RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 TBC1D28Q2M2D7 210 aa15.21■□□□□ 0.03
COL6A1-204ENST00000486023 ZBED5Q49AG3 693 aa15.21■□□□□ 0.03
COL6A1-204ENST00000486023 PABPC1L2AQ5JQF8 200 aa15.21■□□□□ 0.03
COL6A1-204ENST00000486023 THEM4Q5T1C6 240 aa15.21■□□□□ 0.03
COL6A1-204ENST00000486023 C10orf128Q5T292 105 aa15.21■□□□□ 0.03
COL6A1-204ENST00000486023 SLC25A47Q6Q0C1 308 aa15.21■□□□□ 0.03
COL6A1-204ENST00000486023 DEFB107AQ8IZN7 70 aa15.21■□□□□ 0.03
COL6A1-204ENST00000486023 PGAM4Q8N0Y7 254 aa15.21■□□□□ 0.03
COL6A1-204ENST00000486023 LRRC75AQ8NAA5 344 aa15.21■□□□□ 0.03
COL6A1-204ENST00000486023 MRPL24Q96A35 216 aaKnown RBP15.21■□□□□ 0.03
COL6A1-204ENST00000486023 PYURFQ96I23 114 aa15.21■□□□□ 0.03
COL6A1-204ENST00000486023 SEPHS2Q99611 448 aa15.21■□□□□ 0.03
COL6A1-204ENST00000486023 LRMDAQ9H2I8 198 aa15.21■□□□□ 0.03
COL6A1-204ENST00000486023 REV1Q9UBZ9 1251 aa15.21■□□□□ 0.03
COL6A1-204ENST00000486023 SLC7A8Q9UHI5 535 aa15.21■□□□□ 0.03
COL6A1-204ENST00000486023 ADAM21Q9UKJ8 722 aa15.21■□□□□ 0.03
COL6A1-204ENST00000486023 AURKCQ9UQB9 309 aa15.21■□□□□ 0.03
COL6A1-204ENST00000486023 ADAM18Q9Y3Q7 739 aa15.21■□□□□ 0.03
COL6A1-204ENST00000486023 UGT2A1Q9Y4X1 527 aa15.21■□□□□ 0.03
COL6A1-204ENST00000486023 TRBV4-1A0A0J9YWV2 114 aa15.2■□□□□ 0.02
COL6A1-204ENST00000486023 A6NIZ1 184 aa15.2■□□□□ 0.02
COL6A1-204ENST00000486023 LYNX1G3V0Z9 82 aa15.2■□□□□ 0.02
COL6A1-204ENST00000486023 XKRYO14609 159 aa15.2■□□□□ 0.02
COL6A1-204ENST00000486023 CD5LO43866 347 aa15.2■□□□□ 0.02
COL6A1-204ENST00000486023 PTHP01270 115 aa15.2■□□□□ 0.02
COL6A1-204ENST00000486023 LYNX1P0DP58 116 aa15.2■□□□□ 0.02
COL6A1-204ENST00000486023 NR2C1P13056 603 aa15.2■□□□□ 0.02
COL6A1-204ENST00000486023 ZNF32P17041 273 aa15.2■□□□□ 0.02
COL6A1-204ENST00000486023 USF1P22415 310 aaPredicted RBP15.2■□□□□ 0.02
COL6A1-204ENST00000486023 LAP3P28838 519 aa15.2■□□□□ 0.02
COL6A1-204ENST00000486023 RAP1BP61224 184 aa15.2■□□□□ 0.02
COL6A1-204ENST00000486023 RPS23P62266 143 aaKnown RBP15.2■□□□□ 0.02
COL6A1-204ENST00000486023 RAP1AP62834 184 aa15.2■□□□□ 0.02
COL6A1-204ENST00000486023 FHL1Q13642 323 aa15.2■□□□□ 0.02
COL6A1-204ENST00000486023 SEC23BQ15437 767 aa15.2■□□□□ 0.02
COL6A1-204ENST00000486023 TMEM249Q2WGJ8 235 aa15.2■□□□□ 0.02
COL6A1-204ENST00000486023 SAMD4BQ5PRF9 694 aaKnown RBP15.2■□□□□ 0.02
COL6A1-204ENST00000486023 C16orf89Q6UX73 402 aa15.2■□□□□ 0.02
COL6A1-204ENST00000486023 TMPRSS11FQ6ZWK6 438 aa15.2■□□□□ 0.02
COL6A1-204ENST00000486023 DPPA2Q7Z7J5 298 aa15.2■□□□□ 0.02
COL6A1-204ENST00000486023 CPEB3Q8NE35 698 aaKnown RBP15.2■□□□□ 0.02
COL6A1-204ENST00000486023 OR1J2Q8NGS2 313 aa15.2■□□□□ 0.02
COL6A1-204ENST00000486023 AKR7LQ8NHP1 331 aa15.2■□□□□ 0.02
COL6A1-204ENST00000486023 MCUR1Q96AQ8 359 aa15.2■□□□□ 0.02
COL6A1-204ENST00000486023 C7orf34Q96L11 122 aa15.2■□□□□ 0.02
COL6A1-204ENST00000486023 Q96M85 177 aa15.2■□□□□ 0.02
COL6A1-204ENST00000486023 NSMCE2Q96MF7 247 aa15.2■□□□□ 0.02
COL6A1-204ENST00000486023 CCT8L2Q96SF2 557 aa15.2■□□□□ 0.02
COL6A1-204ENST00000486023 ALG12Q9BV10 488 aa15.2■□□□□ 0.02
COL6A1-204ENST00000486023 GORASP2Q9H8Y8 452 aa15.2■□□□□ 0.02
COL6A1-204ENST00000486023 MYEF2Q9P2K5 600 aaKnown RBP15.2■□□□□ 0.02
COL6A1-204ENST00000486023 MAGEL2Q9UJ55 1249 aa15.2■□□□□ 0.02
COL6A1-204ENST00000486023 TMEM5Q9Y2B1 443 aa15.2■□□□□ 0.02
COL6A1-204ENST00000486023 LOC390937A0A1W2PQ73 354 aa15.19■□□□□ 0.02
COL6A1-204ENST00000486023 SYNGR3O43761 229 aa15.19■□□□□ 0.02
COL6A1-204ENST00000486023 NR4A2P43354 598 aa15.19■□□□□ 0.02
COL6A1-204ENST00000486023 ERVS71-1P61550 626 aa15.19■□□□□ 0.02
COL6A1-204ENST00000486023 MRPS34P82930 218 aaKnown RBP15.19■□□□□ 0.02
COL6A1-204ENST00000486023 SPIBQ01892 262 aa15.19■□□□□ 0.02
COL6A1-204ENST00000486023 LOXL1Q08397 574 aaPredicted RBP15.19■□□□□ 0.02
COL6A1-204ENST00000486023 ANKDD1AQ495B1 522 aa15.19■□□□□ 0.02
COL6A1-204ENST00000486023 RGS7BPQ6MZT1 257 aaPredicted RBP15.19■□□□□ 0.02
COL6A1-204ENST00000486023 ARIH2OSQ8N7S6 290 aa15.19■□□□□ 0.02
COL6A1-204ENST00000486023 ZNF519Q8TB69 540 aa15.19■□□□□ 0.02
COL6A1-204ENST00000486023 NEU4Q8WWR8 484 aaPredicted RBP15.19■□□□□ 0.02
COL6A1-204ENST00000486023 NABP1Q96AH0 204 aa15.19■□□□□ 0.02
COL6A1-204ENST00000486023 NMD3Q96D46 503 aaKnown RBP15.19■□□□□ 0.02
COL6A1-204ENST00000486023 NDEL1Q9GZM8 345 aa15.19■□□□□ 0.02
COL6A1-204ENST00000486023 ANKRD19PQ9H560 264 aa15.19■□□□□ 0.02
COL6A1-204ENST00000486023 SMURF2Q9HAU4 748 aa15.19■□□□□ 0.02
COL6A1-204ENST00000486023 FBXO9Q9UK97 447 aaPredicted RBP15.19■□□□□ 0.02
COL6A1-204ENST00000486023 ANK3Q12955 4377 aaKnown RBP15.19■□□□□ 0.02
COL6A1-204ENST00000486023 A0A1W2PRQ8 180 aa15.18■□□□□ 0.02
COL6A1-204ENST00000486023 NPIPB13A6NJU9 1138 aa15.18■□□□□ 0.02
COL6A1-204ENST00000486023 B2RBV5 119 aa15.18■□□□□ 0.02
COL6A1-204ENST00000486023 NPIPB4C9JG80 1138 aa15.18■□□□□ 0.02
COL6A1-204ENST00000486023 M0R233 179 aa15.18■□□□□ 0.02
COL6A1-204ENST00000486023 ARPC2O15144 300 aa15.18■□□□□ 0.02
COL6A1-204ENST00000486023 CLPTM1O96005 669 aa15.18■□□□□ 0.02
COL6A1-204ENST00000486023 IGHMP01871 453 aa15.18■□□□□ 0.02
COL6A1-204ENST00000486023 CD14P08571 375 aa15.18■□□□□ 0.02
COL6A1-204ENST00000486023 MMP7P09237 267 aaPredicted RBP15.18■□□□□ 0.02
COL6A1-204ENST00000486023 NAT2P11245 290 aa15.18■□□□□ 0.02
COL6A1-204ENST00000486023 HSD17B1P14061 328 aa15.18■□□□□ 0.02
COL6A1-204ENST00000486023 ZNF26P17031 533 aaPredicted RBP15.18■□□□□ 0.02
COL6A1-204ENST00000486023 ITGA2P17301 1181 aa15.18■□□□□ 0.02
COL6A1-204ENST00000486023 STOMP27105 288 aa15.18■□□□□ 0.02
COL6A1-204ENST00000486023 RAD52P43351 418 aa15.18■□□□□ 0.02
COL6A1-204ENST00000486023 ZNF133P52736 654 aaPredicted RBP15.18■□□□□ 0.02
COL6A1-204ENST00000486023 SELENOVP59797 346 aa15.18■□□□□ 0.02
COL6A1-204ENST00000486023 DGCR6Q14129 220 aa15.18■□□□□ 0.02
COL6A1-204ENST00000486023 FXNQ16595 210 aa15.18■□□□□ 0.02
COL6A1-204ENST00000486023 NKPD1Q17RQ9 610 aa15.18■□□□□ 0.02
COL6A1-204ENST00000486023 NRN1LQ496H8 165 aa15.18■□□□□ 0.02
COL6A1-204ENST00000486023 OTPQ5XKR4 325 aa15.18■□□□□ 0.02
COL6A1-204ENST00000486023 FAM205BPQ63HN1 556 aa15.18■□□□□ 0.02
COL6A1-204ENST00000486023 CYP2R1Q6VVX0 501 aa15.18■□□□□ 0.02
COL6A1-204ENST00000486023 RASD2Q96D21 266 aa15.18■□□□□ 0.02
COL6A1-204ENST00000486023 RSRC1Q96IZ7 334 aaKnown RBP15.18■□□□□ 0.02
COL6A1-204ENST00000486023 ZNF570Q96NI8 536 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms