RNA–Protein interactions for RNA: ENST00000487645.1

COL4A6-207, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 3

Gene COL4A6, Length 812 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-207ENST00000487645 C22orf34Q6ZV56 151 aa11.66□□□□□ -0.54
COL4A6-207ENST00000487645 DPPA2Q7Z7J5 298 aa11.66□□□□□ -0.54
COL4A6-207ENST00000487645 GLB1L2Q8IW92 636 aa11.66□□□□□ -0.54
COL4A6-207ENST00000487645 CYB561A3Q8NBI2 242 aa11.66□□□□□ -0.54
COL4A6-207ENST00000487645 OR2T4Q8NH00 348 aa11.66□□□□□ -0.54
COL4A6-207ENST00000487645 LINC01560Q8TB33 94 aa11.66□□□□□ -0.54
COL4A6-207ENST00000487645 PTP4A1Q93096 173 aa11.66□□□□□ -0.54
COL4A6-207ENST00000487645 PLEKHA8Q96JA3 519 aa11.66□□□□□ -0.54
COL4A6-207ENST00000487645 HRASLS5Q96KN8 279 aa11.66□□□□□ -0.54
COL4A6-207ENST00000487645 NMNAT2Q9BZQ4 307 aa11.66□□□□□ -0.54
COL4A6-207ENST00000487645 RACGAP1Q9H0H5 632 aa11.66□□□□□ -0.54
COL4A6-207ENST00000487645 NELFAQ9H3P2 528 aa11.66□□□□□ -0.54
COL4A6-207ENST00000487645 FN3KQ9H479 309 aa11.66□□□□□ -0.54
COL4A6-207ENST00000487645 TOR3AQ9H497 397 aa11.66□□□□□ -0.54
COL4A6-207ENST00000487645 MOV10Q9HCE1 1003 aaKnown RBP11.66□□□□□ -0.54
COL4A6-207ENST00000487645 RPRD1BQ9NQG5 326 aaKnown RBP11.66□□□□□ -0.54
COL4A6-207ENST00000487645 ZNF226Q9NYT6 803 aa11.66□□□□□ -0.54
COL4A6-207ENST00000487645 TVP23BQ9NYZ1 205 aa11.66□□□□□ -0.54
COL4A6-207ENST00000487645 KCNN3Q9UGI6 736 aa11.66□□□□□ -0.54
COL4A6-207ENST00000487645 SLC25A15Q9Y619 301 aa11.66□□□□□ -0.54
COL4A6-207ENST00000487645 DCHS2Q6V1P9 2916 aa11.66□□□□□ -0.54
COL4A6-207ENST00000487645 A0A096LPE4 126 aa11.65□□□□□ -0.54
COL4A6-207ENST00000487645 IGLV1-36A0A0B4J1U3 117 aa11.65□□□□□ -0.54
COL4A6-207ENST00000487645 A0A1W2PPZ6 126 aa11.65□□□□□ -0.54
COL4A6-207ENST00000487645 PRR23D1E9PI22 279 aaPredicted RBP11.65□□□□□ -0.54
COL4A6-207ENST00000487645 DCTN6O00399 190 aa11.65□□□□□ -0.54
COL4A6-207ENST00000487645 CASKO14936 926 aa11.65□□□□□ -0.54
COL4A6-207ENST00000487645 SNAP29O95721 258 aa11.65□□□□□ -0.54
COL4A6-207ENST00000487645 THBDP07204 575 aa11.65□□□□□ -0.54
COL4A6-207ENST00000487645 PRR23D2P0DMB1 279 aaPredicted RBP11.65□□□□□ -0.54
COL4A6-207ENST00000487645 LAP3P28838 519 aa11.65□□□□□ -0.54
COL4A6-207ENST00000487645 CENPAP49450 140 aa11.65□□□□□ -0.54
COL4A6-207ENST00000487645 UBE2NP61088 152 aaKnown RBP11.65□□□□□ -0.54
COL4A6-207ENST00000487645 SNTB1Q13884 538 aaKnown RBP11.65□□□□□ -0.54
COL4A6-207ENST00000487645 DAZAP2Q15038 168 aaPredicted RBP11.65□□□□□ -0.54
COL4A6-207ENST00000487645 PPA1Q15181 289 aa11.65□□□□□ -0.54
COL4A6-207ENST00000487645 TAB1Q15750 504 aa11.65□□□□□ -0.54
COL4A6-207ENST00000487645 SNAPC1Q16533 368 aa11.65□□□□□ -0.54
COL4A6-207ENST00000487645 KCNMB1Q16558 191 aa11.65□□□□□ -0.54
COL4A6-207ENST00000487645 SGCAQ16586 387 aa11.65□□□□□ -0.54
COL4A6-207ENST00000487645 ZIK1Q3SY52 487 aaPredicted RBP11.65□□□□□ -0.54
COL4A6-207ENST00000487645 HIKESHIQ53FT3 197 aa11.65□□□□□ -0.54
COL4A6-207ENST00000487645 KLHL24Q6TFL4 600 aa11.65□□□□□ -0.54
COL4A6-207ENST00000487645 GALNT4Q8N4A0 578 aa11.65□□□□□ -0.54
COL4A6-207ENST00000487645 TRUB1Q8WWH5 349 aaKnown RBP11.65□□□□□ -0.54
COL4A6-207ENST00000487645 NABP1Q96AH0 204 aa11.65□□□□□ -0.54
COL4A6-207ENST00000487645 TSSK2Q96PF2 358 aa11.65□□□□□ -0.54
COL4A6-207ENST00000487645 MBOAT4Q96T53 435 aa11.65□□□□□ -0.54
COL4A6-207ENST00000487645 WACQ9BTA9 647 aa11.65□□□□□ -0.54
COL4A6-207ENST00000487645 KCNN2Q9H2S1 579 aa11.65□□□□□ -0.54
COL4A6-207ENST00000487645 VCXQ9H320 206 aa11.65□□□□□ -0.54
COL4A6-207ENST00000487645 SEC61A2Q9H9S3 476 aa11.65□□□□□ -0.54
COL4A6-207ENST00000487645 NGBQ9NPG2 151 aa11.65□□□□□ -0.54
COL4A6-207ENST00000487645 SMPD3Q9NY59 655 aaPredicted RBP11.65□□□□□ -0.54
COL4A6-207ENST00000487645 COA3Q9Y2R0 106 aaPredicted RBP11.65□□□□□ -0.54
COL4A6-207ENST00000487645 CELSR2Q9HCU4 2923 aa11.64□□□□□ -0.55
COL4A6-207ENST00000487645 H0YJX3 145 aa11.64□□□□□ -0.55
COL4A6-207ENST00000487645 DLGAP1O14490 977 aa11.64□□□□□ -0.55
COL4A6-207ENST00000487645 SLC16A6O15403 523 aa11.64□□□□□ -0.55
COL4A6-207ENST00000487645 GOSR1O95249 250 aa11.64□□□□□ -0.55
COL4A6-207ENST00000487645 COX6B1P14854 86 aa11.64□□□□□ -0.55
COL4A6-207ENST00000487645 B4GALT1P15291 398 aa11.64□□□□□ -0.55
COL4A6-207ENST00000487645 CDAP32320 146 aa11.64□□□□□ -0.55
COL4A6-207ENST00000487645 GGT2P36268 569 aa11.64□□□□□ -0.55
COL4A6-207ENST00000487645 BLVRAP53004 296 aa11.64□□□□□ -0.55
COL4A6-207ENST00000487645 CDC42P60953 191 aa11.64□□□□□ -0.55
COL4A6-207ENST00000487645 LSM6P62312 80 aaKnown RBP11.64□□□□□ -0.55
COL4A6-207ENST00000487645 HSF2Q03933 536 aa11.64□□□□□ -0.55
COL4A6-207ENST00000487645 GLO1Q04760 184 aa11.64□□□□□ -0.55
COL4A6-207ENST00000487645 C3orf36Q3SXR2 165 aa11.64□□□□□ -0.55
COL4A6-207ENST00000487645 SKA3Q8IX90 412 aa11.64□□□□□ -0.55
COL4A6-207ENST00000487645 FAM169BQ8N8A8 192 aa11.64□□□□□ -0.55
COL4A6-207ENST00000487645 OR52N5Q8NH56 324 aa11.64□□□□□ -0.55
COL4A6-207ENST00000487645 VCX3BQ9H321 246 aa11.64□□□□□ -0.55
COL4A6-207ENST00000487645 RERGLQ9H628 205 aa11.64□□□□□ -0.55
COL4A6-207ENST00000487645 POLE4Q9NR33 117 aa11.64□□□□□ -0.55
COL4A6-207ENST00000487645 FAM118AQ9NWS6 357 aa11.64□□□□□ -0.55
COL4A6-207ENST00000487645 B3GNT2Q9NY97 397 aa11.64□□□□□ -0.55
COL4A6-207ENST00000487645 CRIM1Q9NZV1 1036 aa11.64□□□□□ -0.55
COL4A6-207ENST00000487645 NDRG4Q9ULP0 352 aaKnown RBP11.64□□□□□ -0.55
COL4A6-207ENST00000487645 MOKQ9UQ07 419 aa11.64□□□□□ -0.55
COL4A6-207ENST00000487645 RTTNQ86VV8 2226 aa11.63□□□□□ -0.55
COL4A6-207ENST00000487645 LOC100130705A0A1B0GUX0 176 aa11.63□□□□□ -0.55
COL4A6-207ENST00000487645 A0A1W2PPL8 197 aa11.63□□□□□ -0.55
COL4A6-207ENST00000487645 FAM183AA6NL82 134 aa11.63□□□□□ -0.55
COL4A6-207ENST00000487645 SEC14L2O76054 403 aa11.63□□□□□ -0.55
COL4A6-207ENST00000487645 UBL3O95164 117 aa11.63□□□□□ -0.55
COL4A6-207ENST00000487645 HRGP04196 525 aa11.63□□□□□ -0.55
COL4A6-207ENST00000487645 CST2P09228 141 aa11.63□□□□□ -0.55
COL4A6-207ENST00000487645 CBR1P16152 277 aa11.63□□□□□ -0.55
COL4A6-207ENST00000487645 SPI1P17947 270 aa11.63□□□□□ -0.55
COL4A6-207ENST00000487645 MSR1P21757 451 aa11.63□□□□□ -0.55
COL4A6-207ENST00000487645 CRYGSP22914 178 aa11.63□□□□□ -0.55
COL4A6-207ENST00000487645 ARR3P36575 388 aa11.63□□□□□ -0.55
COL4A6-207ENST00000487645 PTDSS1P48651 473 aaKnown RBP11.63□□□□□ -0.55
COL4A6-207ENST00000487645 SLC36A2Q495M3 483 aa11.63□□□□□ -0.55
COL4A6-207ENST00000487645 PLBD1Q6P4A8 553 aa11.63□□□□□ -0.55
COL4A6-207ENST00000487645 SLC16A14Q7RTX9 510 aa11.63□□□□□ -0.55
COL4A6-207ENST00000487645 SYT9Q86SS6 491 aa11.63□□□□□ -0.55
COL4A6-207ENST00000487645 CPOQ8IVL8 374 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms