RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 VCX3BQ9H321 246 aa9.99□□□□□ -0.81
NUP50-216ENST00000486184 FN3KQ9H479 309 aa9.99□□□□□ -0.81
NUP50-216ENST00000486184 MOV10Q9HCE1 1003 aaKnown RBP9.99□□□□□ -0.81
NUP50-216ENST00000486184 SRA1Q9HD15 236 aaKnown RBP9.99□□□□□ -0.81
NUP50-216ENST00000486184 SLC17A5Q9NRA2 495 aa9.99□□□□□ -0.81
NUP50-216ENST00000486184 TMEM38BQ9NVV0 291 aa9.99□□□□□ -0.81
NUP50-216ENST00000486184 TVP23BQ9NYZ1 205 aa9.99□□□□□ -0.81
NUP50-216ENST00000486184 CRIM1Q9NZV1 1036 aa9.99□□□□□ -0.81
NUP50-216ENST00000486184 A0A1W2PR80 420 aa9.98□□□□□ -0.81
NUP50-216ENST00000486184 SURF4O15260 269 aa9.98□□□□□ -0.81
NUP50-216ENST00000486184 MGRN1O60291 552 aa9.98□□□□□ -0.81
NUP50-216ENST00000486184 UBL3O95164 117 aa9.98□□□□□ -0.81
NUP50-216ENST00000486184 EPXP11678 715 aa9.98□□□□□ -0.81
NUP50-216ENST00000486184 CD79AP11912 226 aa9.98□□□□□ -0.81
NUP50-216ENST00000486184 CTLA4P16410 223 aa9.98□□□□□ -0.81
NUP50-216ENST00000486184 IGFBP2P18065 325 aa9.98□□□□□ -0.81
NUP50-216ENST00000486184 PAX7P23759 505 aa9.98□□□□□ -0.81
NUP50-216ENST00000486184 LAP3P28838 519 aa9.98□□□□□ -0.81
NUP50-216ENST00000486184 CDC42P60953 191 aa9.98□□□□□ -0.81
NUP50-216ENST00000486184 MRPS34P82930 218 aaKnown RBP9.98□□□□□ -0.81
NUP50-216ENST00000486184 GLO1Q04760 184 aa9.98□□□□□ -0.81
NUP50-216ENST00000486184 CRMP1Q14194 572 aa9.98□□□□□ -0.81
NUP50-216ENST00000486184 TAB1Q15750 504 aa9.98□□□□□ -0.81
NUP50-216ENST00000486184 SLC36A2Q495M3 483 aa9.98□□□□□ -0.81
NUP50-216ENST00000486184 NRN1LQ496H8 165 aa9.98□□□□□ -0.81
NUP50-216ENST00000486184 SLX4IPQ5VYV7 408 aa9.98□□□□□ -0.81
NUP50-216ENST00000486184 ACSM5Q6NUN0 579 aa9.98□□□□□ -0.81
NUP50-216ENST00000486184 SLC16A14Q7RTX9 510 aa9.98□□□□□ -0.81
NUP50-216ENST00000486184 DPPA2Q7Z7J5 298 aa9.98□□□□□ -0.81
NUP50-216ENST00000486184 GLB1L2Q8IW92 636 aa9.98□□□□□ -0.81
NUP50-216ENST00000486184 LRRC18Q8N456 261 aa9.98□□□□□ -0.81
NUP50-216ENST00000486184 SLC22A24Q8N4F4 322 aa9.98□□□□□ -0.81
NUP50-216ENST00000486184 ZNF555Q8NEP9 628 aa9.98□□□□□ -0.81
NUP50-216ENST00000486184 OR10H5Q8NGA6 315 aa9.98□□□□□ -0.81
NUP50-216ENST00000486184 OR9Q1Q8NGQ5 310 aa9.98□□□□□ -0.81
NUP50-216ENST00000486184 NMD3Q96D46 503 aaKnown RBP9.98□□□□□ -0.81
NUP50-216ENST00000486184 RDH12Q96NR8 316 aa9.98□□□□□ -0.81
NUP50-216ENST00000486184 SLC29A1Q99808 456 aa9.98□□□□□ -0.81
NUP50-216ENST00000486184 REPIN1Q9BWE0 567 aaKnown RBP9.98□□□□□ -0.81
NUP50-216ENST00000486184 RACGAP1Q9H0H5 632 aa9.98□□□□□ -0.81
NUP50-216ENST00000486184 NELFAQ9H3P2 528 aa9.98□□□□□ -0.81
NUP50-216ENST00000486184 RNF121Q9H920 327 aa9.98□□□□□ -0.81
NUP50-216ENST00000486184 SIAEQ9HAT2 523 aa9.98□□□□□ -0.81
NUP50-216ENST00000486184 CCNB1IP1Q9NPC3 277 aa9.98□□□□□ -0.81
NUP50-216ENST00000486184 IMPAD1Q9NX62 359 aa9.98□□□□□ -0.81
NUP50-216ENST00000486184 SMPD3Q9NY59 655 aaPredicted RBP9.98□□□□□ -0.81
NUP50-216ENST00000486184 KCNN3Q9UGI6 736 aa9.98□□□□□ -0.81
NUP50-216ENST00000486184 COA3Q9Y2R0 106 aaPredicted RBP9.98□□□□□ -0.81
NUP50-216ENST00000486184 POLR1DQ9Y2S0 133 aa9.98□□□□□ -0.81
NUP50-216ENST00000486184 FKBP7Q9Y680 259 aa9.98□□□□□ -0.81
NUP50-216ENST00000486184 SPTAN1Q13813 2472 aaKnown RBP9.97□□□□□ -0.81
NUP50-216ENST00000486184 ARPC4-TTLL3A0A0A6YYG9 625 aa9.97□□□□□ -0.81
NUP50-216ENST00000486184 IGKV1D-43A0A0B4J1Z2 117 aa9.97□□□□□ -0.81
NUP50-216ENST00000486184 OR6C68A6NDL8 312 aa9.97□□□□□ -0.81
NUP50-216ENST00000486184 ZAR1LA6NP61 321 aa9.97□□□□□ -0.81
NUP50-216ENST00000486184 CASQ2O14958 399 aaPredicted RBP9.97□□□□□ -0.81
NUP50-216ENST00000486184 ATP6V1G2O95670 118 aa9.97□□□□□ -0.81
NUP50-216ENST00000486184 RAB36O95755 333 aa9.97□□□□□ -0.81
NUP50-216ENST00000486184 MSR1P21757 451 aa9.97□□□□□ -0.81
NUP50-216ENST00000486184 COL8A1P27658 744 aa9.97□□□□□ -0.81
NUP50-216ENST00000486184 CDAP32320 146 aa9.97□□□□□ -0.81
NUP50-216ENST00000486184 RPS7P62081 194 aaKnown RBP9.97□□□□□ -0.81
NUP50-216ENST00000486184 TUBA1BP68363 451 aa9.97□□□□□ -0.81
NUP50-216ENST00000486184 TUBA4AP68366 448 aa9.97□□□□□ -0.81
NUP50-216ENST00000486184 RIPK1Q13546 671 aa9.97□□□□□ -0.81
NUP50-216ENST00000486184 GSG1Q2KHT4 349 aa9.97□□□□□ -0.81
NUP50-216ENST00000486184 OGFRL1Q5TC84 451 aaPredicted RBP9.97□□□□□ -0.81
NUP50-216ENST00000486184 TMEM53Q6P2H8 277 aa9.97□□□□□ -0.81
NUP50-216ENST00000486184 TUBA1AQ71U36 451 aa9.97□□□□□ -0.81
NUP50-216ENST00000486184 ZNF627Q7L945 461 aa9.97□□□□□ -0.81
NUP50-216ENST00000486184 NPEPL1Q8NDH3 523 aa9.97□□□□□ -0.81
NUP50-216ENST00000486184 BOD1Q96IK1 185 aa9.97□□□□□ -0.81
NUP50-216ENST00000486184 FOXN4Q96NZ1 517 aa9.97□□□□□ -0.81
NUP50-216ENST00000486184 TSSK2Q96PF2 358 aa9.97□□□□□ -0.81
NUP50-216ENST00000486184 SH3GL3Q99963 347 aa9.97□□□□□ -0.81
NUP50-216ENST00000486184 TOR3AQ9H497 397 aa9.97□□□□□ -0.81
NUP50-216ENST00000486184 H2AFY2Q9P0M6 372 aaPredicted RBP9.97□□□□□ -0.81
NUP50-216ENST00000486184 NKX1-2Q9UD57 310 aaPredicted RBP9.97□□□□□ -0.81
NUP50-216ENST00000486184 B9D1Q9UPM9 204 aa9.97□□□□□ -0.81
NUP50-216ENST00000486184 ANKHD1Q8IWZ3 2542 aaKnown RBP9.96□□□□□ -0.81
NUP50-216ENST00000486184 USP9YO00507 2555 aaPredicted RBP9.96□□□□□ -0.81
NUP50-216ENST00000486184 FAM183AA6NL82 134 aa9.96□□□□□ -0.82
NUP50-216ENST00000486184 C12orf71A8MTZ7 269 aa9.96□□□□□ -0.82
NUP50-216ENST00000486184 M0R1B8 84 aa9.96□□□□□ -0.82
NUP50-216ENST00000486184 SNAP29O95721 258 aa9.96□□□□□ -0.82
NUP50-216ENST00000486184 HLA-HP01893 362 aa9.96□□□□□ -0.82
NUP50-216ENST00000486184 ZNF823P16415 610 aa9.96□□□□□ -0.82
NUP50-216ENST00000486184 SPI1P17947 270 aa9.96□□□□□ -0.82
NUP50-216ENST00000486184 CRYGSP22914 178 aa9.96□□□□□ -0.82
NUP50-216ENST00000486184 PYCR1P32322 319 aa9.96□□□□□ -0.82
NUP50-216ENST00000486184 ZNF83P51522 516 aa9.96□□□□□ -0.82
NUP50-216ENST00000486184 BLVRAP53004 296 aa9.96□□□□□ -0.82
NUP50-216ENST00000486184 SLC25A1P53007 311 aa9.96□□□□□ -0.82
NUP50-216ENST00000486184 PCBD1P61457 104 aa9.96□□□□□ -0.82
NUP50-216ENST00000486184 PIGFQ07326 219 aa9.96□□□□□ -0.82
NUP50-216ENST00000486184 ETFDHQ16134 617 aa9.96□□□□□ -0.82
NUP50-216ENST00000486184 KLHL12Q53G59 568 aa9.96□□□□□ -0.82
NUP50-216ENST00000486184 BEX5Q5H9J7 111 aa9.96□□□□□ -0.82
NUP50-216ENST00000486184 C12orf73Q69YU5 71 aa9.96□□□□□ -0.82
NUP50-216ENST00000486184 PLBD1Q6P4A8 553 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms