219ENST00000488035 ATP5IP56385 69 aaPredicted RBP1.67□□□□□ -2.14
R3HDM1-219ENST00000488035 PFN3P60673 137 aa1.67□□□□□ -2.14
R3HDM1-219ENST00000488035 BEX3Q00994 111 aa1.67□□□□□ -2.14
R3HDM1-219ENST00000488035 TGM3Q08188 693 aa1.67□□□□□ -2.14
R3HDM1-219ENST00000488035 SRSF5Q13243 272 aaKnown RBP1.67□□□□□ -2.14
R3HDM1-219ENST00000488035 MAB21L1Q13394 359 aa1.67□□□□□ -2.14
R3HDM1-219ENST00000488035 EIF4EBP1Q13541 118 aaPredicted RBP1.67□□□□□ -2.14
R3HDM1-219ENST00000488035 MOBPQ13875 183 aa1.67□□□□□ -2.14
R3HDM1-219ENST00000488035 STK11Q15831 433 aa1.67□□□□□ -2.14
R3HDM1-219ENST00000488035 XKR7Q5GH72 579 aa1.67□□□□□ -2.14
R3HDM1-219ENST00000488035 TEX43Q6ZNM6 134 aa1.67□□□□□ -2.14
R3HDM1-219ENST00000488035 H2AFVQ71UI9 128 aa1.67□□□□□ -2.14
R3HDM1-219ENST00000488035 GTPBP8Q8N3Z3 284 aaPredicted RBP1.67□□□□□ -2.14
R3HDM1-219ENST00000488035 LIX1Q8N485 282 aa1.67□□□□□ -2.14
R3HDM1-219ENST00000488035 OR56B2PQ8NGI1 322 aa1.67□□□□□ -2.14
R3HDM1-219ENST00000488035 OR10G4Q8NGN3 311 aa1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms