RNA–Protein interactions for RNA: ENST00000486311.5

SREBF1-214, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 473 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-214ENST00000486311 ZNF416Q9BWM5 594 aa19.18■□□□□ 0.66
SREBF1-214ENST00000486311 LRMDAQ9H2I8 198 aa19.18■□□□□ 0.66
SREBF1-214ENST00000486311 SIAEQ9HAT2 523 aa19.18■□□□□ 0.66
SREBF1-214ENST00000486311 SMURF2Q9HAU4 748 aa19.18■□□□□ 0.66
SREBF1-214ENST00000486311 HINT3Q9NQE9 182 aaKnown RBP19.18■□□□□ 0.66
SREBF1-214ENST00000486311 SAR1AQ9NR31 198 aa19.18■□□□□ 0.66
SREBF1-214ENST00000486311 MED31Q9Y3C7 131 aa19.18■□□□□ 0.66
SREBF1-214ENST00000486311 C17orf100A8MU93 164 aa19.17■□□□□ 0.66
SREBF1-214ENST00000486311 RP2O75695 350 aa19.17■□□□□ 0.66
SREBF1-214ENST00000486311 LCKP06239 509 aa19.17■□□□□ 0.66
SREBF1-214ENST00000486311 SAGP10523 405 aaPredicted RBP19.17■□□□□ 0.66
SREBF1-214ENST00000486311 SRP14P37108 136 aaKnown RBP19.17■□□□□ 0.66
SREBF1-214ENST00000486311 RAD52P43351 418 aa19.17■□□□□ 0.66
SREBF1-214ENST00000486311 MAGEB1P43366 347 aa19.17■□□□□ 0.66
SREBF1-214ENST00000486311 ERVS71-1P61550 626 aa19.17■□□□□ 0.66
SREBF1-214ENST00000486311 MRPS34P82930 218 aaKnown RBP19.17■□□□□ 0.66
SREBF1-214ENST00000486311 MAPRE2Q15555 327 aa19.17■□□□□ 0.66
SREBF1-214ENST00000486311 ALKBH6Q3KRA9 238 aa19.17■□□□□ 0.66
SREBF1-214ENST00000486311 CYBRD1Q53TN4 286 aa19.17■□□□□ 0.66
SREBF1-214ENST00000486311 LRRC18Q8N456 261 aa19.17■□□□□ 0.66
SREBF1-214ENST00000486311 TSPAN32Q96QS1 320 aa19.17■□□□□ 0.66
SREBF1-214ENST00000486311 BCL2L14Q9BZR8 327 aa19.17■□□□□ 0.66
SREBF1-214ENST00000486311 OR51B6Q9H340 312 aa19.17■□□□□ 0.66
SREBF1-214ENST00000486311 SLCO1C1Q9NYB5 712 aa19.17■□□□□ 0.66
SREBF1-214ENST00000486311 ARL2BPQ9Y2Y0 163 aa19.17■□□□□ 0.66
SREBF1-214ENST00000486311 UGT2A1Q9Y4X1 527 aa19.17■□□□□ 0.66
SREBF1-214ENST00000486311 FAM220BPB1ANY3 271 aa19.16■□□□□ 0.66
SREBF1-214ENST00000486311 SLC2A10O95528 541 aa19.16■□□□□ 0.66
SREBF1-214ENST00000486311 TFP02787 698 aa19.16■□□□□ 0.66
SREBF1-214ENST00000486311 KDELR2P33947 212 aa19.16■□□□□ 0.66
SREBF1-214ENST00000486311 SF3A3Q12874 501 aaKnown RBP eCLIP19.16■□□□□ 0.662e-9■■■■□ 19.4
SREBF1-214ENST00000486311 PCGF3Q3KNV8 242 aa19.16■□□□□ 0.66
SREBF1-214ENST00000486311 GLCCI1Q86VQ1 547 aa19.16■□□□□ 0.66
SREBF1-214ENST00000486311 CCDC197Q8NCU1 140 aa19.16■□□□□ 0.66
SREBF1-214ENST00000486311 HDAC2Q92769 488 aaKnown RBP19.16■□□□□ 0.66
SREBF1-214ENST00000486311 NABP1Q96AH0 204 aa19.16■□□□□ 0.66
SREBF1-214ENST00000486311 NARFLQ9H6Q4 476 aa19.16■□□□□ 0.66
SREBF1-214ENST00000486311 NKIRAS2Q9NYR9 191 aa19.16■□□□□ 0.66
SREBF1-214ENST00000486311 HTR3EA5X5Y0 456 aa19.15■□□□□ 0.66
SREBF1-214ENST00000486311 WNT9BO14905 357 aa19.15■□□□□ 0.66
SREBF1-214ENST00000486311 PPIHO43447 177 aaKnown RBP19.15■□□□□ 0.66
SREBF1-214ENST00000486311 CCDC22O60826 627 aa19.15■□□□□ 0.66
SREBF1-214ENST00000486311 APLNRP35414 380 aa19.15■□□□□ 0.66
SREBF1-214ENST00000486311 HSF2Q03933 536 aa19.15■□□□□ 0.66
SREBF1-214ENST00000486311 LAPTM4AQ15012 233 aa19.15■□□□□ 0.66
SREBF1-214ENST00000486311 LRRC23Q53EV4 343 aaPredicted RBP19.15■□□□□ 0.66
SREBF1-214ENST00000486311 PABPC1L2AQ5JQF8 200 aa19.15■□□□□ 0.66
SREBF1-214ENST00000486311 TMEM154Q6P9G4 183 aa19.15■□□□□ 0.66
SREBF1-214ENST00000486311 PCYOX1LQ8NBM8 494 aa19.15■□□□□ 0.66
SREBF1-214ENST00000486311 CPEB3Q8NE35 698 aaKnown RBP19.15■□□□□ 0.66
SREBF1-214ENST00000486311 SNX33Q8WV41 574 aa19.15■□□□□ 0.66
SREBF1-214ENST00000486311 KCNN2Q9H2S1 579 aa19.15■□□□□ 0.66
SREBF1-214ENST00000486311 TXNIPQ9H3M7 391 aa19.15■□□□□ 0.66
SREBF1-214ENST00000486311 GID8Q9NWU2 228 aa19.15■□□□□ 0.66
SREBF1-214ENST00000486311 HIF3AQ9Y2N7 669 aa19.15■□□□□ 0.66
SREBF1-214ENST00000486311 IGKV1D-43A0A0B4J1Z2 117 aa19.14■□□□□ 0.65
SREBF1-214ENST00000486311 LOC100653049A0A140TA62 436 aa19.14■□□□□ 0.65
SREBF1-214ENST00000486311 FAM157AC9JC47 383 aa19.14■□□□□ 0.65
SREBF1-214ENST00000486311 TCF21O43680 179 aa19.14■□□□□ 0.65
SREBF1-214ENST00000486311 KRT34O76011 436 aa19.14■□□□□ 0.65
SREBF1-214ENST00000486311 NR2C1P13056 603 aa19.14■□□□□ 0.65
SREBF1-214ENST00000486311 CDAP32320 146 aa19.14■□□□□ 0.65
SREBF1-214ENST00000486311 FMODQ06828 376 aa19.14■□□□□ 0.65
SREBF1-214ENST00000486311 ST3GAL3Q11203 375 aa19.14■□□□□ 0.65
SREBF1-214ENST00000486311 TAF11Q15544 211 aa19.14■□□□□ 0.65
SREBF1-214ENST00000486311 MOGQ16653 247 aa19.14■□□□□ 0.65
SREBF1-214ENST00000486311 ALG10Q5BKT4 473 aa19.14■□□□□ 0.65
SREBF1-214ENST00000486311 RINLQ6ZS11 566 aa19.14■□□□□ 0.65
SREBF1-214ENST00000486311 OR2T12Q8NG77 320 aa19.14■□□□□ 0.65
SREBF1-214ENST00000486311 TMEM186Q96B77 213 aa19.14■□□□□ 0.65
SREBF1-214ENST00000486311 PRRC1Q96M27 445 aa19.14■□□□□ 0.65
SREBF1-214ENST00000486311 ALG12Q9BV10 488 aa19.14■□□□□ 0.65
SREBF1-214ENST00000486311 CCNB1IP1Q9NPC3 277 aa19.14■□□□□ 0.65
SREBF1-214ENST00000486311 HIF1ANQ9NWT6 349 aa19.14■□□□□ 0.65
SREBF1-214ENST00000486311 TREM2Q9NZC2 230 aa19.14■□□□□ 0.65
SREBF1-214ENST00000486311 A4GNTQ9UNA3 340 aa19.14■□□□□ 0.65
SREBF1-214ENST00000486311 PIP5K1CO60331 668 aa19.13■□□□□ 0.65
SREBF1-214ENST00000486311 IGHV3-13P01766 116 aa19.13■□□□□ 0.65
SREBF1-214ENST00000486311 MSMBP08118 114 aa19.13■□□□□ 0.65
SREBF1-214ENST00000486311 GAAP10253 952 aa19.13■□□□□ 0.65
SREBF1-214ENST00000486311 LMO4P61968 165 aa19.13■□□□□ 0.65
SREBF1-214ENST00000486311 SELENOWP63302 87 aa19.13■□□□□ 0.65
SREBF1-214ENST00000486311 CCL8P80075 99 aa19.13■□□□□ 0.65
SREBF1-214ENST00000486311 SLC25A47Q6Q0C1 308 aa19.13■□□□□ 0.65
SREBF1-214ENST00000486311 MICU2Q8IYU8 434 aa19.13■□□□□ 0.65
SREBF1-214ENST00000486311 ICA1LQ8NDH6 482 aa19.13■□□□□ 0.65
SREBF1-214ENST00000486311 NSMAFQ92636 917 aa19.13■□□□□ 0.65
SREBF1-214ENST00000486311 BPIFA2Q96DR5 249 aa19.13■□□□□ 0.65
SREBF1-214ENST00000486311 TPD52L3Q96J77 140 aa19.13■□□□□ 0.65
SREBF1-214ENST00000486311 POM121L2Q96KW2 1035 aa19.13■□□□□ 0.65
SREBF1-214ENST00000486311 DCTN3O75935 186 aa19.12■□□□□ 0.65
SREBF1-214ENST00000486311 IGHMP01871 453 aa19.12■□□□□ 0.65
SREBF1-214ENST00000486311 IFI30P13284 250 aa19.12■□□□□ 0.65
SREBF1-214ENST00000486311 ZNF32P17041 273 aa19.12■□□□□ 0.65
SREBF1-214ENST00000486311 STOMP27105 288 aa19.12■□□□□ 0.65
SREBF1-214ENST00000486311 IFNA8P32881 189 aa19.12■□□□□ 0.65
SREBF1-214ENST00000486311 CRYBB2P43320 205 aa19.12■□□□□ 0.65
SREBF1-214ENST00000486311 CD47Q08722 323 aa19.12■□□□□ 0.65
SREBF1-214ENST00000486311 FAM27BQ5VT28 67 aa19.12■□□□□ 0.65
SREBF1-214ENST00000486311 OR1J1Q8NGS3 322 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms