RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 LUZP2Q86TE4 346 aa16.17■□□□□ 0.18
PDLIM7-207ENST00000486828 NFAM1Q8NET5 270 aaPredicted RBP16.17■□□□□ 0.18
PDLIM7-207ENST00000486828 OR8K3Q8NH51 312 aa16.17■□□□□ 0.18
PDLIM7-207ENST00000486828 ST8SIA1Q92185 356 aa16.17■□□□□ 0.18
PDLIM7-207ENST00000486828 PTTG3PQ9NZH4 202 aa16.17■□□□□ 0.18
PDLIM7-207ENST00000486828 PCNX3Q9H6A9 2034 aa16.17■□□□□ 0.18
PDLIM7-207ENST00000486828 H3BSH0 61 aa16.17■□□□□ 0.18
PDLIM7-207ENST00000486828 GLSO94925 669 aaPredicted RBP16.17■□□□□ 0.18
PDLIM7-207ENST00000486828 SDHBP21912 280 aa16.17■□□□□ 0.18
PDLIM7-207ENST00000486828 CRABP1P29762 137 aa16.17■□□□□ 0.18
PDLIM7-207ENST00000486828 FBXW4P57775 412 aa16.17■□□□□ 0.18
PDLIM7-207ENST00000486828 ZNF574Q6ZN55 896 aaPredicted RBP16.17■□□□□ 0.18
PDLIM7-207ENST00000486828 DNM1P46Q6ZS02 220 aa16.17■□□□□ 0.18
PDLIM7-207ENST00000486828 KRT77Q7Z794 578 aa16.17■□□□□ 0.18
PDLIM7-207ENST00000486828 BEST4Q8NFU0 473 aa16.17■□□□□ 0.18
PDLIM7-207ENST00000486828 DACT3Q96B18 629 aaPredicted RBP16.17■□□□□ 0.18
PDLIM7-207ENST00000486828 NKIRAS2Q9NYR9 191 aa16.17■□□□□ 0.18
PDLIM7-207ENST00000486828 MEIKINA0A087WXM9 373 aa16.16■□□□□ 0.18
PDLIM7-207ENST00000486828 H0YC42 278 aa16.16■□□□□ 0.18
PDLIM7-207ENST00000486828 K7ESF4 209 aa16.16■□□□□ 0.18
PDLIM7-207ENST00000486828 PRAF2O60831 178 aa16.16■□□□□ 0.18
PDLIM7-207ENST00000486828 ALX3O95076 343 aa16.16■□□□□ 0.18
PDLIM7-207ENST00000486828 HEXBP07686 556 aa16.16■□□□□ 0.18
PDLIM7-207ENST00000486828 TMIGD3P0DMS9 266 aaPredicted RBP16.16■□□□□ 0.18
PDLIM7-207ENST00000486828 ARRB1P49407 418 aaPredicted RBP16.16■□□□□ 0.18
PDLIM7-207ENST00000486828 SUMO3P55854 103 aaPredicted RBP16.16■□□□□ 0.18
PDLIM7-207ENST00000486828 ACY1Q03154 408 aa16.16■□□□□ 0.18
PDLIM7-207ENST00000486828 C17orf67Q0P5P2 114 aa16.16■□□□□ 0.18
PDLIM7-207ENST00000486828 EIF2B1Q14232 305 aaKnown RBP16.16■□□□□ 0.18
PDLIM7-207ENST00000486828 OR5M10Q6IEU7 315 aa16.16■□□□□ 0.18
PDLIM7-207ENST00000486828 ZNF454Q8N9F8 522 aa16.16■□□□□ 0.18
PDLIM7-207ENST00000486828 SLC38A9Q8NBW4 561 aa16.16■□□□□ 0.18
PDLIM7-207ENST00000486828 ZNF248Q8NDW4 579 aa16.16■□□□□ 0.18
PDLIM7-207ENST00000486828 NUBPLQ8TB37 319 aa16.16■□□□□ 0.18
PDLIM7-207ENST00000486828 ZNF431Q8TF32 576 aaPredicted RBP16.16■□□□□ 0.18
PDLIM7-207ENST00000486828 MS4A3Q96HJ5 214 aa16.16■□□□□ 0.18
PDLIM7-207ENST00000486828 ABHD6Q9BV23 337 aa16.16■□□□□ 0.18
PDLIM7-207ENST00000486828 ATXN7L1Q9ULK2 861 aaPredicted RBP16.16■□□□□ 0.18
PDLIM7-207ENST00000486828 SLC22A13Q9Y226 551 aa16.16■□□□□ 0.18
PDLIM7-207ENST00000486828 A0A1B0GVI7 797 aa16.15■□□□□ 0.18
PDLIM7-207ENST00000486828 XRCC3O43542 346 aa16.15■□□□□ 0.18
PDLIM7-207ENST00000486828 SSNA1O43805 119 aa16.15■□□□□ 0.18
PDLIM7-207ENST00000486828 ZNF354AO60765 605 aaPredicted RBP16.15■□□□□ 0.18
PDLIM7-207ENST00000486828 PNPP00491 289 aa16.15■□□□□ 0.18
PDLIM7-207ENST00000486828 SYPP08247 313 aa16.15■□□□□ 0.18
PDLIM7-207ENST00000486828 PTHLHP12272 177 aa16.15■□□□□ 0.18
PDLIM7-207ENST00000486828 IL11P20809 199 aa16.15■□□□□ 0.18
PDLIM7-207ENST00000486828 CCKBRP32239 447 aa16.15■□□□□ 0.18
PDLIM7-207ENST00000486828 RIDAP52758 137 aaKnown RBP16.15■□□□□ 0.18
PDLIM7-207ENST00000486828 GLO1Q04760 184 aa16.15■□□□□ 0.18
PDLIM7-207ENST00000486828 PUDPQ08623 228 aa16.15■□□□□ 0.18
PDLIM7-207ENST00000486828 ZP4Q12836 540 aa16.15■□□□□ 0.18
PDLIM7-207ENST00000486828 PLA2G7Q13093 441 aa16.15■□□□□ 0.18
PDLIM7-207ENST00000486828 NKAIN1Q4KMZ8 207 aa16.15■□□□□ 0.18
PDLIM7-207ENST00000486828 ZNF767PQ75MW2 155 aa16.15■□□□□ 0.18
PDLIM7-207ENST00000486828 GLB1L2Q8IW92 636 aa16.15■□□□□ 0.18
PDLIM7-207ENST00000486828 HGDQ93099 445 aa16.15■□□□□ 0.18
PDLIM7-207ENST00000486828 RELTQ969Z4 430 aa16.15■□□□□ 0.18
PDLIM7-207ENST00000486828 NXPE2Q96DL1 559 aa16.15■□□□□ 0.18
PDLIM7-207ENST00000486828 MESP1Q9BRJ9 268 aa16.15■□□□□ 0.18
PDLIM7-207ENST00000486828 BEX1Q9HBH7 125 aa16.15■□□□□ 0.18
PDLIM7-207ENST00000486828 SUSD2Q9UGT4 822 aa16.15■□□□□ 0.18
PDLIM7-207ENST00000486828 MGAT4AQ9UM21 535 aa16.15■□□□□ 0.18
PDLIM7-207ENST00000486828 FLVCR2Q9UPI3 526 aa16.15■□□□□ 0.18
PDLIM7-207ENST00000486828 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.15■□□□□ 0.18
PDLIM7-207ENST00000486828 C2orf72A6NCS6 295 aa16.15■□□□□ 0.18
PDLIM7-207ENST00000486828 A6NIZ1 184 aa16.15■□□□□ 0.18
PDLIM7-207ENST00000486828 TTLL8A6PVC2 850 aa16.15■□□□□ 0.18
PDLIM7-207ENST00000486828 MS4A18H0YCH9 400 aa16.15■□□□□ 0.18
PDLIM7-207ENST00000486828 ALOX12BO75342 701 aa16.15■□□□□ 0.18
PDLIM7-207ENST00000486828 TGM6O95932 706 aa16.15■□□□□ 0.18
PDLIM7-207ENST00000486828 HPXP02790 462 aa16.15■□□□□ 0.18
PDLIM7-207ENST00000486828 HLA-DOBP13765 273 aa16.15■□□□□ 0.18
PDLIM7-207ENST00000486828 PNLIPP16233 465 aa16.15■□□□□ 0.18
PDLIM7-207ENST00000486828 APOBEC1P41238 236 aaKnown RBP16.15■□□□□ 0.18
PDLIM7-207ENST00000486828 CXCL12P48061 93 aa16.15■□□□□ 0.18
PDLIM7-207ENST00000486828 RAP1BP61224 184 aa16.15■□□□□ 0.18
PDLIM7-207ENST00000486828 RAP1AP62834 184 aa16.15■□□□□ 0.18
PDLIM7-207ENST00000486828 MFSD13AQ14CX5 517 aa16.15■□□□□ 0.18
PDLIM7-207ENST00000486828 MS4A18Q3C1V0 323 aa16.15■□□□□ 0.18
PDLIM7-207ENST00000486828 ZNF782Q6ZMW2 699 aaPredicted RBP16.15■□□□□ 0.18
PDLIM7-207ENST00000486828 OR52N5Q8NH56 324 aa16.15■□□□□ 0.18
PDLIM7-207ENST00000486828 MFSD8Q8NHS3 518 aa16.15■□□□□ 0.18
PDLIM7-207ENST00000486828 THAP3Q8WTV1 239 aaPredicted RBP16.15■□□□□ 0.18
PDLIM7-207ENST00000486828 SNAPC3Q92966 411 aa16.15■□□□□ 0.18
PDLIM7-207ENST00000486828 NPAS1Q99742 590 aa16.15■□□□□ 0.18
PDLIM7-207ENST00000486828 PPIEQ9UNP9 301 aaKnown RBP16.15■□□□□ 0.18
PDLIM7-207ENST00000486828 COA3Q9Y2R0 106 aaPredicted RBP16.15■□□□□ 0.18
PDLIM7-207ENST00000486828 HTR2BP41595 481 aa16.14■□□□□ 0.17
PDLIM7-207ENST00000486828 DLX5P56178 289 aa16.14■□□□□ 0.17
PDLIM7-207ENST00000486828 MFGE8Q08431 387 aaPredicted RBP16.14■□□□□ 0.17
PDLIM7-207ENST00000486828 SQSTM1Q13501 440 aa16.14■□□□□ 0.17
PDLIM7-207ENST00000486828 OR7E24Q6IFN5 339 aa16.14■□□□□ 0.17
PDLIM7-207ENST00000486828 ANKRD16Q6P6B7 361 aa16.14■□□□□ 0.17
PDLIM7-207ENST00000486828 CATSPERDQ86XM0 798 aa16.14■□□□□ 0.17
PDLIM7-207ENST00000486828 IQCF2Q8IXL9 164 aa16.14■□□□□ 0.17
PDLIM7-207ENST00000486828 PIAS4Q8N2W9 510 aaPredicted RBP16.14■□□□□ 0.17
PDLIM7-207ENST00000486828 ASB10Q8WXI3 467 aa16.14■□□□□ 0.17
PDLIM7-207ENST00000486828 GPR137Q96N19 417 aa16.14■□□□□ 0.17
PDLIM7-207ENST00000486828 OR10A4Q9H209 315 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms