RNA–Protein interactions for RNA: ENST00000487711.5

TTC3-220, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-220ENST00000487711 PPP1R7Q15435 360 aa2.4□□□□□ -2.03
TTC3-220ENST00000487711 LRRC10Q5BKY1 277 aa2.4□□□□□ -2.03
TTC3-220ENST00000487711 C10orf120Q5SQS8 335 aa2.4□□□□□ -2.03
TTC3-220ENST00000487711 MARCH8Q5T0T0 291 aa2.4□□□□□ -2.03
TTC3-220ENST00000487711 OR2G6Q5TZ20 316 aa2.4□□□□□ -2.03
TTC3-220ENST00000487711 ANXA8L1Q5VT79 327 aa2.4□□□□□ -2.03
TTC3-220ENST00000487711 OR52E8Q6IFG1 317 aa2.4□□□□□ -2.03
TTC3-220ENST00000487711 ZSCAN25Q6NSZ9 544 aa2.4□□□□□ -2.03
TTC3-220ENST00000487711 LRRC31Q6UY01 552 aa2.4□□□□□ -2.03
TTC3-220ENST00000487711 PGAP1Q75T13 922 aa2.4□□□□□ -2.03
TTC3-220ENST00000487711 CAMK2N1Q7Z7J9 78 aa2.4□□□□□ -2.03
TTC3-220ENST00000487711 NBPF5PQ86XG9 351 aaPredicted RBP2.4□□□□□ -2.03
TTC3-220ENST00000487711 PSTKQ8IV42 348 aaKnown RBP2.4□□□□□ -2.03
TTC3-220ENST00000487711 UBE2J2Q8N2K1 259 aa2.4□□□□□ -2.03
TTC3-220ENST00000487711 NECAB1Q8N987 351 aa2.4□□□□□ -2.03
TTC3-220ENST00000487711 CCDC54Q8NEL0 328 aa2.4□□□□□ -2.03
TTC3-220ENST00000487711 CCDC148Q8NFR7 591 aa2.4□□□□□ -2.03
TTC3-220ENST00000487711 OR9K2Q8NGE7 335 aa2.4□□□□□ -2.03
TTC3-220ENST00000487711 OR52K1Q8NGK4 314 aa2.4□□□□□ -2.03
TTC3-220ENST00000487711 OR4D5Q8NGN0 318 aa2.4□□□□□ -2.03
TTC3-220ENST00000487711 EFHD2Q96C19 240 aaPredicted RBP2.4□□□□□ -2.03
TTC3-220ENST00000487711 MRPL45Q9BRJ2 306 aaKnown RBP2.4□□□□□ -2.03
TTC3-220ENST00000487711 CLMPQ9H6B4 373 aa2.4□□□□□ -2.03
TTC3-220ENST00000487711 REEP4Q9H6H4 257 aa2.4□□□□□ -2.03
TTC3-220ENST00000487711 RNF167Q9H6Y7 350 aa2.4□□□□□ -2.03
TTC3-220ENST00000487711 YY1AP1Q9H869 796 aa2.4□□□□□ -2.03
TTC3-220ENST00000487711 SGK2Q9HBY8 427 aa2.4□□□□□ -2.03
TTC3-220ENST00000487711 RAB18Q9NP72 206 aa2.4□□□□□ -2.03
TTC3-220ENST00000487711 UFSP2Q9NUQ7 469 aa2.4□□□□□ -2.03
TTC3-220ENST00000487711 QPCTLQ9NXS2 382 aa2.4□□□□□ -2.03
TTC3-220ENST00000487711 RBAKQ9NYW8 714 aaPredicted RBP2.4□□□□□ -2.03
TTC3-220ENST00000487711 KCNIP1Q9NZI2 227 aa2.4□□□□□ -2.03
TTC3-220ENST00000487711 SEC14L3Q9UDX4 400 aa2.4□□□□□ -2.03
TTC3-220ENST00000487711 GNPTGQ9UJJ9 305 aa2.4□□□□□ -2.03
TTC3-220ENST00000487711 TBX21Q9UL17 535 aa2.4□□□□□ -2.03
TTC3-220ENST00000487711 CDH9Q9ULB4 789 aa2.4□□□□□ -2.03
TTC3-220ENST00000487711 ATP6V1DQ9Y5K8 247 aa2.4□□□□□ -2.03
TTC3-220ENST00000487711 LRP4O75096 1905 aa2.4□□□□□ -2.03
TTC3-220ENST00000487711 MAP3K19Q56UN5 1328 aa2.4□□□□□ -2.03
TTC3-220ENST00000487711 PAPPAQ13219 1627 aa2.39□□□□□ -2.03
TTC3-220ENST00000487711 ABCC12Q96J65 1359 aa2.39□□□□□ -2.03
TTC3-220ENST00000487711 JCADQ9P266 1359 aa2.39□□□□□ -2.03
TTC3-220ENST00000487711 UBR2Q8IWV8 1755 aa2.39□□□□□ -2.03
TTC3-220ENST00000487711 IGLV4-60A0A075B6I1 120 aa2.39□□□□□ -2.03
TTC3-220ENST00000487711 A0A075B6Q4 140 aa2.39□□□□□ -2.03
TTC3-220ENST00000487711 ARHGEF35A5YM69 484 aa2.39□□□□□ -2.03
TTC3-220ENST00000487711 RBMY1BA6NDE4 496 aaKnown RBP2.39□□□□□ -2.03
TTC3-220ENST00000487711 RBMY1EA6NEQ0 496 aaKnown RBP2.39□□□□□ -2.03
TTC3-220ENST00000487711 TCP11X1B4DZS4 312 aa2.39□□□□□ -2.03
TTC3-220ENST00000487711 LOC110117498-PIK3R3F6TDL0 507 aa2.39□□□□□ -2.03
TTC3-220ENST00000487711 AP2A1O95782 977 aa2.39□□□□□ -2.03
TTC3-220ENST00000487711 CRYGBP07316 175 aa2.39□□□□□ -2.03
TTC3-220ENST00000487711 RBMY1DP0C7P1 496 aaKnown RBP2.39□□□□□ -2.03
TTC3-220ENST00000487711 PABPC4LP0CB38 370 aaKnown RBP2.39□□□□□ -2.03
TTC3-220ENST00000487711 RBMY1A1P0DJD3 496 aaKnown RBP2.39□□□□□ -2.03
TTC3-220ENST00000487711 SSR1P43307 286 aaKnown RBP2.39□□□□□ -2.03
TTC3-220ENST00000487711 TNNT2P45379 298 aaPredicted RBP2.39□□□□□ -2.03
TTC3-220ENST00000487711 CCT3P49368 545 aaKnown RBP2.39□□□□□ -2.03
TTC3-220ENST00000487711 CRISP3P54108 245 aa2.39□□□□□ -2.03
TTC3-220ENST00000487711 CDH4P55283 916 aa2.39□□□□□ -2.03
TTC3-220ENST00000487711 GANABQ14697 944 aaKnown RBP2.39□□□□□ -2.03
TTC3-220ENST00000487711 RFX4Q33E94 735 aa2.39□□□□□ -2.03
TTC3-220ENST00000487711 CTSL3PQ5NE16 218 aa2.39□□□□□ -2.03
TTC3-220ENST00000487711 PRAMEF5Q5TYX0 476 aa2.39□□□□□ -2.03
TTC3-220ENST00000487711 PRAMEF6Q5VXH4 476 aa2.39□□□□□ -2.03
TTC3-220ENST00000487711 MTERF4Q7Z6M4 381 aaKnown RBP2.39□□□□□ -2.03
TTC3-220ENST00000487711 ECHDC2Q86YB7 292 aa2.39□□□□□ -2.03
TTC3-220ENST00000487711 DTX3LQ8TDB6 740 aa2.39□□□□□ -2.03
TTC3-220ENST00000487711 PEX13Q92968 403 aa2.39□□□□□ -2.03
TTC3-220ENST00000487711 ITCHQ96J02 903 aa2.39□□□□□ -2.03
TTC3-220ENST00000487711 BCL7BQ9BQE9 202 aa2.39□□□□□ -2.03
TTC3-220ENST00000487711 TMEM246Q9BRR3 403 aa2.39□□□□□ -2.03
TTC3-220ENST00000487711 PARD6BQ9BYG5 372 aa2.39□□□□□ -2.03
TTC3-220ENST00000487711 RAB34Q9BZG1 259 aa2.39□□□□□ -2.03
TTC3-220ENST00000487711 DMAP1Q9NPF5 467 aaPredicted RBP2.39□□□□□ -2.03
TTC3-220ENST00000487711 NECAP2Q9NVZ3 263 aa2.39□□□□□ -2.03
TTC3-220ENST00000487711 THUMPD1Q9NXG2 353 aaKnown RBP2.39□□□□□ -2.03
TTC3-220ENST00000487711 ZNF639Q9UID6 485 aa2.39□□□□□ -2.03
TTC3-220ENST00000487711 PIGLQ9Y2B2 252 aa2.39□□□□□ -2.03
TTC3-220ENST00000487711 LRP6O75581 1613 aa2.39□□□□□ -2.03
TTC3-220ENST00000487711 CPDO75976 1380 aa2.38□□□□□ -2.03
TTC3-220ENST00000487711 CARMIL3Q8ND23 1372 aa2.38□□□□□ -2.03
TTC3-220ENST00000487711 PLCH1Q4KWH8 1693 aa2.38□□□□□ -2.03
TTC3-220ENST00000487711 SPAG7O75391 227 aa2.38□□□□□ -2.03
TTC3-220ENST00000487711 UPK3AO75631 287 aa2.38□□□□□ -2.03
TTC3-220ENST00000487711 TSPAN12O95859 305 aa2.38□□□□□ -2.03
TTC3-220ENST00000487711 TPM3P06753 285 aa2.38□□□□□ -2.03
TTC3-220ENST00000487711 POLR2MP0CAP2 368 aa2.38□□□□□ -2.03
TTC3-220ENST00000487711 HSMCR30P0CW71 290 aa2.38□□□□□ -2.03
TTC3-220ENST00000487711 GLI3P10071 1580 aa2.38□□□□□ -2.03
TTC3-220ENST00000487711 TDGF1P13385 188 aa2.38□□□□□ -2.03
TTC3-220ENST00000487711 HPGDP15428 266 aa2.38□□□□□ -2.03
TTC3-220ENST00000487711 CMA1P23946 247 aa2.38□□□□□ -2.03
TTC3-220ENST00000487711 HMGB2P26583 209 aaKnown RBP2.38□□□□□ -2.03
TTC3-220ENST00000487711 RDXP35241 583 aaKnown RBP2.38□□□□□ -2.03
TTC3-220ENST00000487711 TFPI2P48307 235 aa2.38□□□□□ -2.03
TTC3-220ENST00000487711 CASP4P49662 377 aa2.38□□□□□ -2.03
TTC3-220ENST00000487711 TDGF1P3P51864 188 aa2.38□□□□□ -2.03
TTC3-220ENST00000487711 EFNB2P52799 333 aa2.38□□□□□ -2.03
TTC3-220ENST00000487711 SEC61GP60059 68 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms