RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 DLEU7Q6UYE1 221 aa11.08□□□□□ -0.64
HDAC6-227ENST00000485102 SLC35D2Q76EJ3 337 aa11.08□□□□□ -0.64
HDAC6-227ENST00000485102 RANBP3LQ86VV4 465 aaPredicted RBP11.08□□□□□ -0.64
HDAC6-227ENST00000485102 C10orf111Q8N326 155 aa11.08□□□□□ -0.64
HDAC6-227ENST00000485102 PAQR4Q8N4S7 273 aaPredicted RBP11.08□□□□□ -0.64
HDAC6-227ENST00000485102 OR1J2Q8NGS2 313 aa11.08□□□□□ -0.64
HDAC6-227ENST00000485102 RAB1CQ92928 201 aa11.08□□□□□ -0.64
HDAC6-227ENST00000485102 ZNF566Q969W8 418 aa11.08□□□□□ -0.64
HDAC6-227ENST00000485102 WFDC6Q9BQY6 131 aa11.08□□□□□ -0.64
HDAC6-227ENST00000485102 ZNF747Q9BV97 191 aa11.08□□□□□ -0.64
HDAC6-227ENST00000485102 C1orf21Q9H246 121 aa11.08□□□□□ -0.64
HDAC6-227ENST00000485102 NTN4Q9HB63 628 aa11.08□□□□□ -0.64
HDAC6-227ENST00000485102 SPAG4Q9NPE6 437 aa11.08□□□□□ -0.64
HDAC6-227ENST00000485102 ESM1Q9NQ30 184 aa11.08□□□□□ -0.64
HDAC6-227ENST00000485102 TAS2R5Q9NYW4 299 aa11.08□□□□□ -0.64
HDAC6-227ENST00000485102 ANGPT4Q9Y264 503 aa11.08□□□□□ -0.64
HDAC6-227ENST00000485102 WIPI2Q9Y4P8 454 aa11.08□□□□□ -0.64
HDAC6-227ENST00000485102 CLDN25C9JDP6 229 aa11.07□□□□□ -0.64
HDAC6-227ENST00000485102 KCNAB3O43448 404 aa11.07□□□□□ -0.64
HDAC6-227ENST00000485102 CDC14BO60729 498 aa11.07□□□□□ -0.64
HDAC6-227ENST00000485102 RGS9O75916 674 aaPredicted RBP11.07□□□□□ -0.64
HDAC6-227ENST00000485102 OR6A2O95222 327 aa11.07□□□□□ -0.64
HDAC6-227ENST00000485102 MT-ND5P03915 603 aa11.07□□□□□ -0.64
HDAC6-227ENST00000485102 ADH4P08319 380 aa11.07□□□□□ -0.64
HDAC6-227ENST00000485102 FAM157BP0CG42 384 aa11.07□□□□□ -0.64
HDAC6-227ENST00000485102 PGA4P0DJD7 388 aa11.07□□□□□ -0.64
HDAC6-227ENST00000485102 PGA3P0DJD8 388 aa11.07□□□□□ -0.64
HDAC6-227ENST00000485102 FPR2P25090 351 aa11.07□□□□□ -0.64
HDAC6-227ENST00000485102 NUDT2P50583 147 aa11.07□□□□□ -0.64
HDAC6-227ENST00000485102 ZNF133P52736 654 aaPredicted RBP11.07□□□□□ -0.64
HDAC6-227ENST00000485102 MVKQ03426 396 aa11.07□□□□□ -0.64
HDAC6-227ENST00000485102 FOXL1Q12952 345 aa11.07□□□□□ -0.64
HDAC6-227ENST00000485102 SCARB2Q14108 478 aa11.07□□□□□ -0.64
HDAC6-227ENST00000485102 ZNF74Q16587 644 aa11.07□□□□□ -0.64
HDAC6-227ENST00000485102 CYP51A1Q16850 503 aa11.07□□□□□ -0.64
HDAC6-227ENST00000485102 TBC1D28Q2M2D7 210 aa11.07□□□□□ -0.64
HDAC6-227ENST00000485102 SLC36A2Q495M3 483 aa11.07□□□□□ -0.64
HDAC6-227ENST00000485102 DCAF12L2Q5VW00 463 aa11.07□□□□□ -0.64
HDAC6-227ENST00000485102 C1orf174Q8IYL3 243 aa11.07□□□□□ -0.64
HDAC6-227ENST00000485102 FITM2Q8N6M3 262 aa11.07□□□□□ -0.64
HDAC6-227ENST00000485102 C11orf65Q8NCR3 313 aa11.07□□□□□ -0.64
HDAC6-227ENST00000485102 DVL3Q92997 716 aaPredicted RBP11.07□□□□□ -0.64
HDAC6-227ENST00000485102 RCN3Q96D15 328 aa11.07□□□□□ -0.64
HDAC6-227ENST00000485102 TIMD4Q96H15 378 aa11.07□□□□□ -0.64
HDAC6-227ENST00000485102 TSPAN32Q96QS1 320 aa11.07□□□□□ -0.64
HDAC6-227ENST00000485102 SEPHS2Q99611 448 aa11.07□□□□□ -0.64
HDAC6-227ENST00000485102 SH3GL3Q99963 347 aa11.07□□□□□ -0.64
HDAC6-227ENST00000485102 ZNF426Q9BUY5 554 aa11.07□□□□□ -0.64
HDAC6-227ENST00000485102 SLC19A3Q9BZV2 496 aa11.07□□□□□ -0.64
HDAC6-227ENST00000485102 LRMDAQ9H2I8 198 aa11.07□□□□□ -0.64
HDAC6-227ENST00000485102 CDH20Q9HBT6 801 aa11.07□□□□□ -0.64
HDAC6-227ENST00000485102 VAPAQ9P0L0 249 aa11.07□□□□□ -0.64
HDAC6-227ENST00000485102 SLAMF8Q9P0V8 285 aa11.07□□□□□ -0.64
HDAC6-227ENST00000485102 OPN4Q9UHM6 478 aa11.07□□□□□ -0.64
HDAC6-227ENST00000485102 SLC13A4Q9UKG4 626 aa11.07□□□□□ -0.64
HDAC6-227ENST00000485102 C11orf98E9PRG8 122 aa11.06□□□□□ -0.64
HDAC6-227ENST00000485102 EBAG9O00559 213 aa11.06□□□□□ -0.64
HDAC6-227ENST00000485102 FBP2O00757 339 aa11.06□□□□□ -0.64
HDAC6-227ENST00000485102 LCKP06239 509 aa11.06□□□□□ -0.64
HDAC6-227ENST00000485102 MMP7P09237 267 aaPredicted RBP11.06□□□□□ -0.64
HDAC6-227ENST00000485102 HKR1P10072 659 aa11.06□□□□□ -0.64
HDAC6-227ENST00000485102 PCBP3P57721 371 aaKnown RBP11.06□□□□□ -0.64
HDAC6-227ENST00000485102 UBA52P62987 128 aaKnown RBP11.06□□□□□ -0.64
HDAC6-227ENST00000485102 PLP2Q04941 152 aa11.06□□□□□ -0.64
HDAC6-227ENST00000485102 HFEQ30201 348 aa11.06□□□□□ -0.64
HDAC6-227ENST00000485102 DNAL1Q4LDG9 190 aa11.06□□□□□ -0.64
HDAC6-227ENST00000485102 AVPI1Q5T686 147 aa11.06□□□□□ -0.64
HDAC6-227ENST00000485102 NANOGP8Q6NSW7 305 aa11.06□□□□□ -0.64
HDAC6-227ENST00000485102 SHISA2Q6UWI4 295 aa11.06□□□□□ -0.64
HDAC6-227ENST00000485102 USP51Q70EK9 711 aa11.06□□□□□ -0.64
HDAC6-227ENST00000485102 SLC16A14Q7RTX9 510 aa11.06□□□□□ -0.64
HDAC6-227ENST00000485102 RETREG3Q86VR2 466 aa11.06□□□□□ -0.64
HDAC6-227ENST00000485102 ARMC8Q8IUR7 673 aa11.06□□□□□ -0.64
HDAC6-227ENST00000485102 PGAM4Q8N0Y7 254 aa11.06□□□□□ -0.64
HDAC6-227ENST00000485102 BPIFB2Q8N4F0 458 aa11.06□□□□□ -0.64
HDAC6-227ENST00000485102 C10orf53Q8N6V4 93 aa11.06□□□□□ -0.64
HDAC6-227ENST00000485102 HIPK4Q8NE63 616 aa11.06□□□□□ -0.64
HDAC6-227ENST00000485102 OR4K5Q8NGD3 323 aa11.06□□□□□ -0.64
HDAC6-227ENST00000485102 RNF217Q8TC41 542 aa11.06□□□□□ -0.64
HDAC6-227ENST00000485102 ELMOD3Q96FG2 381 aa11.06□□□□□ -0.64
HDAC6-227ENST00000485102 MPP4Q96JB8 637 aa11.06□□□□□ -0.64
HDAC6-227ENST00000485102 MCHR1Q99705 422 aa11.06□□□□□ -0.64
HDAC6-227ENST00000485102 SLC6A7Q99884 636 aa11.06□□□□□ -0.64
HDAC6-227ENST00000485102 CPPED1Q9BRF8 314 aaPredicted RBP11.06□□□□□ -0.64
HDAC6-227ENST00000485102 MRPL13Q9BYD1 178 aaKnown RBP11.06□□□□□ -0.64
HDAC6-227ENST00000485102 C7orf69Q9H7B7 122 aa11.06□□□□□ -0.64
HDAC6-227ENST00000485102 NANOGQ9H9S0 305 aa11.06□□□□□ -0.64
HDAC6-227ENST00000485102 SAP30LQ9HAJ7 183 aa11.06□□□□□ -0.64
HDAC6-227ENST00000485102 NANSQ9NR45 359 aa11.06□□□□□ -0.64
HDAC6-227ENST00000485102 DECR2Q9NUI1 292 aa11.06□□□□□ -0.64
HDAC6-227ENST00000485102 DDX28Q9NUL7 540 aaKnown RBP11.06□□□□□ -0.64
HDAC6-227ENST00000485102 ZNF229Q9UJW7 825 aa11.06□□□□□ -0.64
HDAC6-227ENST00000485102 POLR3KQ9Y2Y1 108 aaPredicted RBP11.06□□□□□ -0.64
HDAC6-227ENST00000485102 IQCMA0A1B0GVH7 501 aa11.05□□□□□ -0.64
HDAC6-227ENST00000485102 TMPRSS2O15393 492 aa11.05□□□□□ -0.64
HDAC6-227ENST00000485102 SERPINI2O75830 405 aa11.05□□□□□ -0.64
HDAC6-227ENST00000485102 UBOX5O94941 541 aa11.05□□□□□ -0.64
HDAC6-227ENST00000485102 PRSS23O95084 383 aa11.05□□□□□ -0.64
HDAC6-227ENST00000485102 LYPD3O95274 346 aa11.05□□□□□ -0.64
HDAC6-227ENST00000485102 QDPRP09417 244 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms