RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 GIPRP48546 466 aa10.32□□□□□ -0.76
HPS4-214ENST00000485842 CENPAP49450 140 aa10.32□□□□□ -0.76
HPS4-214ENST00000485842 CDH11P55287 796 aa10.32□□□□□ -0.76
HPS4-214ENST00000485842 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.32□□□□□ -0.76
HPS4-214ENST00000485842 DBPQ10586 325 aaPredicted RBP10.32□□□□□ -0.76
HPS4-214ENST00000485842 COX10Q12887 443 aa10.32□□□□□ -0.76
HPS4-214ENST00000485842 ETFDHQ16134 617 aa10.32□□□□□ -0.76
HPS4-214ENST00000485842 C1QTNF12Q5T7M4 302 aa10.32□□□□□ -0.76
HPS4-214ENST00000485842 ZFP1Q6P2D0 407 aa10.32□□□□□ -0.76
HPS4-214ENST00000485842 DNM1P34Q6PK57 102 aa10.32□□□□□ -0.76
HPS4-214ENST00000485842 SLC22A25Q6T423 547 aa10.32□□□□□ -0.76
HPS4-214ENST00000485842 SLC16A14Q7RTX9 510 aa10.32□□□□□ -0.76
HPS4-214ENST00000485842 CDH24Q86UP0 819 aa10.32□□□□□ -0.76
HPS4-214ENST00000485842 MYPOPQ86VE0 399 aaPredicted RBP10.32□□□□□ -0.76
HPS4-214ENST00000485842 HIPK1Q86Z02 1210 aa10.32□□□□□ -0.76
HPS4-214ENST00000485842 OR2T33Q8NG76 320 aa10.32□□□□□ -0.76
HPS4-214ENST00000485842 OR52E2Q8NGJ4 325 aa10.32□□□□□ -0.76
HPS4-214ENST00000485842 OR4Q3Q8NH05 313 aa10.32□□□□□ -0.76
HPS4-214ENST00000485842 FGFBP3Q8TAT2 258 aa10.32□□□□□ -0.76
HPS4-214ENST00000485842 AKAP1Q92667 903 aaKnown RBP eCLIP10.32□□□□□ -0.76
HPS4-214ENST00000485842 NEUROG1Q92886 237 aa10.32□□□□□ -0.76
HPS4-214ENST00000485842 NRBF2Q96F24 287 aa10.32□□□□□ -0.76
HPS4-214ENST00000485842 TSSK2Q96PF2 358 aa10.32□□□□□ -0.76
HPS4-214ENST00000485842 KCNS3Q9BQ31 491 aa10.32□□□□□ -0.76
HPS4-214ENST00000485842 TMEM204Q9BSN7 226 aa10.32□□□□□ -0.76
HPS4-214ENST00000485842 NUAK2Q9H093 628 aa10.32□□□□□ -0.76
HPS4-214ENST00000485842 FN3KQ9H479 309 aa10.32□□□□□ -0.76
HPS4-214ENST00000485842 PLEKHF2Q9H8W4 249 aa10.32□□□□□ -0.76
HPS4-214ENST00000485842 RNF121Q9H920 327 aa10.32□□□□□ -0.76
HPS4-214ENST00000485842 RPRD1BQ9NQG5 326 aaKnown RBP10.32□□□□□ -0.76
HPS4-214ENST00000485842 B3GNT2Q9NY97 397 aa10.32□□□□□ -0.76
HPS4-214ENST00000485842 ZNF224Q9NZL3 707 aa10.32□□□□□ -0.76
HPS4-214ENST00000485842 REV1Q9UBZ9 1251 aa10.32□□□□□ -0.76
HPS4-214ENST00000485842 POU2F3Q9UKI9 436 aa10.32□□□□□ -0.76
HPS4-214ENST00000485842 AKAP6Q13023 2319 aa10.32□□□□□ -0.76
HPS4-214ENST00000485842 HEATR1Q9H583 2144 aaKnown RBP10.31□□□□□ -0.76
HPS4-214ENST00000485842 SHISA9B4DS77 424 aa10.31□□□□□ -0.76
HPS4-214ENST00000485842 G3V2T6 193 aa10.31□□□□□ -0.76
HPS4-214ENST00000485842 H3BNX3 289 aa10.31□□□□□ -0.76
HPS4-214ENST00000485842 KHDRBS3O75525 346 aaKnown RBP10.31□□□□□ -0.76
HPS4-214ENST00000485842 CECR9P0C854 216 aa10.31□□□□□ -0.76
HPS4-214ENST00000485842 NPR2P20594 1047 aa10.31□□□□□ -0.76
HPS4-214ENST00000485842 ARR3P36575 388 aa10.31□□□□□ -0.76
HPS4-214ENST00000485842 RAB1AP62820 205 aa10.31□□□□□ -0.76
HPS4-214ENST00000485842 PGGHGQ32M88 737 aa10.31□□□□□ -0.76
HPS4-214ENST00000485842 SLC36A2Q495M3 483 aa10.31□□□□□ -0.76
HPS4-214ENST00000485842 OTPQ5XKR4 325 aa10.31□□□□□ -0.76
HPS4-214ENST00000485842 TMEM53Q6P2H8 277 aa10.31□□□□□ -0.76
HPS4-214ENST00000485842 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.31□□□□□ -0.76
HPS4-214ENST00000485842 ZDHHC13Q8IUH4 622 aa10.31□□□□□ -0.76
HPS4-214ENST00000485842 C10orf67Q8IYJ2 551 aa10.31□□□□□ -0.76
HPS4-214ENST00000485842 LNX2Q8N448 690 aa10.31□□□□□ -0.76
HPS4-214ENST00000485842 PIP4P2Q8N4L2 257 aa10.31□□□□□ -0.76
HPS4-214ENST00000485842 CYB561A3Q8NBI2 242 aa10.31□□□□□ -0.76
HPS4-214ENST00000485842 NABP1Q96AH0 204 aa10.31□□□□□ -0.76
HPS4-214ENST00000485842 CENPNQ96H22 339 aaPredicted RBP10.31□□□□□ -0.76
HPS4-214ENST00000485842 MS4A3Q96HJ5 214 aa10.31□□□□□ -0.76
HPS4-214ENST00000485842 PKP2Q99959 881 aa10.31□□□□□ -0.76
HPS4-214ENST00000485842 KCNN2Q9H2S1 579 aa10.31□□□□□ -0.76
HPS4-214ENST00000485842 SIAEQ9HAT2 523 aa10.31□□□□□ -0.76
HPS4-214ENST00000485842 MOV10Q9HCE1 1003 aaKnown RBP10.31□□□□□ -0.76
HPS4-214ENST00000485842 EMC7Q9NPA0 242 aa10.31□□□□□ -0.76
HPS4-214ENST00000485842 CCNB1IP1Q9NPC3 277 aa10.31□□□□□ -0.76
HPS4-214ENST00000485842 PAPOLBQ9NRJ5 636 aaKnown RBP10.31□□□□□ -0.76
HPS4-214ENST00000485842 CRNNQ9UBG3 495 aaPredicted RBP10.31□□□□□ -0.76
HPS4-214ENST00000485842 MOKQ9UQ07 419 aa10.31□□□□□ -0.76
HPS4-214ENST00000485842 BAIAP2Q9UQB8 552 aa10.31□□□□□ -0.76
HPS4-214ENST00000485842 PLEKHA6Q9Y2H5 1048 aa10.31□□□□□ -0.76
HPS4-214ENST00000485842 COA3Q9Y2R0 106 aaPredicted RBP10.31□□□□□ -0.76
HPS4-214ENST00000485842 POLQO75417 2590 aa10.3□□□□□ -0.76
HPS4-214ENST00000485842 NOTCH2Q04721 2471 aa10.3□□□□□ -0.76
HPS4-214ENST00000485842 OR6C68A6NDL8 312 aa10.3□□□□□ -0.76
HPS4-214ENST00000485842 RIIAD1A6NNX1 92 aa10.3□□□□□ -0.76
HPS4-214ENST00000485842 DCTN6O00399 190 aa10.3□□□□□ -0.76
HPS4-214ENST00000485842 HS3ST1O14792 307 aa10.3□□□□□ -0.76
HPS4-214ENST00000485842 MITFO75030 526 aaPredicted RBP10.3□□□□□ -0.76
HPS4-214ENST00000485842 IGKV3-15P01624 115 aa10.3□□□□□ -0.76
HPS4-214ENST00000485842 IGLV1-44P01699 117 aa10.3□□□□□ -0.76
HPS4-214ENST00000485842 CRYAAP02489 173 aa10.3□□□□□ -0.76
HPS4-214ENST00000485842 OSMP13725 252 aa10.3□□□□□ -0.76
HPS4-214ENST00000485842 MSR1P21757 451 aa10.3□□□□□ -0.76
HPS4-214ENST00000485842 PAX7P23759 505 aa10.3□□□□□ -0.76
HPS4-214ENST00000485842 LAP3P28838 519 aa10.3□□□□□ -0.76
HPS4-214ENST00000485842 DAPP51397 102 aa10.3□□□□□ -0.76
HPS4-214ENST00000485842 NAAAQ02083 359 aa10.3□□□□□ -0.76
HPS4-214ENST00000485842 RAB39AQ14964 217 aa10.3□□□□□ -0.76
HPS4-214ENST00000485842 NRN1LQ496H8 165 aa10.3□□□□□ -0.76
HPS4-214ENST00000485842 ZNF672Q499Z4 452 aaPredicted RBP10.3□□□□□ -0.76
HPS4-214ENST00000485842 FAHD1Q6P587 224 aa10.3□□□□□ -0.76
HPS4-214ENST00000485842 PAMR1Q6UXH9 720 aa10.3□□□□□ -0.76
HPS4-214ENST00000485842 FOXL2NBQ6ZUU3 175 aa10.3□□□□□ -0.76
HPS4-214ENST00000485842 DEPDC4Q8N2C3 294 aa10.3□□□□□ -0.76
HPS4-214ENST00000485842 SVOPLQ8N434 492 aa10.3□□□□□ -0.76
HPS4-214ENST00000485842 SLC37A3Q8NCC5 494 aa10.3□□□□□ -0.76
HPS4-214ENST00000485842 OR9Q1Q8NGQ5 310 aa10.3□□□□□ -0.76
HPS4-214ENST00000485842 LILRB1Q8NHL6 650 aaPredicted RBP10.3□□□□□ -0.76
HPS4-214ENST00000485842 DNAJC9Q8WXX5 260 aa10.3□□□□□ -0.76
HPS4-214ENST00000485842 STMN2Q93045 179 aa10.3□□□□□ -0.76
HPS4-214ENST00000485842 SNX18Q96RF0 628 aa10.3□□□□□ -0.76
HPS4-214ENST00000485842 GABARAPL1Q9H0R8 117 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms