RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 NPHS2Q9NP85 383 aa16.39■□□□□ 0.21
COL27A1-205ENST00000485397 G6PC2Q9NQR9 355 aa16.39■□□□□ 0.21
COL27A1-205ENST00000485397 UGT2A1Q9Y4X1 527 aa16.39■□□□□ 0.21
COL27A1-205ENST00000485397 IGHV1-69-2A0A0G2JMI3 117 aa16.38■□□□□ 0.21
COL27A1-205ENST00000485397 CENPBD1B2RD01 187 aa16.38■□□□□ 0.21
COL27A1-205ENST00000485397 TPD52L2O43399 206 aaKnown RBP16.38■□□□□ 0.21
COL27A1-205ENST00000485397 PNPP00491 289 aa16.38■□□□□ 0.21
COL27A1-205ENST00000485397 ZNF32P17041 273 aa16.38■□□□□ 0.21
COL27A1-205ENST00000485397 DRD4P21917 467 aa16.38■□□□□ 0.21
COL27A1-205ENST00000485397 DAP3P51398 398 aaKnown RBP16.38■□□□□ 0.21
COL27A1-205ENST00000485397 FMODQ06828 376 aa16.38■□□□□ 0.21
COL27A1-205ENST00000485397 PIN1Q13526 163 aaPredicted RBP16.38■□□□□ 0.21
COL27A1-205ENST00000485397 LAPTM4AQ15012 233 aa16.38■□□□□ 0.21
COL27A1-205ENST00000485397 ACSM5Q6NUN0 579 aa16.38■□□□□ 0.21
COL27A1-205ENST00000485397 TMEM239Q8WW34 195 aa16.38■□□□□ 0.21
COL27A1-205ENST00000485397 NSMAFQ92636 917 aa16.38■□□□□ 0.21
COL27A1-205ENST00000485397 HDAC2Q92769 488 aaKnown RBP16.38■□□□□ 0.21
COL27A1-205ENST00000485397 NABP1Q96AH0 204 aa16.38■□□□□ 0.21
COL27A1-205ENST00000485397 NMD3Q96D46 503 aaKnown RBP16.38■□□□□ 0.21
COL27A1-205ENST00000485397 SIAEQ9HAT2 523 aa16.38■□□□□ 0.21
COL27A1-205ENST00000485397 DECR2Q9NUI1 292 aa16.38■□□□□ 0.21
COL27A1-205ENST00000485397 RIMS3Q9UJD0 308 aa16.38■□□□□ 0.21
COL27A1-205ENST00000485397 LOC105371242A0A075B767 164 aa16.37■□□□□ 0.21
COL27A1-205ENST00000485397 A0A0G2JND7 137 aa16.37■□□□□ 0.21
COL27A1-205ENST00000485397 PLPP2O43688 288 aa16.37■□□□□ 0.21
COL27A1-205ENST00000485397 MGRN1O60291 552 aa16.37■□□□□ 0.21
COL27A1-205ENST00000485397 DEAF1O75398 565 aaPredicted RBP16.37■□□□□ 0.21
COL27A1-205ENST00000485397 OR5F1O95221 314 aa16.37■□□□□ 0.21
COL27A1-205ENST00000485397 MPZL1O95297 269 aa16.37■□□□□ 0.21
COL27A1-205ENST00000485397 IGHV3-13P01766 116 aa16.37■□□□□ 0.21
COL27A1-205ENST00000485397 STOMP27105 288 aa16.37■□□□□ 0.21
COL27A1-205ENST00000485397 CFPP27918 469 aa16.37■□□□□ 0.21
COL27A1-205ENST00000485397 WNT5AP41221 380 aa16.37■□□□□ 0.21
COL27A1-205ENST00000485397 RBM34P42696 430 aaKnown RBP16.37■□□□□ 0.21
COL27A1-205ENST00000485397 OR1E2P47887 323 aa16.37■□□□□ 0.21
COL27A1-205ENST00000485397 MRPS34P82930 218 aaKnown RBP16.37■□□□□ 0.21
COL27A1-205ENST00000485397 TEKQ02763 1124 aa16.37■□□□□ 0.21
COL27A1-205ENST00000485397 SGCAQ16586 387 aa16.37■□□□□ 0.21
COL27A1-205ENST00000485397 MMEL1Q495T6 779 aa16.37■□□□□ 0.21
COL27A1-205ENST00000485397 TMEM255AQ5JRV8 349 aa16.37■□□□□ 0.21
COL27A1-205ENST00000485397 SPATA46Q5T0L3 261 aa16.37■□□□□ 0.21
COL27A1-205ENST00000485397 CALHM3Q86XJ0 350 aa16.37■□□□□ 0.21
COL27A1-205ENST00000485397 ZNF101Q8IZC7 436 aa16.37■□□□□ 0.21
COL27A1-205ENST00000485397 ZNF418Q8TF45 676 aaPredicted RBP16.37■□□□□ 0.21
COL27A1-205ENST00000485397 ZFAND2BQ8WV99 257 aa16.37■□□□□ 0.21
COL27A1-205ENST00000485397 POM121L2Q96KW2 1035 aa16.37■□□□□ 0.21
COL27A1-205ENST00000485397 KCNN2Q9H2S1 579 aa16.37■□□□□ 0.21
COL27A1-205ENST00000485397 CCNB1IP1Q9NPC3 277 aa16.37■□□□□ 0.21
COL27A1-205ENST00000485397 WIPI2Q9Y4P8 454 aa16.37■□□□□ 0.21
COL27A1-205ENST00000485397 LOC100509620A0A075B734 347 aa16.36■□□□□ 0.21
COL27A1-205ENST00000485397 SPRY3O43610 288 aa16.36■□□□□ 0.21
COL27A1-205ENST00000485397 PIP5K1CO60331 668 aa16.36■□□□□ 0.21
COL27A1-205ENST00000485397 EDF1O60869 148 aaKnown RBP16.36■□□□□ 0.21
COL27A1-205ENST00000485397 VIMP08670 466 aaKnown RBP16.36■□□□□ 0.21
COL27A1-205ENST00000485397 TSPAN19P0C672 248 aa16.36■□□□□ 0.21
COL27A1-205ENST00000485397 ANPEPP15144 967 aa16.36■□□□□ 0.21
COL27A1-205ENST00000485397 MAKP20794 623 aa16.36■□□□□ 0.21
COL27A1-205ENST00000485397 MPV17P39210 176 aa16.36■□□□□ 0.21
COL27A1-205ENST00000485397 ZNF81P51508 661 aa16.36■□□□□ 0.21
COL27A1-205ENST00000485397 CYLC2Q14093 348 aaPredicted RBP16.36■□□□□ 0.21
COL27A1-205ENST00000485397 MOGQ16653 247 aa16.36■□□□□ 0.21
COL27A1-205ENST00000485397 THEM4Q5T1C6 240 aa16.36■□□□□ 0.21
COL27A1-205ENST00000485397 SLC25A47Q6Q0C1 308 aa16.36■□□□□ 0.21
COL27A1-205ENST00000485397 HDDC2Q7Z4H3 204 aa16.36■□□□□ 0.21
COL27A1-205ENST00000485397 AKR7LQ8NHP1 331 aa16.36■□□□□ 0.21
COL27A1-205ENST00000485397 LIPHQ8WWY8 451 aa16.36■□□□□ 0.21
COL27A1-205ENST00000485397 ECSITQ9BQ95 431 aa16.36■□□□□ 0.21
COL27A1-205ENST00000485397 TMPRSS13Q9BYE2 586 aa16.36■□□□□ 0.21
COL27A1-205ENST00000485397 SAP30LQ9HAJ7 183 aa16.36■□□□□ 0.21
COL27A1-205ENST00000485397 BAG5Q9UL15 447 aa16.36■□□□□ 0.21
COL27A1-205ENST00000485397 C5orf49A4QMS7 147 aa16.35■□□□□ 0.21
COL27A1-205ENST00000485397 CLDN25C9JDP6 229 aa16.35■□□□□ 0.21
COL27A1-205ENST00000485397 FXYD1O00168 92 aa16.35■□□□□ 0.21
COL27A1-205ENST00000485397 IGF2P01344 180 aa16.35■□□□□ 0.21
COL27A1-205ENST00000485397 IGHV1-46P01743 117 aa16.35■□□□□ 0.21
COL27A1-205ENST00000485397 IGHV2-5P01817 119 aa16.35■□□□□ 0.21
COL27A1-205ENST00000485397 EPHA1P21709 976 aa16.35■□□□□ 0.21
COL27A1-205ENST00000485397 ERVK-25P63136 954 aa16.35■□□□□ 0.21
COL27A1-205ENST00000485397 PSG4Q00888 419 aa16.35■□□□□ 0.21
COL27A1-205ENST00000485397 CD47Q08722 323 aa16.35■□□□□ 0.21
COL27A1-205ENST00000485397 TOP3AQ13472 1001 aaPredicted RBP16.35■□□□□ 0.21
COL27A1-205ENST00000485397 HFEQ30201 348 aa16.35■□□□□ 0.21
COL27A1-205ENST00000485397 ZNF718Q3SXZ3 478 aa16.35■□□□□ 0.21
COL27A1-205ENST00000485397 CLDN22Q8N7P3 220 aa16.35■□□□□ 0.21
COL27A1-205ENST00000485397 SLC25A40Q8TBP6 338 aa16.35■□□□□ 0.21
COL27A1-205ENST00000485397 IPCEF1Q8WWN9 437 aaPredicted RBP16.35■□□□□ 0.21
COL27A1-205ENST00000485397 LRRC58Q96CX6 371 aa16.35■□□□□ 0.21
COL27A1-205ENST00000485397 RAB39BQ96DA2 213 aa16.35■□□□□ 0.21
COL27A1-205ENST00000485397 MARS2Q96GW9 593 aaKnown RBP16.35■□□□□ 0.21
COL27A1-205ENST00000485397 STX18Q9P2W9 335 aaKnown RBP16.35■□□□□ 0.21
COL27A1-205ENST00000485397 PCDHB10Q9UN67 800 aa16.35■□□□□ 0.21
COL27A1-205ENST00000485397 MED31Q9Y3C7 131 aa16.35■□□□□ 0.21
COL27A1-205ENST00000485397 MT-ND5P03915 603 aa16.34■□□□□ 0.21
COL27A1-205ENST00000485397 GCH1P30793 250 aa16.34■□□□□ 0.21
COL27A1-205ENST00000485397 GDI2P50395 445 aaKnown RBP16.34■□□□□ 0.21
COL27A1-205ENST00000485397 MMP15P51511 669 aa16.34■□□□□ 0.21
COL27A1-205ENST00000485397 ACTG1P63261 375 aa16.34■□□□□ 0.21
COL27A1-205ENST00000485397 SCGB2A2Q13296 93 aa16.34■□□□□ 0.21
COL27A1-205ENST00000485397 METTL21CQ5VZV1 264 aa16.34■□□□□ 0.21
COL27A1-205ENST00000485397 ZNF771Q7L3S4 317 aaPredicted RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms